data_2YWP
#
_model_server_result.job_id            qfiC52WebwsXhi-UUp6AkQ 
_model_server_result.datetime_utc      '2025-01-02 21:51:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2ywp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":1}' 
#
_entry.id    2YWP 
#
_exptl.entry_id    2YWP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              333.73 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1-(5-CHLORO-2,4-DIMETHOXYPHENYL)-3-(5-CYANOPYRAZIN-2-YL)UREA 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          94.07 
_cell.angle_gamma         90 
_cell.entry_id            2YWP 
_cell.length_a            44.863 
_cell.length_b            65.513 
_cell.length_c            57.84 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2YWP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C14 H12 Cl N5 O3' 
_chem_comp.formula_weight    333.73 
_chem_comp.id                A42 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1-(5-CHLORO-2,4-DIMETHOXYPHENYL)-3-(5-CYANOPYRAZIN-2-YL)UREA 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C6 A42 doub 1 n y 
C1 N2 A42 sing 2 n y 
C1 C7 A42 sing 3 n n 
N2 C3 A42 doub 4 n y 
C3 C4 A42 sing 5 n y 
C3 H3 A42 sing 6 n n 
C4 N9 A42 sing 7 n n 
C4 N5 A42 doub 8 n y 
N5 C6 A42 sing 9 n y 
C6 H6 A42 sing 10 n n 
C7 N8 A42 trip 11 n n 
N9 C10 A42 sing 12 n n 
N9 HN9 A42 sing 13 n n 
C10 O11 A42 doub 14 n n 
C10 N12 A42 sing 15 n n 
N12 C13 A42 sing 16 n n 
N12 HN12 A42 sing 17 n n 
C13 C14 A42 sing 18 n y 
C13 C18 A42 doub 19 n y 
C14 C15 A42 doub 20 n y 
C14 H14 A42 sing 21 n n 
C15 CL1 A42 sing 22 n n 
C15 C16 A42 sing 23 n y 
C16 O21 A42 sing 24 n n 
C16 C17 A42 doub 25 n y 
C17 C18 A42 sing 26 n y 
C17 H17 A42 sing 27 n n 
C18 O19 A42 sing 28 n n 
O19 C20 A42 sing 29 n n 
C20 H201 A42 sing 30 n n 
C20 H202 A42 sing 31 n n 
C20 H203 A42 sing 32 n n 
O21 C22 A42 sing 33 n n 
C22 H221 A42 sing 34 n n 
C22 H222 A42 sing 35 n n 
C22 H223 A42 sing 36 n n 
#
_atom_sites.entry_id                     2YWP 
_atom_sites.fract_transf_matrix[1][1]    0.02229 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001586 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015264 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017333 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          B 
_pdbx_nonpoly_scheme.entity_id        2 
_pdbx_nonpoly_scheme.mon_id           A42 
_pdbx_nonpoly_scheme.pdb_strand_id    A 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      1 
_pdbx_nonpoly_scheme.auth_seq_num     1 
_pdbx_nonpoly_scheme.pdb_mon_id       A42 
_pdbx_nonpoly_scheme.auth_mon_id      A42 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 A42 . . . B 2 -8.218 9.121 -16.584 1 47.8 ? C1 A42 1 A 1 
HETATM 2 N N2 A42 . . . B 2 -8.496 10.445 -16.874 1 47.94 ? N2 A42 1 A 1 
HETATM 3 C C3 A42 . . . B 2 -7.589 11.17 -17.627 1 48.07 ? C3 A42 1 A 1 
HETATM 4 C C4 A42 . . . B 2 -6.368 10.579 -18.114 1 48.32 ? C4 A42 1 A 1 
HETATM 5 N N5 A42 . . . B 2 -6.085 9.232 -17.819 1 48.04 ? N5 A42 1 A 1 
HETATM 6 C C6 A42 . . . B 2 -7.004 8.503 -17.058 1 47.89 ? C6 A42 1 A 1 
HETATM 7 C C7 A42 . . . B 2 -9.141 8.395 -15.824 1 47.54 ? C7 A42 1 A 1 
HETATM 8 N N8 A42 . . . B 2 -9.95 7.805 -15.233 1 46.91 ? N8 A42 1 A 1 
HETATM 9 N N9 A42 . . . B 2 -5.461 11.317 -18.864 1 48.63 ? N9 A42 1 A 1 
HETATM 10 C C10 A42 . . . B 2 -4.29 10.998 -19.503 1 49.16 ? C10 A42 1 A 1 
HETATM 11 O O11 A42 . . . B 2 -3.893 11.746 -20.394 1 48.6 ? O11 A42 1 A 1 
HETATM 12 N N12 A42 . . . B 2 -3.665 9.793 -19.174 1 49.51 ? N12 A42 1 A 1 
HETATM 13 C C13 A42 . . . B 2 -2.307 9.407 -19.247 1 49.99 ? C13 A42 1 A 1 
HETATM 14 C C14 A42 . . . B 2 -1.325 10.114 -20.085 1 49.96 ? C14 A42 1 A 1 
HETATM 15 C C15 A42 . . . B 2 0.046 9.702 -20.145 1 50.05 ? C15 A42 1 A 1 
HETATM 16 C C16 A42 . . . B 2 0.526 8.564 -19.386 1 50.48 ? C16 A42 1 A 1 
HETATM 17 C C17 A42 . . . B 2 -0.438 7.867 -18.558 1 50.62 ? C17 A42 1 A 1 
HETATM 18 C C18 A42 . . . B 2 -1.837 8.259 -18.475 1 50.38 ? C18 A42 1 A 1 
HETATM 19 O O19 A42 . . . B 2 -2.568 7.417 -17.602 1 50.63 ? O19 A42 1 A 1 
HETATM 20 C C20 A42 . . . B 2 -3.529 6.478 -18.08 1 50.68 ? C20 A42 1 A 1 
HETATM 21 O O21 A42 . . . B 2 1.895 8.197 -19.479 1 50.93 ? O21 A42 1 A 1 
HETATM 22 C C22 A42 . . . B 2 2.222 7.015 -20.213 1 50.96 ? C22 A42 1 A 1 
HETATM 23 CL CL1 A42 . . . B 2 1.121 10.62 -21.17 1 49.65 ? CL1 A42 1 A 1 
#
_model_server_stats.io_time_ms              5 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           235 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           23 
#