data_2Z6J
#
_model_server_result.job_id            ngBx6bB5umMyi_zBw_NwAQ 
_model_server_result.datetime_utc      '2024-10-10 05:24:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2z6j 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":402}' 
#
_entry.id    2Z6J 
#
_exptl.entry_id    2Z6J 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              456.344 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN MONONUCLEOTIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          112.04 
_cell.angle_gamma         90 
_cell.entry_id            2Z6J 
_cell.length_a            50.63 
_cell.length_b            126.485 
_cell.length_c            53.522 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2Z6J 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O ALA 158 A ALA 158 1_555 D CA CA . A CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? 
metalc ? metalc2 A O ILE 161 A ILE 161 1_555 D CA CA . A CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? 
metalc ? metalc3 A OD1 ASN 201 A ASN 201 1_555 C CA CA . A CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? 
metalc ? metalc4 B O ALA 158 B ALA 158 1_555 I CA CA . B CA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? 
metalc ? metalc5 B O ILE 161 B ILE 161 1_555 I CA CA . B CA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.564 ? 
metalc ? metalc6 B OD1 ASN 201 B ASN 201 1_555 H CA CA . B CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.442 ? 
#
_chem_comp.formula           'C17 H21 N4 O9 P' 
_chem_comp.formula_weight    456.344 
_chem_comp.id                FMN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN MONONUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'RIBOFLAVIN MONOPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 FMN sing 70 n n 
N1 C10 FMN doub 71 n n 
C2 O2 FMN doub 72 n n 
C2 N3 FMN sing 73 n n 
N3 C4 FMN sing 74 n n 
N3 HN3 FMN sing 75 n n 
C4 O4 FMN doub 76 n n 
C4 C4A FMN sing 77 n n 
C4A N5 FMN doub 78 n n 
C4A C10 FMN sing 79 n n 
N5 C5A FMN sing 80 n n 
C5A C6 FMN doub 81 n y 
C5A C9A FMN sing 82 n y 
C6 C7 FMN sing 83 n y 
C6 H6 FMN sing 84 n n 
C7 C7M FMN sing 85 n n 
C7 C8 FMN doub 86 n y 
C7M HM71 FMN sing 87 n n 
C7M HM72 FMN sing 88 n n 
C7M HM73 FMN sing 89 n n 
C8 C8M FMN sing 90 n n 
C8 C9 FMN sing 91 n y 
C8M HM81 FMN sing 92 n n 
C8M HM82 FMN sing 93 n n 
C8M HM83 FMN sing 94 n n 
C9 C9A FMN doub 95 n y 
C9 H9 FMN sing 96 n n 
C9A N10 FMN sing 97 n n 
N10 C10 FMN sing 98 n n 
N10 C1' FMN sing 99 n n 
C1' C2' FMN sing 100 n n 
C1' "H1'1" FMN sing 101 n n 
C1' "H1'2" FMN sing 102 n n 
C2' O2' FMN sing 103 n n 
C2' C3' FMN sing 104 n n 
C2' H2' FMN sing 105 n n 
O2' HO2' FMN sing 106 n n 
C3' O3' FMN sing 107 n n 
C3' C4' FMN sing 108 n n 
C3' H3' FMN sing 109 n n 
O3' HO3' FMN sing 110 n n 
C4' O4' FMN sing 111 n n 
C4' C5' FMN sing 112 n n 
C4' H4' FMN sing 113 n n 
O4' HO4' FMN sing 114 n n 
C5' O5' FMN sing 115 n n 
C5' "H5'1" FMN sing 116 n n 
C5' "H5'2" FMN sing 117 n n 
O5' P FMN sing 118 n n 
P O1P FMN doub 119 n n 
P O2P FMN sing 120 n n 
P O3P FMN sing 121 n n 
O2P HOP2 FMN sing 122 n n 
O3P HOP3 FMN sing 123 n n 
#
_atom_sites.entry_id                     2Z6J 
_atom_sites.fract_transf_matrix[1][1]    0.019751 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.007994 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007906 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.020156 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CA A 1 602 602 CA CA . 
D 2 CA A 1 603 603 CA CA . 
E 3 FMN A 1 401 401 FMN FMN . 
F 4 TUI A 1 501 501 TUI TUI . 
G 5 MPD A 1 701 701 MPD MPD . 
H 2 CA B 1 601 601 CA CA . 
