data_2Z6J # _model_server_result.job_id M9TGtfx26bG1u3iKrCEaTw _model_server_result.datetime_utc '2024-11-28 16:34:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2z6j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":502}' # _entry.id 2Z6J # _exptl.entry_id 2Z6J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 482.535 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(4-(2-((3-(5-(PYRIDIN-2-YLTHIO)THIAZOL-2-YL)UREIDO)METHYL)-1H-IMIDAZOL-4-YL)PHENOXY)ACETIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.04 _cell.angle_gamma 90 _cell.entry_id 2Z6J _cell.length_a 50.63 _cell.length_b 126.485 _cell.length_c 53.522 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2Z6J _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ALA 158 A ALA 158 1_555 D CA CA . A CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc2 A O ILE 161 A ILE 161 1_555 D CA CA . A CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? metalc ? metalc3 A OD1 ASN 201 A ASN 201 1_555 C CA CA . A CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc4 B O ALA 158 B ALA 158 1_555 I CA CA . B CA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? metalc ? metalc5 B O ILE 161 B ILE 161 1_555 I CA CA . B CA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.564 ? metalc ? metalc6 B OD1 ASN 201 B ASN 201 1_555 H CA CA . B CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.442 ? # _chem_comp.formula 'C21 H18 N6 O4 S2' _chem_comp.formula_weight 482.535 _chem_comp.id TUI _chem_comp.mon_nstd_flag . _chem_comp.name '2-(4-(2-((3-(5-(PYRIDIN-2-YLTHIO)THIAZOL-2-YL)UREIDO)METHYL)-1H-IMIDAZOL-4-YL)PHENOXY)ACETIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O21 C19 TUI doub 396 n n C19 N18 TUI sing 397 n n C19 N20 TUI sing 398 n n N20 C22 TUI sing 399 n n N20 H20 TUI sing 400 n n C22 N26 TUI doub 401 n y C22 S23 TUI sing 402 n y S23 C24 TUI sing 403 n y C24 C25 TUI doub 404 n y C24 S27 TUI sing 405 n n S27 C28 TUI sing 406 n n C28 C33 TUI sing 407 n y C28 N29 TUI doub 408 n y N29 C30 TUI sing 409 n y C30 C31 TUI doub 410 n y C30 H30 TUI sing 411 n n C31 C32 TUI sing 412 n y C31 H31 TUI sing 413 n n C32 C33 TUI doub 414 n y C32 H32 TUI sing 415 n n C33 H33 TUI sing 416 n n C25 N26 TUI sing 417 n y C25 H25 TUI sing 418 n n N18 C17 TUI sing 419 n n N18 H18 TUI sing 420 n n C17 C15 TUI sing 421 n n C17 H171 TUI sing 422 n n C17 H172 TUI sing 423 n n C15 N14 TUI sing 424 n y C15 N16 TUI doub 425 n y N16 C12 TUI sing 426 n y N14 C13 TUI sing 427 n y N14 H14 TUI sing 428 n n C13 C12 TUI doub 429 n y C13 H13 TUI sing 430 n n C12 C3 TUI sing 431 n y C3 C4 TUI sing 432 n y C3 C2 TUI doub 433 n y C2 C1 TUI sing 434 n y C2 H2 TUI sing 435 n n C1 C6 TUI doub 436 n y C1 H1 TUI sing 437 n n C4 C5 TUI doub 438 n y C4 H4 TUI sing 439 n n C5 C6 TUI sing 440 n y C5 H5 TUI sing 441 n n C6 O7 TUI sing 442 n n O7 C8 TUI sing 443 n n C8 C9 TUI sing 444 n n C8 H81 TUI sing 445 n n C8 H82 TUI sing 446 n n C9 O11 TUI sing 447 n n C9 O10 TUI doub 448 n n O11 H11 TUI sing 449 n n # _atom_sites.entry_id 2Z6J _atom_sites.fract_transf_matrix[1][1] 0.019751 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007994 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007906 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020156 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA A 1 602 602 CA CA . D 2 CA A 1 603 603 CA CA . E 3 FMN A 1 401 401 FMN FMN . F 4 TUI A 1 501 501 TUI TUI . G 5 MPD A 1 701 701 MPD MPD . H 2 CA B 1 601 601 CA CA . I 2 CA B 1 604 604 CA CA . J 3 FMN B 1 402 402 FMN FMN . K 4 TUI B 1 502 502 TUI TUI . L 6 HOH A 1 702 1 HOH HOH . L 6 HOH A 2 703 3 HOH HOH . L 6 HOH A 3 704 4 HOH HOH . L 6 HOH A 4 705 6 HOH HOH . L 6 HOH A 5 706 8 HOH HOH . L 6 HOH A 6 707 9 HOH HOH . L 6 HOH A 7 708 10 HOH HOH . L 6 HOH A 8 709 12 HOH HOH . L 6 HOH A 9 710 13 HOH HOH . L 6 HOH A 10 711 14 HOH HOH . L 6 HOH A 11 712 15 HOH HOH . L 6 HOH A 12 713 20 HOH HOH . L 6 HOH A 13 714 23 HOH HOH . L 6 HOH A 14 715 25 HOH HOH . L 6 HOH A 15 716 26 HOH HOH . L 6 HOH A 16 717 27 HOH HOH . L 6 HOH A 17 718 28 HOH HOH . L 6 HOH A 18 719 31 HOH HOH . L 6 HOH A 19 720 32 HOH HOH . L 6 HOH A 20 721 33 HOH HOH . L 6 HOH A 21 722 35 HOH HOH . L 6 HOH A 22 723 36 HOH HOH . L 6 HOH A 23 724 37 HOH HOH . L 6 HOH A 24 725 38 HOH HOH . L 6 HOH A 25 726 40 HOH HOH . L 6 HOH A 26 727 42 HOH HOH . L 6 HOH A 27 728 43 HOH HOH . L 6 HOH A 28 729 45 HOH HOH . L 6 HOH A 29 730 49 HOH HOH . L 6 HOH A 30 731 52 HOH HOH . L 6 HOH A 31 732 55 HOH HOH . L 6 HOH A 32 733 56 HOH HOH . L 6 HOH A 33 734 59 HOH HOH . L 6 HOH A 34 735 60 HOH HOH . L 6 HOH A 35 736 61 HOH HOH . L 6 HOH A 36 737 62 HOH HOH . L 6 HOH A 37 738 65 HOH HOH . L 6 HOH A 38 739 69 HOH HOH . L 6 HOH A 39 740 70 HOH HOH . L 6 HOH A 40 741 71 HOH HOH . L 6 HOH A 41 742 72 HOH HOH . M 6 HOH B 1 605 2 HOH HOH . M 6 HOH B 2 606 5 HOH HOH . M 6 HOH B 3 607 7 HOH HOH . M 6 HOH B 4 608 11 HOH HOH . M 6 HOH B 5 609 16 HOH HOH . M 6 HOH B 6 610 17 HOH HOH . M 6 HOH B 7 611 18 HOH HOH . M 6 HOH B 8 612 19 HOH HOH . M 6 HOH B 9 613 21 HOH HOH . M 6 HOH B 10 614 22 HOH HOH . M 6 HOH B 11 615 24 HOH HOH . M 6 HOH B 12 616 29 HOH HOH . M 6 HOH B 13 617 30 HOH HOH . M 6 HOH B 14 618 34 HOH HOH . M 6 HOH B 15 619 39 HOH HOH . M 6 HOH B 16 620 41 HOH HOH . M 6 HOH B 17 621 44 HOH HOH . M 6 HOH B 18 622 46 HOH HOH . M 6 HOH B 19 623 47 HOH HOH . M 6 HOH B 20 624 48 HOH HOH . M 6 HOH B 21 625 50 HOH HOH . M 6 HOH B 22 626 51 HOH HOH . M 6 HOH B 23 627 53 HOH HOH . M 6 HOH B 24 628 54 HOH HOH . M 6 HOH B 25 629 57 HOH HOH . M 6 