data_2Z1Y # _model_server_result.job_id 1KGnaHtzio3SQ8zjpPtU2A _model_server_result.datetime_utc '2024-12-01 18:36:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2z1y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":401}' # _entry.id 2Z1Y # _exptl.entry_id 2Z1Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 131.173 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description LEUCINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 116.34 _cell.angle_gamma 90 _cell.entry_id 2Z1Y _cell.length_a 137.107 _cell.length_b 62.229 _cell.length_c 107.439 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2Z1Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C N LEU . A LEU 400 1_555 D C4A PLP . A PLP 1400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.472 ? covale ? covale2 E N LEU . B LEU 401 1_555 F C4A PLP . B PLP 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.472 ? # _chem_comp.formula 'C6 H13 N O2' _chem_comp.formula_weight 131.173 _chem_comp.id LEU _chem_comp.mon_nstd_flag y _chem_comp.name LEUCINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA LEU sing 158 n n N H LEU sing 159 n n N H2 LEU sing 160 n n CA C LEU sing 161 n n CA CB LEU sing 162 n n CA HA LEU sing 163 n n C O LEU doub 164 n n C OXT LEU sing 165 n n CB CG LEU sing 166 n n CB HB2 LEU sing 167 n n CB HB3 LEU sing 168 n n CG CD1 LEU sing 169 n n CG CD2 LEU sing 170 n n CG HG LEU sing 171 n n CD1 HD11 LEU sing 172 n n CD1 HD12 LEU sing 173 n n CD1 HD13 LEU sing 174 n n CD2 HD21 LEU sing 175 n n CD2 HD22 LEU sing 176 n n CD2 HD23 LEU sing 177 n n OXT HXT LEU sing 178 n n # _atom_sites.entry_id 2Z1Y _atom_sites.fract_transf_matrix[1][1] 0.007294 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003611 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01607 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010386 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 LEU A 1 400 400 LEU PPL . D 3 PLP A 1 1400 400 PLP PPL . E 2 LEU B 1 401 401 LEU PPL . F 3 PLP B 1 1401 401 PLP PPL . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N LEU . . . E 2 49.593 17.723 19.809 1 20.97 ? N LEU 401 B 1 HETATM 2 C CA LEU . . . E 2 48.726 18.784 19.267 1 19.45 ? CA LEU 401 B 1 HETATM 3 C C LEU . . . E 2 49.274 20.108 19.81 1 16.5 ? C LEU 401 B 1 HETATM 4 O O LEU . . . E 2 48.905 21.181 19.283 1 16.34 ? O LEU 401 B 1 HETATM 5 C CB LEU . . . E 2 47.287 18.586 19.755 1 17.26 ? CB LEU 401 B 1 HETATM 6 C CG LEU . . . E 2 46.401 19.792 19.434 1 16.94 ? CG LEU 401 B 1 HETATM 7 C CD1 LEU . . . E 2 45.051 19.672 20.145 1 18.03 ? CD1 LEU 401 B 1 HETATM 8 C CD2 LEU . . . E 2 46.171 19.933 17.927 1 18.43 ? CD2 LEU 401 B 1 HETATM 9 O OXT LEU . . . E 2 50.069 20.011 20.767 1 18.08 ? OXT LEU 401 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 9 #