data_2Z04 # _model_server_result.job_id 0NEwH1vExDGUMt6WpkAGSQ _model_server_result.datetime_utc '2024-12-21 16:08:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2z04 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":357}' # _entry.id 2Z04 # _exptl.entry_id 2Z04 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 93.93 _cell.angle_beta 101.54 _cell.angle_gamma 114.23 _cell.entry_id 2Z04 _cell.length_a 51.291 _cell.length_b 55.053 _cell.length_c 74.541 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2Z04 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 39 A CYS 39 1_555 A SG CYS 45 A CYS 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.891 ? covale ? covale1 A C TRP 14 A TRP 14 1_555 A N MSE 15 A MSE 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale2 A C MSE 15 A MSE 15 1_555 A N THR 16 A THR 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale3 A C LEU 224 A LEU 224 1_555 A N MSE 225 A MSE 225 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale4 A C MSE 225 A MSE 225 1_555 A N GLU 226 A GLU 226 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale5 A C GLU 280 A GLU 280 1_555 A N MSE 281 A MSE 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale6 A C MSE 281 A MSE 281 1_555 A N PRO 282 A PRO 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale7 A C GLY 293 A GLY 293 1_555 A N MSE 294 A MSE 294 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale8 A C MSE 294 A MSE 294 1_555 A N VAL 295 A VAL 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale9 B C TRP 14 B TRP 14 1_555 B N MSE 15 B MSE 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale10 B C MSE 15 B MSE 15 1_555 B N THR 16 B THR 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale11 B C LEU 224 B LEU 224 1_555 B N MSE 225 B MSE 225 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale12 B C MSE 225 B MSE 225 1_555 B N GLU 226 B GLU 226 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale13 B C GLU 280 B GLU 280 1_555 B N MSE 281 B MSE 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale14 B C MSE 281 B MSE 281 1_555 B N PRO 282 B PRO 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale15 B C GLY 293 B GLY 293 1_555 B N MSE 294 B MSE 294 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale16 B C MSE 294 B MSE 294 1_555 B N VAL 295 B VAL 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 2Z04 _atom_sites.fract_transf_matrix[1][1] 0.019497 _atom_sites.fract_transf_matrix[1][2] 0.008774 _atom_sites.fract_transf_matrix[1][3] 0.005539 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019919 _atom_sites.fract_transf_matrix[2][3] 0.003407 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013891 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 1 1 SO4 SO4 . D 2 SO4 B 1 357 2 SO4 SO4 . E 3 HOH A 1 355 1 HOH TIP . E 3 HOH A 2 356 3 HOH TIP . E 3 HOH A 3 357 4 HOH TIP . E 3 HOH A 4 358 10 HOH TIP . E 3 HOH A 5 359 14 HOH TIP . E 3 HOH A 6 360 18 HOH TIP . E 3 HOH A 7 361 19 HOH TIP . E 3 HOH A 8 362 20 HOH TIP . E 3 HOH A 9 363 23 HOH TIP . E 3 HOH A 10 364 26 HOH TIP . E 3 HOH A 11 365 27 HOH TIP . E 3 HOH A 12 366 29 HOH TIP . E 3 HOH A 13 367 33 HOH TIP . E 3 HOH A 14 368 35 HOH TIP . E 3 HOH A 15 369 36 HOH TIP . E 3 HOH A 16 370 37 HOH TIP . E 3 HOH A 17 371 38 HOH TIP . F 3 HOH B 1 358 2 HOH TIP . F 3 HOH B 2 359 5 HOH TIP . F 3 HOH B 3 360 6 HOH TIP . F 3 HOH B 4 361 7 HOH TIP . F 3 HOH B 5 362 8 HOH TIP . F 3 HOH B 6 363 9 HOH TIP . F 3 HOH B 7 364 11 HOH TIP . F 3 HOH B 8 365 12 HOH TIP . F 3 HOH B 9 366 13 HOH TIP . F 3 HOH B 10 367 15 HOH TIP . F 3 HOH B 11 368 16 HOH TIP . F 3 HOH B 12 369 17 HOH TIP . F 3 HOH B 13 370 21 HOH TIP . F 3 HOH B 14 371 22 HOH TIP . F 3 HOH B 15 372 24 HOH TIP . F 3 HOH B 16 373 25 HOH TIP . F 3 HOH B 17 374 28 HOH TIP . F 3 HOH B 18 375 30 HOH TIP . F 3 HOH B 19 376 31 HOH TIP . F 3 HOH B 20 377 32 HOH TIP . F 3 HOH B 21 378 34 HOH TIP . F 3 HOH B 22 379 39 HOH TIP . F 3 HOH B 23 380 40 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 2 6.835 -19.715 12 1 71.89 ? S SO4 357 B 1 HETATM 2 O O1 SO4 . . . D 2 6.781 -21.144 12.393 1 73.77 ? O1 SO4 357 B 1 HETATM 3 O O2 SO4 . . . D 2 5.843 -19.45 10.935 1 73.32 ? O2 SO4 357 B 1 HETATM 4 O O3 SO4 . . . D 2 6.507 -18.885 13.176 1 72.59 ? O3 SO4 357 B 1 HETATM 5 O O4 SO4 . . . D 2 8.189 -19.381 11.51 1 71.13 ? O4 SO4 357 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 611 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #