data_2Z0A # _model_server_result.job_id Mj11p-JrOm7FQrrdFTyVRw _model_server_result.datetime_utc '2024-11-04 22:43:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2z0a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":75}' # _entry.id 2Z0A # _exptl.entry_id 2Z0A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 118.088 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SUCCINIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.57 _cell.angle_gamma 90 _cell.entry_id 2Z0A _cell.length_a 37.723 _cell.length_b 54.378 _cell.length_c 66.347 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2Z0A _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,K,L 1 1 C,D,I,J,M,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 H N N # _chem_comp.formula 'C4 H6 O4' _chem_comp.formula_weight 118.088 _chem_comp.id SIN _chem_comp.mon_nstd_flag . _chem_comp.name 'SUCCINIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 SIN doub 290 n n C1 O2 SIN sing 291 n n C1 C2 SIN sing 292 n n O2 HO2 SIN sing 293 n n C2 C3 SIN sing 294 n n C2 H21 SIN sing 295 n n C2 H22 SIN sing 296 n n C3 C4 SIN sing 297 n n C3 H31 SIN sing 298 n n C3 H32 SIN sing 299 n n C4 O3 SIN doub 300 n n C4 O4 SIN sing 301 n n O4 HO4 SIN sing 302 n n # _atom_sites.entry_id 2Z0A _atom_sites.fract_transf_matrix[1][1] 0.026509 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004949 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01839 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015333 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 GLY A 1 73 3 GLY GLY . F 2 GLY A 1 74 4 GLY GLY . G 3 SIN A 1 75 1 SIN SIN . H 3 SIN B 1 73 2 SIN SIN . I 2 GLY C 1 73 2 GLY GLY . J 2 GLY D 1 73 1 GLY GLY . K 4 HOH A 1 76 4 HOH HOH . K 4 HOH A 2 77 5 HOH HOH . K 4 HOH A 3 78 6 HOH HOH . K 4 HOH A 4 79 7 HOH HOH . K 4 HOH A 5 80 8 HOH HOH . K 4 HOH A 6 81 12 HOH HOH . K 4 HOH A 7 82 15 HOH HOH . K 4 HOH A 8 83 18 HOH HOH . K 4 HOH A 9 84 25 HOH HOH . K 4 HOH A 10 85 27 HOH HOH . K 4 HOH A 11 86 29 HOH HOH . K 4 HOH A 12 87 32 HOH HOH . K 4 HOH A 13 88 38 HOH HOH . K 4 HOH A 14 89 43 HOH HOH . K 4 HOH A 15 90 56 HOH HOH . K 4 HOH A 16 91 57 HOH HOH . K 4 HOH A 17 92 60 HOH HOH . K 4 HOH A 18 93 70 HOH HOH . K 4 HOH A 19 94 76 HOH HOH . K 4 HOH A 20 95 78 HOH HOH . K 4 HOH A 21 96 79 HOH HOH . K 4 HOH A 22 97 82 HOH HOH . K 4 HOH A 23 98 93 HOH HOH . K 4 HOH A 24 99 98 HOH HOH . K 4 HOH A 25 100 100 HOH HOH . K 4 HOH A 26 101 101 HOH HOH . K 4 HOH A 27 102 108 HOH HOH . K 4 HOH A 28 103 111 HOH HOH . K 4 HOH A 29 104 114 HOH HOH . K 4 HOH A 30 105 119 HOH HOH . K 4 HOH A 31 106 120 HOH HOH . K 4 HOH A 32 107 122 HOH HOH . K 4 HOH A 33 108 124 HOH HOH . K 4 HOH A 34 109 125 HOH HOH . K 4 HOH A 35 110 126 HOH HOH . K 4 HOH A 36 111 131 HOH HOH . K 4 HOH A 37 112 132 HOH HOH . K 4 HOH A 38 113 135 HOH HOH . K 4 HOH A 39 114 136 HOH HOH . K 4 HOH A 40 115 137 HOH HOH . K 4 HOH A 41 116 139 HOH HOH . K 4 HOH A 42 117 157 HOH HOH . K 4 HOH A 43 118 165 HOH HOH . K 4 HOH A 44 119 166 HOH HOH . K 4 HOH A 45 120 167 HOH HOH . K 4 HOH A 46 121 168 HOH HOH . K 4 HOH A 47 122 169 HOH HOH . K 4 HOH A 48 123 178 HOH HOH . K 4 HOH A 49 124 189 HOH HOH . K 4 HOH A 50 125 193 HOH HOH . K 4 HOH A 51 126 201 HOH HOH . K 4 HOH A 52 127 203 HOH HOH . K 4 HOH A 53 128 204 HOH HOH . K 4 HOH A 54 129 207 HOH HOH . K 4 HOH A 55 130 225 HOH HOH . K 4 HOH A 56 131 226 HOH HOH . K 4 HOH A 57 132 227 HOH HOH . K 4 HOH A 58 133 231 HOH HOH . K 4 HOH A 59 134 237 HOH HOH . K 4 HOH A 60 135 242 HOH HOH . K 4 HOH A 61 136 250 HOH HOH . K 4 HOH A 62 137 260 HOH HOH . K 4 HOH A 63 138 261 HOH HOH . K 4 HOH A 64 139 264 HOH HOH . K 4 HOH A 65 140 265 HOH HOH . K 4 HOH A 66 141 270 HOH HOH . K 4 HOH A 67 142 277 HOH HOH . K 4 HOH A 68 143 279 HOH HOH . K 4 HOH A 69 144 280 HOH HOH . K 4 HOH A 70 145 281 HOH HOH . K 4 HOH A 71 146 163 HOH HOH . K 4 HOH A 72 147 206 HOH HOH . L 4 HOH B 1 113 134 HOH HOH . L 4 HOH B 2 114 205 HOH HOH . L 4 HOH B 3 115 3 HOH HOH . L 4 HOH B 4 116 9 HOH HOH . L 4 HOH B 5 117 14 HOH HOH . L 4 HOH B 6 118 16 HOH HOH . L 4 HOH B 7 119 17 HOH HOH . L 4 HOH B 8 120 22 HOH HOH . L 4 HOH B 9 121 23 HOH HOH . L 4 HOH B 10 122 28 HOH HOH . L 4 HOH B 11 123 30 HOH HOH . L 4 HOH B 12 124 31 HOH HOH . L 4 HOH B 13 125 39 HOH HOH . L 4 HOH B 14 126 41 HOH HOH . L 4 HOH B 15 127 44 HOH HOH . L 4 HOH B 16 128 49 HOH HOH . L 4 HOH B 17 129 51 HOH HOH . L 4 HOH B 18 130 58 HOH HOH . L 4 HOH B 19 131 61 HOH HOH . L 4 HOH B 20 132 63 HOH HOH . L 4 HOH B 21 133 66 HOH HOH . L 4 HOH B 22 134 69 HOH HOH . L 4 HOH B 23 135 73 HOH HOH . L 4 HOH B 24 136 77 HOH HOH . L 4 HOH B 25 137 80 HOH HOH . L 4 HOH B 26 138 84 HOH HOH . L 4 HOH B 27 139 85 HOH HOH . L 4 HOH B 28 140 89 HOH HOH . L 4 HOH B 29 141 90 HOH HOH . L 4 HOH B 30 142 97 HOH HOH . L 4 HOH B 31 143 105 HOH HOH . L 4 HOH B 32 144 106 HOH HOH . L 4 HOH B 33 145 109 HOH HOH . L 4 HOH B 34 146 112 HOH HOH . L 4 HOH B 35 147 113 HOH HOH . L 4 HOH B 36 148 117 HOH HOH . L 4 HOH B 37 149 133 HOH HOH . L 4 HOH B 38 150 138 HOH HOH . L 4 HOH B 39 151 141 HOH HOH . L 4 HOH B 40 152 142 HOH HOH . L 4 HOH B 41 153 155 HOH HOH . L 4 HOH B 42 154 161 HOH HOH . L 4 HOH B 43 155 170 HOH HOH . L 4 HOH B 44 156 171 HOH HOH . L 4 HOH B 45 157 172 HOH HOH . L 4 HOH B 46 158 181 HOH HOH . L 4 HOH B 47 159 182 HOH HOH . L 4 HOH B 48 160 183 HOH HOH . L 4 HOH B 49 161 190 HOH HOH . L 4 HOH B 50 162 191 HOH HOH . L 4 HOH B 51 163 192 HOH HOH . L 4 HOH B 52 164 222 HOH HOH . L 4 HOH B 53 165 223 HOH HOH . L 4 HOH B 54 166 228 HOH HOH . L 4 