I 2 CA B 1 604 604 CA CA . 
J 3 FMN B 1 402 402 FMN FMN . 
K 4 TUI B 1 502 502 TUI TUI . 
L 6 HOH A 1 702 1 HOH HOH . 
L 6 HOH A 2 703 3 HOH HOH . 
L 6 HOH A 3 704 4 HOH HOH . 
L 6 HOH A 4 705 6 HOH HOH . 
L 6 HOH A 5 706 8 HOH HOH . 
L 6 HOH A 6 707 9 HOH HOH . 
L 6 HOH A 7 708 10 HOH HOH . 
L 6 HOH A 8 709 12 HOH HOH . 
L 6 HOH A 9 710 13 HOH HOH . 
L 6 HOH A 10 711 14 HOH HOH . 
L 6 HOH A 11 712 15 HOH HOH . 
L 6 HOH A 12 713 20 HOH HOH . 
L 6 HOH A 13 714 23 HOH HOH . 
L 6 HOH A 14 715 25 HOH HOH . 
L 6 HOH A 15 716 26 HOH HOH . 
L 6 HOH A 16 717 27 HOH HOH . 
L 6 HOH A 17 718 28 HOH HOH . 
L 6 HOH A 18 719 31 HOH HOH . 
L 6 HOH A 19 720 32 HOH HOH . 
L 6 HOH A 20 721 33 HOH HOH . 
L 6 HOH A 21 722 35 HOH HOH . 
L 6 HOH A 22 723 36 HOH HOH . 
L 6 HOH A 23 724 37 HOH HOH . 
L 6 HOH A 24 725 38 HOH HOH . 
L 6 HOH A 25 726 40 HOH HOH . 
L 6 HOH A 26 727 42 HOH HOH . 
L 6 HOH A 27 728 43 HOH HOH . 
L 6 HOH A 28 729 45 HOH HOH . 
L 6 HOH A 29 730 49 HOH HOH . 
L 6 HOH A 30 731 52 HOH HOH . 
L 6 HOH A 31 732 55 HOH HOH . 
L 6 HOH A 32 733 56 HOH HOH . 
L 6 HOH A 33 734 59 HOH HOH . 
L 6 HOH A 34 735 60 HOH HOH . 
L 6 HOH A 35 736 61 HOH HOH . 
L 6 HOH A 36 737 62 HOH HOH . 
L 6 HOH A 37 738 65 HOH HOH . 
L 6 HOH A 38 739 69 HOH HOH . 
L 6 HOH A 39 740 70 HOH HOH . 
L 6 HOH A 40 741 71 HOH HOH . 
L 6 HOH A 41 742 72 HOH HOH . 
M 6 HOH B 1 605 2 HOH HOH . 
M 6 HOH B 2 606 5 HOH HOH . 
M 6 HOH B 3 607 7 HOH HOH . 
M 6 HOH B 4 608 11 HOH HOH . 
M 6 HOH B 5 609 16 HOH HOH . 
M 6 HOH B 6 610 17 HOH HOH . 
M 6 HOH B 7 611 18 HOH HOH . 
M 6 HOH B 8 612 19 HOH HOH . 
M 6 HOH B 9 613 21 HOH HOH . 
M 6 HOH B 10 614 22 HOH HOH . 
M 6 HOH B 11 615 24 HOH HOH . 
M 6 HOH B 12 616 29 HOH HOH . 
M 6 HOH B 13 617 30 HOH HOH . 
M 6 HOH B 14 618 34 HOH HOH . 
M 6 HOH B 15 619 39 HOH HOH . 
M 6 HOH B 16 620 41 HOH HOH . 
M 6 HOH B 17 621 44 HOH HOH . 
M 6 HOH B 18 622 46 HOH HOH . 
M 6 HOH B 19 623 47 HOH HOH . 
M 6 HOH B 20 624 48 HOH HOH . 
M 6 HOH B 21 625 50 HOH HOH . 
M 6 HOH B 22 626 51 HOH HOH . 
M 6 HOH B 23 627 53 HOH HOH . 
M 6 HOH B 24 628 54 HOH HOH . 
M 6 HOH B 25 629 57 HOH HOH . 
M 6 HOH B 26 630 58 HOH HOH . 
M 6 HOH B 27 631 63 HOH HOH . 
M 6 HOH B 28 632 64 HOH HOH . 
M 6 HOH B 29 633 66 HOH HOH . 
M 6 HOH B 30 634 67 HOH HOH . 
M 6 HOH B 31 635 68 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 FMN . . . J 3 8.058 33.193 11.979 1 19.43 ? N1 FMN 402 B 1 
HETATM 2 C C2 FMN . . . J 3 8.727 34.243 12.598 1 19.6 ? C2 FMN 402 B 1 
HETATM 3 O O2 FMN . . . J 3 8.948 34.224 13.799 1 19.42 ? O2 FMN 402 B 1 
HETATM 4 N N3 FMN . . . J 3 9.156 35.33 11.871 1 19.39 ? N3 FMN 402 B 1 
HETATM 5 C C4 FMN . . . J 3 8.92 35.39 10.514 1 19.65 ? C4 FMN 402 B 1 
HETATM 6 O O4 FMN . . . J 3 9.32 36.38 9.902 1 19.75 ? O4 FMN 402 B 1 
HETATM 7 C C4A FMN . . . J 3 8.251 34.336 9.87 1 19.81 ? C4A FMN 402 B 1 
HETATM 8 N N5 FMN . . . J 3 8.003 34.387 8.514 1 19.5 ? N5 FMN 402 B 1 
HETATM 9 C C5A FMN . . . J 3 7.261 33.395 7.89 1 19.62 ? C5A FMN 402 B 1 
HETATM 10 C C6 FMN . . . J 3 6.962 33.503 6.523 1 19.43 ? C6 FMN 402 B 1 
HETATM 11 C C7 FMN . . . J 3 6.21 32.507 5.881 1 20.08 ? C7 FMN 402 B 1 
HETATM 12 C C7M FMN . . . J 3 5.879 32.627 4.414 1 18.52 ? C7M FMN 402 B 1 
HETATM 13 C C8 FMN . . . J 3 5.765 31.403 6.623 1 19.85 ? C8 FMN 402 B 1 
HETATM 14 C C8M FMN . . . J 3 4.956 30.312 5.979 1 19.7 ? C8M FMN 402 B 1 
HETATM 15 C C9 FMN . . . J 3 6.068 31.305 7.984 1 19.42 ? C9 FMN 402 B 1 
HETATM 16 C C9A FMN . . . J 3 6.82 32.291 8.629 1 19.05 ? C9A FMN 402 B 1 
HETATM 17 N N10 FMN . . . J 3 7.122 32.188 9.985 1 18.76 ? N10 FMN 402 B 1 
HETATM 18 C C10 FMN . . . J 3 7.834 33.213 10.604 1 19.21 ? C10 FMN 402 B 1 
HETATM 19 C C1' FMN . . . J 3 6.393 31.183 10.846 1 17.31 ? C1' FMN 402 B 1 
HETATM 20 C C2' FMN . . . J 3 4.965 31.584 11.247 1 15.75 ? C2' FMN 402 B 1 
HETATM 21 O O2' FMN . . . J 3 4.998 32.725 12.067 1 16.18 ? O2' FMN 402 B 1 
HETATM 22 C C3' FMN . . . J 3 4.219 30.458 11.987 1 16.46 ? C3' FMN 402 B 1 
HETATM 23 O O3' FMN . . . J 3 4.882 30.155 13.201 1 16.73 ? O3' FMN 402 B 1 
HETATM 24 C C4' FMN . . . J 3 4.1 29.178 11.158 1 16.19 ? C4' FMN 402 B 1 
HETATM 25 O O4' FMN . . . J 3 3.657 29.473 9.849 1 16.97 ? O4' FMN 402 B 1 
HETATM 26 C C5' FMN . . . J 3 3.167 28.135 11.757 1 16.53 ? C5' FMN 402 B 1 
HETATM 27 O O5' FMN . . . J 3 3.267 26.965 10.945 1 17.44 ? O5' FMN 402 B 1 
HETATM 28 P P FMN . . . J 3 2.224 26.646 9.748 1 15.78 ? P FMN 402 B 1 
HETATM 29 O O1P FMN . . . J 3 1.964 25.167 9.629 1 14.74 ? O1P FMN 402 B 1 
HETATM 30 O O2P FMN . . . J 3 2.841 27.175 8.486 1 15.36 ? O2P FMN 402 B 1 
HETATM 31 O O3P FMN . . . J 3 0.883 27.259 10.091 1 16.37 ? O3P FMN 402 B 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           19 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           260 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           31 
#