HOH B 26 630 58 HOH HOH . M 6 HOH B 27 631 63 HOH HOH . M 6 HOH B 28 632 64 HOH HOH . M 6 HOH B 29 633 66 HOH HOH . M 6 HOH B 30 634 67 HOH HOH . M 6 HOH B 31 635 68 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O21 TUI . . . K 4 11.402 32.529 12.103 1 25.03 ? O21 TUI 502 B 1 HETATM 2 C C19 TUI . . . K 4 10.7 31.622 11.664 1 24.34 ? C19 TUI 502 B 1 HETATM 3 N N20 TUI . . . K 4 10.527 31.421 10.355 1 23.74 ? N20 TUI 502 B 1 HETATM 4 C C22 TUI . . . K 4 10.886 32.298 9.414 1 24.17 ? C22 TUI 502 B 1 HETATM 5 S S23 TUI . . . K 4 11.866 33.634 9.619 1 24.35 ? S23 TUI 502 B 1 HETATM 6 C C24 TUI . . . K 4 11.759 34.092 8.017 1 23.82 ? C24 TUI 502 B 1 HETATM 7 S S27 TUI . . . K 4 12.486 35.411 7.273 1 25.11 ? S27 TUI 502 B 1 HETATM 8 C C28 TUI . . . K 4 14.145 35.124 7.099 1 24.79 ? C28 TUI 502 B 1 HETATM 9 N N29 TUI . . . K 4 14.937 36.088 6.565 1 25.36 ? N29 TUI 502 B 1 HETATM 10 C C30 TUI . . . K 4 16.261 35.907 6.417 1 25.63 ? C30 TUI 502 B 1 HETATM 11 C C31 TUI . . . K 4 16.854 34.707 6.807 1 25.24 ? C31 TUI 502 B 1 HETATM 12 C C32 TUI . . . K 4 16.059 33.7 7.354 1 25.81 ? C32 TUI 502 B 1 HETATM 13 C C33 TUI . . . K 4 14.69 33.908 7.507 1 24.24 ? C33 TUI 502 B 1 HETATM 14 C C25 TUI . . . K 4 10.979 33.166 7.442 1 22.91 ? C25 TUI 502 B 1 HETATM 15 N N26 TUI . . . K 4 10.545 32.251 8.194 1 23.18 ? N26 TUI 502 B 1 HETATM 16 N N18 TUI . . . K 4 10.082 30.804 12.504 1 24.02 ? N18 TUI 502 B 1 HETATM 17 C C17 TUI . . . K 4 10.146 30.973 13.945 1 26.45 ? C17 TUI 502 B 1 HETATM 18 C C15 TUI . . . K 4 11.345 30.223 14.483 1 26.56 ? C15 TUI 502 B 1 HETATM 19 N N16 TUI . . . K 4 12.184 30.651 15.447 1 26.73 ? N16 TUI 502 B 1 HETATM 20 N N14 TUI . . . K 4 11.697 29.013 14.028 1 27.49 ? N14 TUI 502 B 1 HETATM 21 C C13 TUI . . . K 4 12.798 28.625 14.709 1 29.06 ? C13 TUI 502 B 1 HETATM 22 C C12 TUI . . . K 4 13.086 29.657 15.597 1 28.79 ? C12 TUI 502 B 1 HETATM 23 C C3 TUI . . . K 4 14.225 29.695 16.562 1 28.51 ? C3 TUI 502 B 1 HETATM 24 C C2 TUI . . . K 4 14.069 30.311 17.808 1 28.33 ? C2 TUI 502 B 1 HETATM 25 C C1 TUI . . . K 4 15.137 30.37 18.702 1 29.02 ? C1 TUI 502 B 1 HETATM 26 C C4 TUI . . . K 4 15.459 29.146 16.207 1 28.16 ? C4 TUI 502 B 1 HETATM 27 C C5 TUI . . . K 4 16.527 29.207 17.099 1 28.33 ? C5 TUI 502 B 1 HETATM 28 C C6 TUI . . . K 4 16.373 29.813 18.351 1 30.01 ? C6 TUI 502 B 1 HETATM 29 O O7 TUI . . . K 4 17.426 29.878 19.247 1 31.12 ? O7 TUI 502 B 1 HETATM 30 C C8 TUI . . . K 4 18.558 28.996 19.163 1 34.76 ? C8 TUI 502 B 1 HETATM 31 C C9 TUI . . . K 4 19.83 29.752 18.83 1 36.37 ? C9 TUI 502 B 1 HETATM 32 O O11 TUI . . . K 4 20.06 30.845 19.396 1 37.52 ? O11 TUI 502 B 1 HETATM 33 O O10 TUI . . . K 4 20.616 29.253 17.997 1 36.97 ? O10 TUI 502 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 33 #