HOH B 55 167 229 HOH HOH . L 4 HOH B 56 168 232 HOH HOH . L 4 HOH B 57 169 236 HOH HOH . L 4 HOH B 58 170 238 HOH HOH . L 4 HOH B 59 171 243 HOH HOH . L 4 HOH B 60 172 254 HOH HOH . L 4 HOH B 61 173 255 HOH HOH . L 4 HOH B 62 174 256 HOH HOH . L 4 HOH B 63 175 262 HOH HOH . L 4 HOH B 64 176 267 HOH HOH . L 4 HOH B 65 177 268 HOH HOH . L 4 HOH B 66 178 269 HOH HOH . L 4 HOH B 67 179 271 HOH HOH . L 4 HOH B 68 180 272 HOH HOH . L 4 HOH B 69 181 283 HOH HOH . L 4 HOH B 70 182 40 HOH HOH . M 4 HOH C 1 74 2 HOH HOH . M 4 HOH C 2 75 10 HOH HOH . M 4 HOH C 3 76 11 HOH HOH . M 4 HOH C 4 77 21 HOH HOH . M 4 HOH C 5 78 33 HOH HOH . M 4 HOH C 6 79 34 HOH HOH . M 4 HOH C 7 80 35 HOH HOH . M 4 HOH C 8 81 36 HOH HOH . M 4 HOH C 9 82 37 HOH HOH . M 4 HOH C 10 83 50 HOH HOH . M 4 HOH C 11 84 54 HOH HOH . M 4 HOH C 12 85 55 HOH HOH . M 4 HOH C 13 86 59 HOH HOH . M 4 HOH C 14 87 65 HOH HOH . M 4 HOH C 15 88 67 HOH HOH . M 4 HOH C 16 89 71 HOH HOH . M 4 HOH C 17 90 74 HOH HOH . M 4 HOH C 18 91 86 HOH HOH . M 4 HOH C 19 92 88 HOH HOH . M 4 HOH C 20 93 91 HOH HOH . M 4 HOH C 21 94 92 HOH HOH . M 4 HOH C 22 95 95 HOH HOH . M 4 HOH C 23 96 96 HOH HOH . M 4 HOH C 24 97 99 HOH HOH . M 4 HOH C 25 98 103 HOH HOH . M 4 HOH C 26 99 115 HOH HOH . M 4 HOH C 27 100 116 HOH HOH . M 4 HOH C 28 101 128 HOH HOH . M 4 HOH C 29 102 143 HOH HOH . M 4 HOH C 30 103 144 HOH HOH . M 4 HOH C 31 104 145 HOH HOH . M 4 HOH C 32 105 146 HOH HOH . M 4 HOH C 33 106 147 HOH HOH . M 4 HOH C 34 107 148 HOH HOH . M 4 HOH C 35 108 152 HOH HOH . M 4 HOH C 36 109 154 HOH HOH . M 4 HOH C 37 110 173 HOH HOH . M 4 HOH C 38 111 174 HOH HOH . M 4 HOH C 39 112 208 HOH HOH . M 4 HOH C 40 113 209 HOH HOH . M 4 HOH C 41 114 211 HOH HOH . M 4 HOH C 42 115 212 HOH HOH . M 4 HOH C 43 116 213 HOH HOH . M 4 HOH C 44 117 214 HOH HOH . M 4 HOH C 45 118 215 HOH HOH . M 4 HOH C 46 119 216 HOH HOH . M 4 HOH C 47 120 217 HOH HOH . M 4 HOH C 48 121 218 HOH HOH . M 4 HOH C 49 122 219 HOH HOH . M 4 HOH C 50 123 220 HOH HOH . M 4 HOH C 51 124 221 HOH HOH . M 4 HOH C 52 125 224 HOH HOH . M 4 HOH C 53 126 239 HOH HOH . M 4 HOH C 54 127 240 HOH HOH . M 4 HOH C 55 128 246 HOH HOH . M 4 HOH C 56 129 251 HOH HOH . M 4 HOH C 57 130 252 HOH HOH . M 4 HOH C 58 131 259 HOH HOH . M 4 HOH C 59 132 263 HOH HOH . M 4 HOH C 60 133 266 HOH HOH . M 4 HOH C 61 134 286 HOH HOH . M 4 HOH C 62 135 179 HOH HOH . M 4 HOH C 63 136 273 HOH HOH . M 4 HOH C 64 137 282 HOH HOH . N 4 HOH D 1 118 140 HOH HOH . N 4 HOH D 2 119 210 HOH HOH . N 4 HOH D 3 120 1 HOH HOH . N 4 HOH D 4 121 13 HOH HOH . N 4 HOH D 5 122 19 HOH HOH . N 4 HOH D 6 123 20 HOH HOH . N 4 HOH D 7 124 24 HOH HOH . N 4 HOH D 8 125 26 HOH HOH . N 4 HOH D 9 126 42 HOH HOH . N 4 HOH D 10 127 45 HOH HOH . N 4 HOH D 11 128 46 HOH HOH . N 4 HOH D 12 129 