data_2YOE
#
_model_server_result.job_id            zeAwAABJXo63Pa82a6hxEA 
_model_server_result.datetime_utc      '2024-11-28 12:10:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2yoe 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":1318}' 
#
_entry.id    2YOE 
#
_exptl.entry_id    2YOE 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              103.12 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'GAMMA-AMINO-BUTANOIC ACID' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          108.82 
_cell.angle_gamma         90 
_cell.entry_id            2YOE 
_cell.length_a            105.771 
_cell.length_b            266.512 
_cell.length_c            110.982 
_cell.Z_PDB               20 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2YOE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA pentameric 5 author_and_software_defined_assembly 1 
PISA pentameric 5 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
F,G,H,I,J,M 1 1 
A,B,C,D,E,K,L 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 K N N 
? 2 M N N 
#
_chem_comp.formula           'C4 H9 N O2' 
_chem_comp.formula_weight    103.12 
_chem_comp.id                ABU 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'GAMMA-AMINO-BUTANOIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'GAMMA(AMINO)-BUTYRIC ACID' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CD ABU sing 1 n n 
N H ABU sing 2 n n 
N H2 ABU sing 3 n n 
CD CB ABU sing 4 n n 
CD HA1 ABU sing 5 n n 
CD HA2 ABU sing 6 n n 
CB CG ABU sing 7 n n 
CB HB1 ABU sing 8 n n 
CB HB2 ABU sing 9 n n 
CG C ABU sing 10 n n 
CG HG1 ABU sing 11 n n 
CG HG2 ABU sing 12 n n 
C O ABU doub 13 n n 
C OXT ABU sing 14 n n 
OXT HXT ABU sing 15 n n 
#
_atom_sites.entry_id                     2YOE 
_atom_sites.fract_transf_matrix[1][1]    0.009454 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003222 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.003752 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009519 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
K 2 ABU B 1 1318 1318 ABU ABU . 
L 3 FL7 C 1 1318 1318 FL7 FL7 . 
M 2 ABU I 1 1318 1318 ABU ABU . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N ABU . . . M 2 -105.736 -101.664 -56.948 1 121.42 ? N ABU 1318 I 1 
HETATM 2 C CD ABU . . . M 2 -105.985 -102.183 -58.221 1 135.45 ? CD ABU 1318 I 1 
HETATM 3 C CB ABU . . . M 2 -104.801 -102.843 -58.829 1 137.48 ? CB ABU 1318 I 1 
HETATM 4 C CG ABU . . . M 2 -104.892 -103.457 -60.155 1 140.85 ? CG ABU 1318 I 1 
HETATM 5 C C ABU . . . M 2 -103.567 -103.774 -60.74 1 151.79 ? C ABU 1318 I 1 
HETATM 6 O O ABU . . . M 2 -103.406 -103.848 -62 1 148.94 ? O ABU 1318 I 1 
HETATM 7 O OXT ABU . . . M 2 -102.581 -103.844 -59.961 1 138.4 ? OXT ABU 1318 I 1 
#
_model_server_stats.io_time_ms              53 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    54 
_model_server_stats.query_time_ms           290 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           7 
#