data_2Z73
#
_model_server_result.job_id            '_UgPY6KDUmNFcYWv8tSw_Q' 
_model_server_result.datetime_utc      '2024-11-26 04:05:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2z73 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":1002}' 
#
_entry.id    2Z73 
#
_exptl.entry_id    2Z73 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              256.424 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PALMITIC ACID' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            2Z73 
_cell.length_a            122.55 
_cell.length_b            122.55 
_cell.length_c            158.74 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2Z73 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        171 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 62' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
PISA monomeric 1 software_defined_assembly 3 
PISA dimeric 2 software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,O 1 1 
B,H,I,J,K,L,M,N,P 2 1 
A,C,D,E,F,G,O 3 1 
B,H,I,J,K,L,M,N,P 4 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 61.275 106.131413 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 F N N 
? 4 K N N 
? 4 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 108 A CYS 108 1_555 A SG CYS 186 A CYS 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
disulf ? disulf2 B SG CYS 108 B CYS 108 1_555 B SG CYS 186 B CYS 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
covale ? covale1 A NZ LYS 305 A LYS 305 1_555 D C15 RET . A RET 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? 
covale ? covale2 A SG CYS 337 A CYS 337 1_555 F C1 PLM . A PLM 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.799 ? 
covale ? covale3 B NZ LYS 305 B LYS 305 1_555 J C15 RET . B RET 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.312 ? 
covale ? covale4 B SG CYS 337 B CYS 337 1_555 L C1 PLM . B PLM 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.798 ? 
#
_chem_comp.formula           'C16 H32 O2' 
_chem_comp.formula_weight    256.424 
_chem_comp.id                PLM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PALMITIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PLM sing 449 n n 
C1 O2 PLM doub 450 n n 
C1 C2 PLM sing 451 n n 
O1 H PLM sing 452 n n 
C2 C3 PLM sing 453 n n 
C2 H21 PLM sing 454 n n 
C2 H22 PLM sing 455 n n 
C3 C4 PLM sing 456 n n 
C3 H31 PLM sing 457 n n 
C3 H32 PLM sing 458 n n 
C4 C5 PLM sing 459 n n 
C4 H41 PLM sing 460 n n 
C4 H42 PLM sing 461 n n 
C5 C6 PLM sing 462 n n 
C5 H51 PLM sing 463 n n 
C5 H52 PLM sing 464 n n 
C6 C7 PLM sing 465 n n 
C6 H61 PLM sing 466 n n 
C6 H62 PLM sing 467 n n 
C7 C8 PLM sing 468 n n 
C7 H71 PLM sing 469 n n 
C7 H72 PLM sing 470 n n 
C8 C9 PLM sing 471 n n 
C8 H81 PLM sing 472 n n 
C8 H82 PLM sing 473 n n 
C9 CA PLM sing 474 n n 
C9 H91 PLM sing 475 n n 
C9 H92 PLM sing 476 n n 
CA CB PLM sing 477 n n 
CA HA1 PLM sing 478 n n 
CA HA2 PLM sing 479 n n 
CB CC PLM sing 480 n n 
CB HB1 PLM sing 481 n n 
CB HB2 PLM sing 482 n n 
CC CD PLM sing 483 n n 
CC HC1 PLM sing 484 n n 
CC HC2 PLM sing 485 n n 
CD CE PLM sing 486 n n 
CD HD1 PLM sing 487 n n 
CD HD2 PLM sing 488 n n 
CE CF PLM sing 489 n n 
CE HE1 PLM sing 490 n n 
CE HE2 PLM sing 491 n n 
CF CG PLM sing 492 n n 
CF HF1 PLM sing 493 n n 
CF HF2 PLM sing 494 n n 
CG HG1 PLM sing 495 n n 
CG HG2 PLM sing 496 n n 
CG HG3 PLM sing 497 n n 
#
_atom_sites.entry_id                     2Z73 
_atom_sites.fract_transf_matrix[1][1]    0.00816 
_atom_sites.fract_transf_matrix[1][2]    0.004711 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009422 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.0063 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 BOG A 1 1005 1005 BOG BOG . 
D 3 RET A 1 1000 1000 RET RET . 
E 4 PLM A 1 1001 1001 PLM PLM . 
F 4 PLM A 1 1002 1002 PLM PLM . 
G 5 TWT A 1 1003 1003 TWT TWT . 
H 2 BOG B 1 1005 1005 BOG BOG . 
I 6 SO4 B 1 1006 1006 SO4 SO4 . 
J 3 RET B 1 1000 1000 RET RET . 
K 4 PLM B 1 1001 1001 PLM PLM . 
L 4 PLM B 1 1002 1002 PLM PLM . 
M 5 TWT B 1 1003 1003 TWT TWT . 
N 7 PC1 B 1 1004 1004 PC1 PC1 . 
O 8 HOH A 1 500 500 HOH HOH . 
O 8 HOH A 2 501 501 HOH HOH . 
O 8 HOH A 3 502 502 HOH HOH . 
O 8 HOH A 4 503 503 HOH HOH . 
O 8 HOH A 5 504 504 HOH HOH . 
O 8 HOH A 6 505 505 HOH HOH . 
O 8 HOH A 7 506 506 HOH HOH . 
O 8 HOH A 8 507 507 HOH HOH . 