47 HOH HOH . N 4 HOH D 13 130 48 HOH HOH . N 4 HOH D 14 131 52 HOH HOH . N 4 HOH D 15 132 53 HOH HOH . N 4 HOH D 16 133 62 HOH HOH . N 4 HOH D 17 134 64 HOH HOH . N 4 HOH D 18 135 68 HOH HOH . N 4 HOH D 19 136 72 HOH HOH . N 4 HOH D 20 137 75 HOH HOH . N 4 HOH D 21 138 81 HOH HOH . N 4 HOH D 22 139 83 HOH HOH . N 4 HOH D 23 140 87 HOH HOH . N 4 HOH D 24 141 94 HOH HOH . N 4 HOH D 25 142 102 HOH HOH . N 4 HOH D 26 143 104 HOH HOH . N 4 HOH D 27 144 107 HOH HOH . N 4 HOH D 28 145 110 HOH HOH . N 4 HOH D 29 146 118 HOH HOH . N 4 HOH D 30 147 121 HOH HOH . N 4 HOH D 31 148 123 HOH HOH . N 4 HOH D 32 149 127 HOH HOH . N 4 HOH D 33 150 129 HOH HOH . N 4 HOH D 34 151 130 HOH HOH . N 4 HOH D 35 152 149 HOH HOH . N 4 HOH D 36 153 150 HOH HOH . N 4 HOH D 37 154 151 HOH HOH . N 4 HOH D 38 155 153 HOH HOH . N 4 HOH D 39 156 156 HOH HOH . N 4 HOH D 40 157 158 HOH HOH . N 4 HOH D 41 158 159 HOH HOH . N 4 HOH D 42 159 160 HOH HOH . N 4 HOH D 43 160 162 HOH HOH . N 4 HOH D 44 161 164 HOH HOH . N 4 HOH D 45 162 175 HOH HOH . N 4 HOH D 46 163 176 HOH HOH . N 4 HOH D 47 164 177 HOH HOH . N 4 HOH D 48 165 180 HOH HOH . N 4 HOH D 49 166 184 HOH HOH . N 4 HOH D 50 167 185 HOH HOH . N 4 HOH D 51 168 186 HOH HOH . N 4 HOH D 52 169 187 HOH HOH . N 4 HOH D 53 170 188 HOH HOH . N 4 HOH D 54 171 194 HOH HOH . N 4 HOH D 55 172 195 HOH HOH . N 4 HOH D 56 173 196 HOH HOH . N 4 HOH D 57 174 197 HOH HOH . N 4 HOH D 58 175 198 HOH HOH . N 4 HOH D 59 176 199 HOH HOH . N 4 HOH D 60 177 200 HOH HOH . N 4 HOH D 61 178 202 HOH HOH . N 4 HOH D 62 179 230 HOH HOH . N 4 HOH D 63 180 233 HOH HOH . N 4 HOH D 64 181 234 HOH HOH . N 4 HOH D 65 182 235 HOH HOH . N 4 HOH D 66 183 241 HOH HOH . N 4 HOH D 67 184 244 HOH HOH . N 4 HOH D 68 185 245 HOH HOH . N 4 HOH D 69 186 247 HOH HOH . N 4 HOH D 70 187 248 HOH HOH . N 4 HOH D 71 188 249 HOH HOH . N 4 HOH D 72 189 253 HOH HOH . N 4 HOH D 73 190 257 HOH HOH . N 4 HOH D 74 191 258 HOH HOH . N 4 HOH D 75 192 274 HOH HOH . N 4 HOH D 76 193 275 HOH HOH . N 4 HOH D 77 194 276 HOH HOH . N 4 HOH D 78 195 278 HOH HOH . N 4 HOH D 79 196 284 HOH HOH . N 4 HOH D 80 197 285 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 SIN . . . G 3 5.471 6.883 27.628 1 38.79 ? C1 SIN 75 A 1 HETATM 2 O O1 SIN . . . G 3 4.724 7.595 26.908 1 37.05 ? O1 SIN 75 A 1 HETATM 3 O O2 SIN . . . G 3 6.511 7.396 28.104 1 39.25 ? O2 SIN 75 A 1 HETATM 4 C C2 SIN . . . G 3 5.133 5.43 27.899 1 38.65 ? C2 SIN 75 A 1 HETATM 5 C C3 SIN . . . G 3 5.569 4.987 29.296 1 39.6 ? C3 SIN 75 A 1 HETATM 6 C C4 SIN . . . G 3 4.819 3.748 29.745 1 40.27 ? C4 SIN 75 A 1 HETATM 7 O O3 SIN . . . G 3 5.372 2.63 29.854 1 38.89 ? O3 SIN 75 A 1 HETATM 8 O O4 SIN . . . G 3 3.617 3.823 30.049 1 41.45 ? O4 SIN 75 A 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #