data_2YS6
#
_model_server_result.job_id            4ihtPHTuY3lRCXRL5GTWIA 
_model_server_result.datetime_utc      '2024-11-05 00:23:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2ys6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":431}' 
#
_entry.id    2YS6 
#
_exptl.entry_id    2YS6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              75.067 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCINE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2YS6 
_cell.length_a            50.786 
_cell.length_b            83.43 
_cell.length_c            96.536 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2YS6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C2 H5 N O2' 
_chem_comp.formula_weight    75.067 
_chem_comp.id                GLY 
_chem_comp.mon_nstd_flag     y 
_chem_comp.name              GLYCINE 
_chem_comp.type              'peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA GLY sing 159 n n 
N H GLY sing 160 n n 
N H2 GLY sing 161 n n 
CA C GLY sing 162 n n 
CA HA2 GLY sing 163 n n 
CA HA3 GLY sing 164 n n 
C O GLY doub 165 n n 
C OXT GLY sing 166 n n 
OXT HXT GLY sing 167 n n 
#
_atom_sites.entry_id                     2YS6 
_atom_sites.fract_transf_matrix[1][1]    0.01969 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011986 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010359 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GLY A 1 431 343 GLY GLY . 
C 3 AMP A 1 432 100 AMP AMP . 
D 4 HOH A 1 433 1 HOH HOH . 
D 4 HOH A 2 434 2 HOH HOH . 
D 4 HOH A 3 435 3 HOH HOH . 
D 4 HOH A 4 436 4 HOH HOH . 
D 4 HOH A 5 437 5 HOH HOH . 
D 4 HOH A 6 438 6 HOH HOH . 
D 4 HOH A 7 439 7 HOH HOH . 
D 4 HOH A 8 440 8 HOH HOH . 
D 4 HOH A 9 441 9 HOH HOH . 
D 4 HOH A 10 442 10 HOH HOH . 
D 4 HOH A 11 443 11 HOH HOH . 
D 4 HOH A 12 444 12 HOH HOH . 
D 4 HOH A 13 445 13 HOH HOH . 
D 4 HOH A 14 446 14 HOH HOH . 
D 4 HOH A 15 447 15 HOH HOH . 
D 4 HOH A 16 448 16 HOH HOH . 
D 4 HOH A 17 449 17 HOH HOH . 
D 4 HOH A 18 450 18 HOH HOH . 
D 4 HOH A 19 451 19 HOH HOH . 
D 4 HOH A 20 452 20 HOH HOH . 
D 4 HOH A 21 453 21 HOH HOH . 
D 4 HOH A 22 454 22 HOH HOH . 
D 4 HOH A 23 455 23 HOH HOH . 
D 4 HOH A 24 456 24 HOH HOH . 
D 4 HOH A 25 457 25 HOH HOH . 
D 4 HOH A 26 458 26 HOH HOH . 
D 4 HOH A 27 459 27 HOH HOH . 
D 4 HOH A 28 460 28 HOH HOH . 
D 4 HOH A 29 461 29 HOH HOH . 
D 4 HOH A 30 462 30 HOH HOH . 
D 4 HOH A 31 463 31 HOH HOH . 
D 4 HOH A 32 464 32 HOH HOH . 
D 4 HOH A 33 465 33 HOH HOH . 
D 4 HOH A 34 466 34 HOH HOH . 
D 4 HOH A 35 467 35 HOH HOH . 
D 4 HOH A 36 468 36 HOH HOH . 
D 4 HOH A 37 469 37 HOH HOH . 
D 4 HOH A 38 470 38 HOH HOH . 
D 4 HOH A 39 471 39 HOH HOH . 
D 4 HOH A 40 472 40 HOH HOH . 
D 4 HOH A 41 473 41 HOH HOH . 
D 4 HOH A 42 474 42 HOH HOH . 
D 4 HOH A 43 475 43 HOH HOH . 
D 4 HOH A 44 476 44 HOH HOH . 
D 4 HOH A 45 477 45 HOH HOH . 
D 4 HOH A 46 478 46 HOH HOH . 
D 4 HOH A 47 479 47 HOH HOH . 
D 4 HOH A 48 480 48 HOH HOH . 
D 4 HOH A 49 481 49 HOH HOH . 
D 4 HOH A 50 482 50 HOH HOH . 
D 4 HOH A 51 483 51 HOH HOH . 
D 4 HOH A 52 484 52 HOH HOH . 
D 4 HOH A 53 485 53 HOH HOH . 
D 4 HOH A 54 486 54 HOH HOH . 
D 4 HOH A 55 487 55 HOH HOH . 
D 4 HOH A 56 488 56 HOH HOH . 
D 4 HOH A 57 489 57 HOH HOH . 
D 4 HOH A 58 490 58 HOH HOH . 
D 4 HOH A 59 491 59 HOH HOH . 
D 4 HOH A 60 492 60 HOH HOH . 
D 4 HOH A 61 493 61 HOH HOH . 
D 4 HOH A 62 494 62 HOH HOH . 
D 4 HOH A 63 495 63 HOH HOH . 
D 4 HOH A 64 496 64 HOH HOH . 
D 4 HOH A 65 497 65 HOH HOH . 
D 4 HOH A 66 498 66 HOH HOH . 
D 4 HOH A 67 499 67 HOH HOH . 
D 4 HOH A 68 500 68 HOH HOH . 
D 4 HOH A 69 501 69 HOH HOH . 
D 4 HOH A 70 502 70 HOH HOH . 
D 4 HOH A 71 503 71 HOH HOH . 
D 4 HOH A 72 504 72 HOH HOH . 
D 4 HOH A 73 505 73 HOH HOH . 
D 4 HOH A 74 506 74 HOH HOH . 
D 4 HOH A 75 507 75 HOH HOH . 
D 4 HOH A 76 508 76 HOH HOH . 
D 4 HOH A 77 509 77 HOH HOH . 
D 4 HOH A 78 510 78 HOH HOH . 
D 4 HOH A 79 511 79 HOH HOH . 
D 4 HOH A 80 512 80 HOH HOH . 
D 4 HOH A 81 513 81 HOH HOH . 
D 4 HOH A 82 514 82 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N GLY . . . B 2 4.446 -15.674 28.159 1 33.55 ? N GLY 431 A 1 
HETATM 2 C CA GLY . . . B 2 5.001 -16.966 28.654 1 34.28 ? CA GLY 431 A 1 
HETATM 3 C C GLY . . . B 2 5.095 -18.015 27.56 1 35.72 ? C GLY 431 A 1 
HETATM 4 O O GLY . . . B 2 5.374 -19.19 27.881 1 35.73 ? O GLY 431 A 1 
HETATM 5 O OXT GLY . . . B 2 4.889 -17.66 26.378 1 28.09 ? OXT GLY 431 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           316 
_model_server_stats.encode_time_ms          14 
_model_server_stats.element_count           5 
#