data_2Z7L # _model_server_result.job_id B_2phAJMn_lPFrO_m1mMLw _model_server_result.datetime_utc '2024-11-18 11:40:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2z7l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":2001}' # _entry.id 2Z7L # _exptl.entry_id 2Z7L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BETA-MERCAPTOETHANOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.58 _cell.angle_gamma 90 _cell.entry_id 2Z7L _cell.length_a 48.873 _cell.length_b 69.962 _cell.length_c 60.775 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2Z7L _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 167 A CYS 161 1_555 D S2 BME . A BME 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? covale ? covale2 A SG CYS 172 A CYS 166 1_555 F S2 BME . A BME 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? covale ? covale3 A SG CYS 260 A CYS 254 1_555 E S2 BME . A BME 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id BME _chem_comp.mon_nstd_flag . _chem_comp.name BETA-MERCAPTOETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BME sing 70 n n C1 O1 BME sing 71 n n C1 H11 BME sing 72 n n C1 H12 BME sing 73 n n C2 S2 BME sing 74 n n C2 H21 BME sing 75 n n C2 H22 BME sing 76 n n O1 HO1 BME sing 77 n n S2 HS2 BME sing 78 n n # _atom_sites.entry_id 2Z7L _atom_sites.fract_transf_matrix[1][1] 0.020461 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007276 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014294 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017464 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 2100 2100 SO4 SO4 . C 3 S91 A 1 1001 1001 S91 S91 . D 4 BME A 1 2001 2001 BME SEO . E 4 BME A 1 2002 2002 BME SEO . F 4 BME A 1 2003 2003 BME SEO . G 5 HOH A 1 2101 1 HOH HOH . G 5 HOH A 2 2102 2 HOH HOH . G 5 HOH A 3 2103 4 HOH HOH . G 5 HOH A 4 2104 5 HOH HOH . G 5 HOH A 5 2105 6 HOH HOH . G 5 HOH A 6 2106 7 HOH HOH . G 5 HOH A 7 2107 8 HOH HOH . G 5 HOH A 8 2108 9 HOH HOH . G 5 HOH A 9 2109 10 HOH HOH . G 5 HOH A 10 2110 11 HOH HOH . G 5 HOH A 11 2111 12 HOH HOH . G 5 HOH A 12 2112 13 HOH HOH . G 5 HOH A 13 2113 14 HOH HOH . G 5 HOH A 14 2114 15 HOH HOH . G 5 HOH A 15 2115 16 HOH HOH . G 5 HOH A 16 2116 17 HOH HOH . G 5 HOH A 17 2117 18 HOH HOH . G 5 HOH A 18 2118 19 HOH HOH . G 5 HOH A 19 2119 20 HOH HOH . G 5 HOH A 20 2120 21 HOH HOH . G 5 HOH A 21 2121 22 HOH HOH . G 5 HOH A 22 2122 23 HOH HOH . G 5 HOH A 23 2123 24 HOH HOH . G 5 HOH A 24 2124 25 HOH HOH . G 5 HOH A 25 2125 26 HOH HOH . G 5 HOH A 26 2126 27 HOH HOH . G 5 HOH A 27 2127 28 HOH HOH . G 5 HOH A 28 2128 29 HOH HOH . G 5 HOH A 29 2129 30 HOH HOH . G 5 HOH A 30 2130 31 HOH HOH . G 5 HOH A 31 2131 32 HOH HOH . G 5 HOH A 32 2132 33 HOH HOH . G 5 HOH A 33 2133 34 HOH HOH . G 5 HOH A 34 2134 35 HOH HOH . G 5 HOH A 35 2135 36 HOH HOH . G 5 HOH A 36 2136 37 HOH HOH . G 5 HOH A 37 2137 38 HOH HOH . G 5 HOH A 38 2138 39 HOH HOH . G 5 HOH A 39 2139 40 HOH HOH . G 5 HOH A 40 2140 41 HOH HOH . G 5 HOH A 41 2141 42 HOH HOH . G 5 HOH A 42 2142 43 HOH HOH . G 5 HOH A 43 2143 44 HOH HOH . G 5 HOH A 44 2144 45 HOH HOH . G 5 HOH A 45 2145 46 HOH HOH . G 5 HOH A 46 2146 47 HOH HOH . G 5 HOH A 47 2147 48 HOH HOH . G 5 HOH A 48 2148 49 HOH HOH . G 5 HOH A 49 2149 50 HOH HOH . G 5 HOH A 50 2150 51 HOH HOH . G 5 HOH A 51 2151 52 HOH HOH . G 5 HOH A 52 2152 53 HOH HOH . G 5 HOH A 53 2153 54 HOH HOH . G 5 HOH A 54 2154 55 HOH HOH . G 5 HOH A 55 2155 56 HOH HOH . G 5 HOH A 56 2156 57 HOH HOH . G 5 HOH A 57 2157 58 HOH HOH . G 5 HOH A 58 2158 59 HOH HOH . G 5 HOH A 59 2159 60 HOH HOH . G 5 HOH A 60 2160 61 HOH HOH . G 5 HOH A 61 2161 62 HOH HOH . G 5 HOH A 62 2162 63 HOH HOH . G 5 HOH A 63 2163 64 HOH HOH . G 5 HOH A 64 2164 65 HOH HOH . G 5 HOH A 65 2165 66 HOH HOH . G 5 HOH A 66 2166 67 HOH HOH . G 5 HOH A 67 2167 68 HOH HOH . G 5 HOH A 68 2168 69 HOH HOH . G 5 HOH A 69 2169 70 HOH HOH . G 5 HOH A 70 2170 71 HOH HOH . G 5 HOH A 71 2171 72 HOH HOH . G 5 HOH A 72 2172 73 HOH HOH . G 5 HOH A 73 2173 74 HOH HOH . G 5 HOH A 74 2174 75 HOH HOH . G 5 HOH A 75 2175 76 HOH HOH . G 5 HOH A 76 2176 77 HOH HOH . G 5 HOH A 77 2177 78 HOH HOH . G 5 HOH A 78 2178 79 HOH HOH . G 5 HOH A 79 2179 80 HOH HOH . G 5 HOH A 80 2180 81 HOH HOH . G 5 HOH A 81 2181 82 HOH HOH . G 5 HOH A 82 2182 83 HOH HOH . G 5 HOH A 83 2183 84 HOH HOH . G 5 HOH A 84 2184 85 HOH HOH . G 5 HOH A 85 2185 86 HOH HOH . G 5 HOH A 86 2186 87 HOH HOH . G 5 HOH A 87 2187 88 HOH HOH . G 5 HOH A 88 2188 89 HOH HOH . G 5 HOH A 89 2189 90 HOH HOH . G 5 HOH A 90 2190 91 HOH HOH . G 5 HOH A 91 2191 92 HOH HOH . G 5 HOH A 92 2192 93 HOH HOH . G 5 HOH A 93 2193 94 HOH HOH . G 5 HOH A 94 2194 95 HOH HOH . G 5 HOH A 95 2195 96 HOH HOH . G 5 HOH A 96 2196 97 HOH HOH . G 5 HOH A 97 2197 98 HOH HOH . G 5 HOH A 98 2198 99 HOH HOH . G 5 HOH A 99 2199 100 HOH HOH . G 5 HOH A 100 2200 101 HOH HOH . G 5 HOH A 101 2201 102 HOH HOH . G 5 HOH A 102 2202 103 HOH HOH . G 5 HOH A 103 2203 104 HOH HOH . G 5 HOH A 104 2204 105 HOH HOH . G 5 HOH A 105 2205 106 HOH HOH . G 5 HOH A 106 2206 107 HOH HOH . G 5 HOH A 107 2207 108 HOH HOH . G 5 HOH A 108 2208 109 HOH HOH . G 5 HOH A 109 2209 110 HOH HOH . G 5 HOH A 110 2210 111 HOH HOH . G 5 HOH A 111 2211 112 HOH HOH . G 5 HOH A 112 2212 113 HOH HOH . G 5 HOH A 113 2213 114 HOH HOH . G 5 HOH A 114 2214 115 HOH HOH . G 5 HOH A 115 2215 116 HOH HOH . G 5 HOH A 116 2216 117 HOH HOH . G 5 HOH A 117 2217 118 HOH HOH . G 5 HOH A 118 2218 119 HOH HOH . G 5 HOH A 119 2219 120 HOH HOH . G 5 HOH A 120 2220 121 HOH HOH . G 5 HOH A 121 2221 122 HOH HOH . G 5 HOH A 122 2222 123 HOH HOH . G 5 HOH A 123 2223 124 HOH HOH . G 5 HOH A 124 2224 125 HOH HOH . G 5 HOH A 125 2225 126 HOH HOH . G 5 HOH A 126 2226 127 HOH HOH . G 5 HOH A 127 2227 128 HOH HOH . G 5 HOH A 128 2228 129 HOH HOH . G 5 HOH A 129 2229 130 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BME . . . D 4 27.218 1.81 3.614 1 41.38 ? C1 BME 2001 A 1 HETATM 2 C C2 BME . . . D 4 25.779 1.415 3.392 1 38.51 ? C2 BME 2001 A 1 HETATM 3 O O1 BME . . . D 4 27.593 3.008 2.895 1 43.8 ? O1 BME 2001 A 1 HETATM 4 S S2 BME . . . D 4 25.686 1.004 1.625 1 38.56 ? S2 BME 2001 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #