data_2Z4I # _model_server_result.job_id RvvXUDjyWtUZScyyMzaXaA _model_server_result.datetime_utc '2025-03-05 01:18:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2z4i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":4771}' # _entry.id 2Z4I # _exptl.entry_id 2Z4I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.331 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEXAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2Z4I _cell.length_a 121.422 _cell.length_b 121.422 _cell.length_c 84.456 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2Z4I _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 31 A CYS 31 1_555 A SG CYS 34 A CYS 34 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf2 A SG CYS 145 A CYS 145 1_555 A SG CYS 211 A CYS 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf3 B SG CYS 31 B CYS 31 1_555 B SG CYS 34 B CYS 34 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf4 B SG CYS 145 B CYS 145 1_555 B SG CYS 211 B CYS 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? covale ? covale1 A C PRO 20 A PRO 20 1_555 A N MSE 21 A MSE 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A C MSE 21 A MSE 21 1_555 A N PRO 22 A PRO 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? covale ? covale3 A C VAL 50 A VAL 50 1_555 A N MSE 51 A MSE 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale4 A C MSE 51 A MSE 51 1_555 A N ASN 52 A ASN 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale5 A C GLU 98 A GLU 98 1_555 A N MSE 99 A MSE 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale6 A C MSE 99 A MSE 99 1_555 A N LEU 100 A LEU 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale7 A C PRO 123 A PRO 123 1_555 A N MSE 124 A MSE 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale8 A C MSE 124 A MSE 124 1_555 A N THR 125 A THR 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale9 A C PRO 126 A PRO 126 1_555 A N MSE 127 A MSE 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale10 A C MSE 127 A MSE 127 1_555 A N THR 128 A THR 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale11 A C GLY 131 A GLY 131 1_555 A N MSE 132 A MSE 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale12 A C MSE 132 A MSE 132 1_555 A N TYR 133 A TYR 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale13 A C TYR 135 A TYR 135 1_555 A N MSE 136 A MSE 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale14 A C MSE 136 A MSE 136 1_555 A N ALA 137 A ALA 137 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale15 A C PHE 151 A PHE 151 1_555 A N MSE 152 A MSE 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale16 A C MSE 152 A MSE 152 1_555 A N VAL 153 A VAL 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale17 B C MSE 21 B MSE 21 1_555 B N PRO 22 B PRO 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.351 ? covale ? covale18 B C VAL 50 B VAL 50 1_555 B N MSE 51 B MSE 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale19 B C MSE 51 B MSE 51 1_555 B N ASN 52 B ASN 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale20 B C GLU 98 B GLU 98 1_555 B N MSE 99 B MSE 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale21 B C MSE 99 B MSE 99 1_555 B N LEU 100 B LEU 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale22 B C PRO 123 B PRO 123 1_555 B N MSE 124 B MSE 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale23 B C MSE 124 B MSE 124 1_555 B N THR 125 B THR 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale24 B C PRO 126 B PRO 126 1_555 B N MSE 127 B MSE 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale25 B C MSE 127 B MSE 127 1_555 B N THR 128 B THR 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale26 B C GLY 131 B GLY 131 1_555 B N MSE 132 B MSE 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale27 B C MSE 132 B MSE 132 1_555 B N TYR 133 B TYR 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale28 B C TYR 135 B TYR 135 1_555 B N MSE 136 B MSE 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale29 B C MSE 136 B MSE 136 1_555 B N ALA 137 B ALA 137 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale30 B C PHE 151 B PHE 151 1_555 B N MSE 152 B MSE 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale31 B C MSE 152 B MSE 152 1_555 B N VAL 153 B VAL 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? # _chem_comp.formula 'C12 H26 O7' _chem_comp.formula_weight 282.331 _chem_comp.id P6G _chem_comp.mon_nstd_flag . _chem_comp.name 'HEXAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'POLYETHYLENE GLYCOL PEG400' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 P6G sing 237 n n O1 H1 P6G sing 238 n n C2 C3 P6G sing 239 n n C2 H21 P6G sing 240 n n C2 H22 P6G sing 241 n n C3 O4 P6G sing 242 n n C3 H31 P6G sing 243 n n C3 H32 P6G sing 244 n n O4 C5 P6G sing 245 n n C5 C6 P6G sing 246 n n C5 H51 P6G sing 247 n n C5 H52 P6G sing 248 n n C6 O7 P6G sing 249 n n C6 H61 P6G sing 250 n n C6 H62 P6G sing 251 n n O7 C8 P6G sing 252 n n C8 C9 P6G sing 253 n n C8 H81 P6G sing 254 n n C8 H82 P6G sing 255 n n C9 O10 P6G sing 256 n n C9 H91 P6G sing 257 n n C9 H92 P6G sing 258 n n O10 C11 P6G sing 259 n n C11 C12 P6G sing 260 n n C11 H111 P6G sing 261 n n C11 H112 P6G sing 262 n n C12 O13 P6G sing 263 n n C12 H121 P6G sing 264 n n C12 H122 P6G sing 265 n n O13 C14 P6G sing 266 n n C14 C15 P6G sing 267 n n C14 H141 P6G sing 268 n n C14 H142 P6G sing 269 n n C15 O16 P6G sing 270 n n C15 H151 P6G sing 271 n n C15 H152 P6G sing 272 n n O16 C17 P6G sing 273 n n C17 C18 P6G sing 274 n n C17 H171 P6G sing 275 n n C17 H172 P6G sing 276 n n C18 O19 P6G sing 277 n n C18 H181 P6G sing 278 n n C18 H182 P6G sing 279 n n O19 H19 P6G sing 280 n n # _atom_sites.entry_id 2Z4I _atom_sites.fract_transf_matrix[1][1] 0.008236 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008236 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01184 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 P6G A 1 4771 4771 P6G P6G . D 3 SO4 B 1 4770 4770 SO4 SO4 . E 4 HOH A 1 4772 1 HOH HOH . E 4 HOH A 2 4773 2 HOH HOH . E 4 HOH A 3 4774 4 HOH HOH . E 4 HOH A 4 4775 5 HOH HOH . E 4 HOH A 5 4776 6 HOH HOH . E 4 HOH A 6 4777 9 HOH HOH . E 4 HOH A 7 4778 10 HOH HOH . E 4 HOH A 8 4779 11 HOH HOH . E 4 HOH A 9 4780 12 HOH HOH . E 4 HOH A 10 4781 13 HOH HOH . E 4 HOH A 11 4782 15 HOH HOH . E 4 HOH A 12 4783 17 HOH HOH . E 4 HOH A 13 4784 18 HOH HOH . E 4 HOH A 14 4785 19 HOH HOH . E 4 HOH A 15 4786 20 HOH HOH . E 4 HOH A 16 4787 21 HOH HOH . E 4 HOH A 17 4788 22 HOH HOH . E 4 HOH A 18 4789 23 HOH HOH . E 4 HOH A 19 4790 24 HOH HOH . F 4 HOH B 1 4771 3 HOH HOH . F 4 HOH B 2 4772 7 HOH HOH . F 4 HOH B 3 4773 8 HOH HOH . F 4 HOH B 4 4774 14 HOH HOH . F 4 HOH B 5 4775 16 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 P6G . . . C 2 -9.337 23.837 3.631 1 68.01 ? O1 P6G 4771 A 1 HETATM 2 C C2 P6G . . . C 2 -7.909 23.985 3.653 1 69.2 ? C2 P6G 4771 A 1 HETATM 3 C C3 P6G . . . C 2 -7.49 25.461 3.471 1 69.29 ? C3 P6G 4771 A 1 HETATM 4 O O4 P6G . . . C 2 -8.36 26.144 2.552 1 68.58 ? O4 P6G 4771 A 1 HETATM 5 C C5 P6G . . . C 2 -8.274 27.523 2.887 1 69.61 ? C5 P6G 4771 A 1 HETATM 6 C C6 P6G . . . C 2 -8.773 28.413 1.737 1 70.1 ? C6 P6G 4771 A 1 HETATM 7 O O7 P6G . . . C 2 -7.963 28.261 0.56 1 70.87 ? O7 P6G 4771 A 1 HETATM 8 C C8 P6G . . . C 2 -7.457 29.573 0.239 1 72.18 ? C8 P6G 4771 A 1 HETATM 9 C C9 P6G . . . C 2 -7.489 29.816 -1.285 1 74.17 ? C9 P6G 4771 A 1 HETATM 10 O O10 P6G . . . C 2 -8.494 30.798 -1.611 1 75.69 ? O10 P6G 4771 A 1 HETATM 11 C C11 P6G . . . C 2 -8.149 31.364 -2.893 1 76.69 ? C11 P6G 4771 A 1 HETATM 12 C C12 P6G . . . C 2 -9.333 32.186 -3.456 1 76.96 ? C12 P6G 4771 A 1 HETATM 13 O O13 P6G . . . C 2 -9.33 33.517 -2.916 1 76.04 ? O13 P6G 4771 A 1 HETATM 14 C C14 P6G . . . C 2 -9.74 34.404 -3.974 1 76.34 ? C14 P6G 4771 A 1 HETATM 15 C C15 P6G . . . C 2 -9.105 35.787 -3.746 1 77.26 ? C15 P6G 4771 A 1 HETATM 16 O O16 P6G . . . C 2 -7.682 35.691 -3.91 1 79.3 ? O16 P6G 4771 A 1 HETATM 17 C C17 P6G . . . C 2 -7.089 35.915 -2.622 1 79.54 ? C17 P6G 4771 A 1 HETATM 18 C C18 P6G . . . C 2 -6.158 34.743 -2.27 1 79.53 ? C18 P6G 4771 A 1 HETATM 19 O O19 P6G . . . C 2 -4.942 35.242 -1.713 1 78.45 ? O19 P6G 4771 A 1 # _model_server_stats.io_time_ms 40 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 249 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 19 #