data_2Z3M # _model_server_result.job_id 0ERpPqvB_FVoKPL1I7WMfQ _model_server_result.datetime_utc '2024-11-23 18:39:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2z3m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":502}' # _entry.id 2Z3M # _exptl.entry_id 2Z3M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.087 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'D(-)-TARTARIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2Z3M _cell.length_a 116.681 _cell.length_b 127.682 _cell.length_c 38.354 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2Z3M _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C O3' 3D1 . A 3D1 301 1_555 D C PHE . A PHE 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.315 ? covale ? covale2 F O3' 3D1 . B 3D1 401 1_555 G C PHE . B PHE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? # _chem_comp.formula 'C4 H6 O6' _chem_comp.formula_weight 150.087 _chem_comp.id TAR _chem_comp.mon_nstd_flag . _chem_comp.name 'D(-)-TARTARIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 TAR doub 323 n n O11 C1 TAR sing 324 n n O11 HO1 TAR sing 325 n n C1 C2 TAR sing 326 n n C2 O2 TAR sing 327 n n C2 C3 TAR sing 328 n n C2 H2 TAR sing 329 n n O2 HO2 TAR sing 330 n n C3 O3 TAR sing 331 n n C3 C4 TAR sing 332 n n C3 H3 TAR sing 333 n n O3 HO3 TAR sing 334 n n C4 O4 TAR doub 335 n n C4 O41 TAR sing 336 n n O41 HO4 TAR sing 337 n n # _atom_sites.entry_id 2Z3M _atom_sites.fract_transf_matrix[1][1] 0.00857 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007832 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026073 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 3D1 A 1 301 301 3D1 ADE . D 3 PHE A 1 302 302 PHE PHE . E 4 TAR A 1 501 501 TAR TAR . F 2 3D1 B 1 401 401 3D1 ADE . G 3 PHE B 1 402 402 PHE PHE . H 4 TAR B 1 502 502 TAR TAR . I 5 HOH A 1 502 1002 HOH HOH . I 5 HOH A 2 503 1003 HOH HOH . I 5 HOH A 3 504 1008 HOH HOH . I 5 HOH A 4 505 1010 HOH HOH . I 5 HOH A 5 506 1011 HOH HOH . I 5 HOH A 6 507 1015 HOH HOH . I 5 HOH A 7 508 1016 HOH HOH . I 5 HOH A 8 509 1021 HOH HOH . I 5 HOH A 9 510 1023 HOH HOH . I 5 HOH A 10 511 1024 HOH HOH . I 5 HOH A 11 512 1025 HOH HOH . I 5 HOH A 12 513 1026 HOH HOH . I 5 HOH A 13 514 1027 HOH HOH . I 5 HOH A 14 515 1029 HOH HOH . I 5 HOH A 15 516 1030 HOH HOH . I 5 HOH A 16 517 1031 HOH HOH . J 5 HOH B 1 503 1001 HOH HOH . J 5 HOH B 2 504 1004 HOH HOH . J 5 HOH B 3 505 1005 HOH HOH . J 5 HOH B 4 506 1006 HOH HOH . J 5 HOH B 5 507 1007 HOH HOH . J 5 HOH B 6 508 1009 HOH HOH . J 5 HOH B 7 509 1012 HOH HOH . J 5 HOH B 8 510 1013 HOH HOH . J 5 HOH B 9 511 1014 HOH HOH . J 5 HOH B 10 512 1017 HOH HOH . J 5 HOH B 11 513 1018 HOH HOH . J 5 HOH B 12 514 1019 HOH HOH . J 5 HOH B 13 515 1020 HOH HOH . J 5 HOH B 14 516 1022 HOH HOH . J 5 HOH B 15 517 1028 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 TAR . . . H 4 0.48 22.193 21.851 1 65.95 ? O1 TAR 502 B 1 HETATM 2 O O11 TAR . . . H 4 0.823 20.208 20.941 1 73.06 ? O11 TAR 502 B 1 HETATM 3 C C1 TAR . . . H 4 0.679 21.005 22.005 1 71.97 ? C1 TAR 502 B 1 HETATM 4 C C2 TAR . . . H 4 0.77 20.408 23.393 1 73.89 ? C2 TAR 502 B 1 HETATM 5 O O2 TAR . . . H 4 0.585 21.417 24.39 1 76.46 ? O2 TAR 502 B 1 HETATM 6 C C3 TAR . . . H 4 -0.272 19.287 23.58 1 75.92 ? C3 TAR 502 B 1 HETATM 7 O O3 TAR . . . H 4 -1.607 19.777 23.365 1 74.45 ? O3 TAR 502 B 1 HETATM 8 C C4 TAR . . . H 4 -0.145 18.716 24.977 1 77.71 ? C4 TAR 502 B 1 HETATM 9 O O4 TAR . . . H 4 -1.096 18.716 25.73 1 80.38 ? O4 TAR 502 B 1 HETATM 10 O O41 TAR . . . H 4 1.036 18.212 25.386 1 79.15 ? O41 TAR 502 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 10 #