data_2YM9
#
_model_server_result.job_id            y3jf2IPIAR4xiCh3pX_Q-A 
_model_server_result.datetime_utc      '2024-11-22 18:09:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2ym9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":1338}' 
#
_entry.id    2YM9 
#
_exptl.entry_id    2YM9 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              96.063 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SULFATE ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            2YM9 
_cell.length_a            128.37 
_cell.length_b            128.37 
_cell.length_c            350.082 
_cell.Z_PDB               48 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 2YM9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
PISA tetrameric 4 software_defined_assembly 5 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,G,J 1 1 
B,H,I,K 2 1 
C,L 3 1 
D,M 4 1 
A,B,C,D,E,F,G,H,I,J,K,L,M 5 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 H N N 
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_chem_comp.formula           'O4 S -2' 
_chem_comp.formula_weight    96.063 
_chem_comp.id                SO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SULFATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O1 SO4 doub 303 n n 
S O2 SO4 doub 304 n n 
S O3 SO4 sing 305 n n 
S O4 SO4 sing 306 n n 
#
_atom_sites.entry_id                     2YM9 
_atom_sites.fract_transf_matrix[1][1]    0.00779 
_atom_sites.fract_transf_matrix[1][2]    0.004498 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008995 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.002856 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 SO4 A 1 1340 1340 SO4 SO4 . 
F 2 SO4 A 1 1341 1341 SO4 SO4 . 
G 3 GOL A 1 1342 1342 GOL GOL . 
H 2 SO4 B 1 1338 1338 SO4 SO4 . 
I 3 GOL B 1 1339 1339 GOL GOL . 
J 4 HOH A 1 2001 2001 HOH HOH . 
J 4 HOH A 2 2002 2002 HOH HOH . 
J 4 HOH A 3 2003 2003 HOH HOH . 
J 4 HOH A 4 2004 2004 HOH HOH . 
J 4 HOH A 5 2005 2005 HOH HOH . 
J 4 HOH A 6 2006 2006 HOH HOH . 
J 4 HOH A 7 2007 2007 HOH HOH . 
J 4 HOH A 8 2008 2008 HOH HOH . 
J 4 HOH A 9 2009 2009 HOH HOH . 
J 4 HOH A 10 2010 2010 HOH HOH . 
J 4 HOH A 11 2011 2011 HOH HOH . 
J 4 HOH A 12 2012 2012 HOH HOH . 
J 4 HOH A 13 2013 2013 HOH HOH . 
J 4 HOH A 14 2014 2014 HOH HOH . 
J 4 HOH A 15 2015 2015 HOH HOH . 
K 4 HOH B 1 2001 2001 HOH HOH . 
K 4 HOH B 2 2002 2002 HOH HOH . 
K 4 HOH B 3 2003 2003 HOH HOH . 
K 4 HOH B 4 2004 2004 HOH HOH . 
K 4 HOH B 5 2005 2005 HOH HOH . 
K 4 HOH B 6 2006 2006 HOH HOH . 
K 4 HOH B 7 2007 2007 HOH HOH . 
K 4 HOH B 8 2008 2008 HOH HOH . 
K 4 HOH B 9 2009 2009 HOH HOH . 
K 4 HOH B 10 2010 2010 HOH HOH . 
L 4 HOH C 1 2001 2001 HOH HOH . 
L 4 HOH C 2 2002 2002 HOH HOH . 
L 4 HOH C 3 2003 2003 HOH HOH . 
L 4 HOH C 4 2004 2004 HOH HOH . 
L 4 HOH C 5 2005 2005 HOH HOH . 
L 4 HOH C 6 2006 2006 HOH HOH . 
L 4 HOH C 7 2007 2007 HOH HOH . 
L 4 HOH C 8 2008 2008 HOH HOH . 
L 4 HOH C 9 2009 2009 HOH HOH . 
L 4 HOH C 10 2010 2010 HOH HOH . 
L 4 HOH C 11 2011 2011 HOH HOH . 
M 4 HOH D 1 2001 2001 HOH HOH . 
M 4 HOH D 2 2002 2002 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S SO4 . . . H 2 22.208 -65.009 -22.377 0.65 97.78 ? S SO4 1338 B 1 
HETATM 2 O O1 SO4 . . . H 2 22.199 -65.586 -23.74 0.65 91.59 ? O1 SO4 1338 B 1 
HETATM 3 O O2 SO4 . . . H 2 22.781 -65.988 -21.423 0.65 93.85 ? O2 SO4 1338 B 1 
HETATM 4 O O3 SO4 . . . H 2 20.819 -64.692 -21.985 0.65 88.57 ? O3 SO4 1338 B 1 
HETATM 5 O O4 SO4 . . . H 2 23.024 -63.774 -22.364 0.65 90.31 ? O4 SO4 1338 B 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           246 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           5 
#