data_2Z73 # _model_server_result.job_id T44uts69dy4Mmoc-Aqnl-w _model_server_result.datetime_utc '2024-11-06 01:41:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2z73 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":1001}' # _entry.id 2Z73 # _exptl.entry_id 2Z73 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 256.424 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PALMITIC ACID' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2Z73 _cell.length_a 122.55 _cell.length_b 122.55 _cell.length_c 158.74 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2Z73 _symmetry.cell_setting ? _symmetry.Int_Tables_number 171 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA monomeric 1 software_defined_assembly 3 PISA dimeric 2 software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,O 1 1 B,H,I,J,K,L,M,N,P 2 1 A,C,D,E,F,G,O 3 1 B,H,I,J,K,L,M,N,P 4 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 61.275 106.131413 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 K N N ? 4 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 108 A CYS 108 1_555 A SG CYS 186 A CYS 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf2 B SG CYS 108 B CYS 108 1_555 B SG CYS 186 B CYS 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? covale ? covale1 A NZ LYS 305 A LYS 305 1_555 D C15 RET . A RET 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale2 A SG CYS 337 A CYS 337 1_555 F C1 PLM . A PLM 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.799 ? covale ? covale3 B NZ LYS 305 B LYS 305 1_555 J C15 RET . B RET 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.312 ? covale ? covale4 B SG CYS 337 B CYS 337 1_555 L C1 PLM . B PLM 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.798 ? # _chem_comp.formula 'C16 H32 O2' _chem_comp.formula_weight 256.424 _chem_comp.id PLM _chem_comp.mon_nstd_flag . _chem_comp.name 'PALMITIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PLM sing 449 n n C1 O2 PLM doub 450 n n C1 C2 PLM sing 451 n n O1 H PLM sing 452 n n C2 C3 PLM sing 453 n n C2 H21 PLM sing 454 n n C2 H22 PLM sing 455 n n C3 C4 PLM sing 456 n n C3 H31 PLM sing 457 n n C3 H32 PLM sing 458 n n C4 C5 PLM sing 459 n n C4 H41 PLM sing 460 n n C4 H42 PLM sing 461 n n C5 C6 PLM sing 462 n n C5 H51 PLM sing 463 n n C5 H52 PLM sing 464 n n C6 C7 PLM sing 465 n n C6 H61 PLM sing 466 n n C6 H62 PLM sing 467 n n C7 C8 PLM sing 468 n n C7 H71 PLM sing 469 n n C7 H72 PLM sing 470 n n C8 C9 PLM sing 471 n n C8 H81 PLM sing 472 n n C8 H82 PLM sing 473 n n C9 CA PLM sing 474 n n C9 H91 PLM sing 475 n n C9 H92 PLM sing 476 n n CA CB PLM sing 477 n n CA HA1 PLM sing 478 n n CA HA2 PLM sing 479 n n CB CC PLM sing 480 n n CB HB1 PLM sing 481 n n CB HB2 PLM sing 482 n n CC CD PLM sing 483 n n CC HC1 PLM sing 484 n n CC HC2 PLM sing 485 n n CD CE PLM sing 486 n n CD HD1 PLM sing 487 n n CD HD2 PLM sing 488 n n CE CF PLM sing 489 n n CE HE1 PLM sing 490 n n CE HE2 PLM sing 491 n n CF CG PLM sing 492 n n CF HF1 PLM sing 493 n n CF HF2 PLM sing 494 n n CG HG1 PLM sing 495 n n CG HG2 PLM sing 496 n n CG HG3 PLM sing 497 n n # _atom_sites.entry_id 2Z73 _atom_sites.fract_transf_matrix[1][1] 0.00816 _atom_sites.fract_transf_matrix[1][2] 0.004711 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009422 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0063 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BOG A 1 1005 1005 BOG BOG . D 3 RET A 1 1000 1000 RET RET . E 4 PLM A 1 1001 1001 PLM PLM . F 4 PLM A 1 1002 1002 PLM PLM . G 5 TWT A 1 1003 1003 TWT TWT . H 2 BOG B 1 1005 1005 BOG BOG . I 6 SO4 B 1 1006 1006 SO4 SO4 . J 3 RET B 1 1000 1000 RET RET . K 4 PLM B 1 1001 1001 PLM PLM . L 4 PLM B 1 1002 1002 PLM PLM . M 5 TWT B 1 1003 1003 TWT TWT . N 7 PC1 B 1 1004 1004 PC1 PC1 . O 8 HOH A 1 500 500 HOH HOH . O 8 HOH A 2 501 501 HOH HOH . O 8 HOH A 3 502 502 HOH HOH . O 8 HOH A 4 503 503 HOH HOH . O 8 HOH A 5 504 504 HOH HOH . O 8 HOH A 6 505 505 HOH HOH . O 8 HOH A 7 506 506 HOH HOH . O 8 HOH A 8 507 507 HOH HOH . O 8 HOH A 9 508 508 HOH HOH . O 8 HOH A 10 509 509 HOH HOH . O 8 HOH A 11 510 510 HOH HOH . O 8 HOH A 12 511 511 HOH HOH . O 8 HOH A 13 512 512 HOH HOH . O 8 HOH A 14 513 513 HOH HOH . O 8 HOH A 15 514 514 HOH HOH . O 8 HOH A 16 515 515 HOH HOH . O 8 HOH A 17 516 516 HOH HOH . O 8 HOH A 18 517 517 HOH HOH . O 8 HOH A 19 518 518 HOH HOH . O 8 HOH A 20 519 519 HOH HOH . O 8 HOH A 21 520 520 HOH HOH . O 8 HOH A 22 521 521 HOH HOH . O 8 HOH A 23 522 522 HOH HOH . O 8 HOH A 24 523 523 HOH HOH . O 8 HOH A 25 524 524 HOH HOH . O 8 HOH A 26 525 525 HOH HOH . O 8 HOH A 27 526 526 HOH HOH . O 8 HOH A 28 527 527 HOH HOH . P 8 HOH B 1 500 500 HOH HOH . P 8 HOH B 2 501 501 HOH HOH . P 8 HOH B 3 502 502 HOH HOH . P 8 HOH B 4 503 503 HOH HOH . P 8 HOH B 5 504 504 HOH HOH . P 8 HOH B 6 505 505 HOH HOH . P 8 HOH B 7 506 506 HOH HOH . P 8 HOH B 8 507 507 HOH HOH . P 8 HOH B 9 508 508 HOH HOH . P 8 HOH B 10 509 509 HOH HOH . P 8 HOH B 11 510 510 HOH HOH . P 8 HOH B 12 511 511 HOH HOH . P 8 HOH B 13 512 512 HOH HOH . P 8 HOH B 14 513 513 HOH HOH . P 8 HOH B 15 514 514 HOH HOH . P 8 HOH B 16 515 515 HOH HOH . P 8 HOH B 17 516 516 HOH HOH . P 8 HOH B 18 517 517 HOH HOH . P 8 HOH B 19 518 518 HOH HOH . P 8 HOH B 20 519 519 HOH HOH . P 8 HOH B 21 520 520 HOH HOH . P 8 HOH B 22 521 521 HOH HOH . P 8 HOH B 23 522 522 HOH HOH . P 8 HOH B 24 523 523 HOH HOH . P 8 HOH B 25 524 524 HOH HOH . P 8 HOH B 26 525 525 HOH HOH . P 8 HOH B 27 526 526 HOH HOH . P 8 HOH B 28 527 527 HOH HOH . P 8 HOH B 29 528 528 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PLM . . . K 4 39.206 24.531 -8.326 1 61.28 ? C1 PLM 1001 B 1 HETATM 2 O O2 PLM . . . K 4 38.489 23.725 -8.892 1 53.04 ? O2 PLM 1001 B 1 HETATM 3 C C2 PLM . . . K 4 38.779 25.072 -6.961 1 66.49 ? C2 PLM 1001 B 1 HETATM 4 C C3 PLM . . . K 4 37.509 25.945 -7.019 1 72.18 ? C3 PLM 1001 B 1 HETATM 5 C C4 PLM . . . K 4 36.362 25.277 -6.263 1 74.61 ? C4 PLM 1001 B 1 HETATM 6 C C5 PLM . . . K 4 35.558 26.267 -5.472 1 73.68 ? C5 PLM 1001 B 1 HETATM 7 C C6 PLM . . . K 4 34.449 25.545 -4.747 1 73.71 ? C6 PLM 1001 B 1 HETATM 8 C C7 PLM . . . K 4 34.375 26.012 -3.306 1 74.65 ? C7 PLM 1001 B 1 HETATM 9 C C8 PLM . . . K 4 33.264 25.313 -2.51 1 74.52 ? C8 PLM 1001 B 1 HETATM 10 C C9 PLM . . . K 4 33.745 24.885 -1.119 1 74.58 ? C9 PLM 1001 B 1 HETATM 11 C CA PLM . . . K 4 33.214 25.783 -0.025 1 73.09 ? CA PLM 1001 B 1 HETATM 12 C CB PLM . . . K 4 34.299 26.069 0.998 1 73.09 ? CB PLM 1001 B 1 HETATM 13 C CC PLM . . . K 4 33.8 27.001 2.091 1 70.57 ? CC PLM 1001 B 1 HETATM 14 C CD PLM . . . K 4 34.892 27.281 3.102 1 68.55 ? CD PLM 1001 B 1 HETATM 15 C CE PLM . . . K 4 34.31 27.91 4.345 1 65.57 ? CE PLM 1001 B 1 HETATM 16 C CF PLM . . . K 4 35.155 27.63 5.578 1 64.57 ? CF PLM 1001 B 1 HETATM 17 C CG PLM . . . K 4 34.562 28.266 6.836 1 62.4 ? CG PLM 1001 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 17 #