O 8 HOH A 9 508 508 HOH HOH . 
O 8 HOH A 10 509 509 HOH HOH . 
O 8 HOH A 11 510 510 HOH HOH . 
O 8 HOH A 12 511 511 HOH HOH . 
O 8 HOH A 13 512 512 HOH HOH . 
O 8 HOH A 14 513 513 HOH HOH . 
O 8 HOH A 15 514 514 HOH HOH . 
O 8 HOH A 16 515 515 HOH HOH . 
O 8 HOH A 17 516 516 HOH HOH . 
O 8 HOH A 18 517 517 HOH HOH . 
O 8 HOH A 19 518 518 HOH HOH . 
O 8 HOH A 20 519 519 HOH HOH . 
O 8 HOH A 21 520 520 HOH HOH . 
O 8 HOH A 22 521 521 HOH HOH . 
O 8 HOH A 23 522 522 HOH HOH . 
O 8 HOH A 24 523 523 HOH HOH . 
O 8 HOH A 25 524 524 HOH HOH . 
O 8 HOH A 26 525 525 HOH HOH . 
O 8 HOH A 27 526 526 HOH HOH . 
O 8 HOH A 28 527 527 HOH HOH . 
P 8 HOH B 1 500 500 HOH HOH . 
P 8 HOH B 2 501 501 HOH HOH . 
P 8 HOH B 3 502 502 HOH HOH . 
P 8 HOH B 4 503 503 HOH HOH . 
P 8 HOH B 5 504 504 HOH HOH . 
P 8 HOH B 6 505 505 HOH HOH . 
P 8 HOH B 7 506 506 HOH HOH . 
P 8 HOH B 8 507 507 HOH HOH . 
P 8 HOH B 9 508 508 HOH HOH . 
P 8 HOH B 10 509 509 HOH HOH . 
P 8 HOH B 11 510 510 HOH HOH . 
P 8 HOH B 12 511 511 HOH HOH . 
P 8 HOH B 13 512 512 HOH HOH . 
P 8 HOH B 14 513 513 HOH HOH . 
P 8 HOH B 15 514 514 HOH HOH . 
P 8 HOH B 16 515 515 HOH HOH . 
P 8 HOH B 17 516 516 HOH HOH . 
P 8 HOH B 18 517 517 HOH HOH . 
P 8 HOH B 19 518 518 HOH HOH . 
P 8 HOH B 20 519 519 HOH HOH . 
P 8 HOH B 21 520 520 HOH HOH . 
P 8 HOH B 22 521 521 HOH HOH . 
P 8 HOH B 23 522 522 HOH HOH . 
P 8 HOH B 24 523 523 HOH HOH . 
P 8 HOH B 25 524 524 HOH HOH . 
P 8 HOH B 26 525 525 HOH HOH . 
P 8 HOH B 27 526 526 HOH HOH . 
P 8 HOH B 28 527 527 HOH HOH . 
P 8 HOH B 29 528 528 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PLM . . . L 4 12.583 22.197 -7.802 1 105.53 ? C1 PLM 1002 B 1 
HETATM 2 O O2 PLM . . . L 4 13.224 23.15 -8.211 1 108.44 ? O2 PLM 1002 B 1 
HETATM 3 C C2 PLM . . . L 4 12.568 21.888 -6.296 1 105.72 ? C2 PLM 1002 B 1 
HETATM 4 C C3 PLM . . . L 4 13.768 21.052 -5.824 1 104.44 ? C3 PLM 1002 B 1 
HETATM 5 C C4 PLM . . . L 4 13.495 20.437 -4.457 1 105.62 ? C4 PLM 1002 B 1 
HETATM 6 C C5 PLM . . . L 4 14.507 20.876 -3.435 1 106.07 ? C5 PLM 1002 B 1 
HETATM 7 C C6 PLM . . . L 4 14.19 20.245 -2.099 1 106.66 ? C6 PLM 1002 B 1 
HETATM 8 C C7 PLM . . . L 4 13.701 21.295 -1.119 1 107.99 ? C7 PLM 1002 B 1 
HETATM 9 C C8 PLM . . . L 4 13.364 20.697 0.254 1 108.97 ? C8 PLM 1002 B 1 
HETATM 10 C C9 PLM . . . L 4 12.63 21.702 1.141 1 109.92 ? C9 PLM 1002 B 1 
HETATM 11 C CA PLM . . . L 4 11.383 21.109 1.751 1 110.98 ? CA PLM 1002 B 1 
HETATM 12 C CB PLM . . . L 4 10.608 22.164 2.509 1 111.25 ? CB PLM 1002 B 1 
HETATM 13 C CC PLM . . . L 4 9.117 22.014 2.288 1 111.7 ? CC PLM 1002 B 1 
HETATM 14 C CD PLM . . . L 4 8.357 23.074 3.056 1 111.14 ? CD PLM 1002 B 1 
HETATM 15 C CE PLM . . . L 4 7.186 23.576 2.247 1 109.82 ? CE PLM 1002 B 1 
HETATM 16 C CF PLM . . . L 4 6.958 25.067 2.447 1 109.27 ? CF PLM 1002 B 1 
HETATM 17 C CG PLM . . . L 4 5.771 25.58 1.63 1 108.76 ? CG PLM 1002 B 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           278 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           17 
#