data_2Z9C # _model_server_result.job_id GoJoZJ2lcWckS5wizcD9sA _model_server_result.datetime_utc '2024-11-01 18:31:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2z9c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 2Z9C # _exptl.entry_id 2Z9C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2Z9C _cell.length_a 95.5 _cell.length_b 95.5 _cell.length_c 54.497 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2Z9C _symmetry.cell_setting ? _symmetry.Int_Tables_number 90 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 4 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z 0 -1 0 -1 0 0 0 0 -1 95.5 95.5 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 210 n n C1 C2 GOL sing 211 n n C1 H11 GOL sing 212 n n C1 H12 GOL sing 213 n n O1 HO1 GOL sing 214 n n C2 O2 GOL sing 215 n n C2 C3 GOL sing 216 n n C2 H2 GOL sing 217 n n O2 HO2 GOL sing 218 n n C3 O3 GOL sing 219 n n C3 H31 GOL sing 220 n n C3 H32 GOL sing 221 n n O3 HO3 GOL sing 222 n n # _atom_sites.entry_id 2Z9C _atom_sites.fract_transf_matrix[1][1] 0.010471 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010471 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01835 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMN A 1 201 201 FMN FMN . C 3 DTC A 1 202 202 DTC DTC . D 4 GOL A 1 203 203 GOL GOL . E 5 HOH A 1 204 1 HOH HOH . E 5 HOH A 2 205 2 HOH HOH . E 5 HOH A 3 206 3 HOH HOH . E 5 HOH A 4 207 4 HOH HOH . E 5 HOH A 5 208 5 HOH HOH . E 5 HOH A 6 209 6 HOH HOH . E 5 HOH A 7 210 7 HOH HOH . E 5 HOH A 8 211 8 HOH HOH . E 5 HOH A 9 212 9 HOH HOH . E 5 HOH A 10 213 10 HOH HOH . E 5 HOH A 11 214 11 HOH HOH . E 5 HOH A 12 215 12 HOH HOH . E 5 HOH A 13 216 13 HOH HOH . E 5 HOH A 14 217 14 HOH HOH . E 5 HOH A 15 218 15 HOH HOH . E 5 HOH A 16 219 16 HOH HOH . E 5 HOH A 17 220 17 HOH HOH . E 5 HOH A 18 221 18 HOH HOH . E 5 HOH A 19 222 19 HOH HOH . E 5 HOH A 20 223 20 HOH HOH . E 5 HOH A 21 224 21 HOH HOH . E 5 HOH A 22 225 22 HOH HOH . E 5 HOH A 23 226 23 HOH HOH . E 5 HOH A 24 227 24 HOH HOH . E 5 HOH A 25 228 25 HOH HOH . E 5 HOH A 26 229 26 HOH HOH . E 5 HOH A 27 230 27 HOH HOH . E 5 HOH A 28 231 28 HOH HOH . E 5 HOH A 29 232 29 HOH HOH . E 5 HOH A 30 233 30 HOH HOH . E 5 HOH A 31 234 31 HOH HOH . E 5 HOH A 32 235 32 HOH HOH . E 5 HOH A 33 236 33 HOH HOH . E 5 HOH A 34 237 34 HOH HOH . E 5 HOH A 35 238 35 HOH HOH . E 5 HOH A 36 239 36 HOH HOH . E 5 HOH A 37 240 37 HOH HOH . E 5 HOH A 38 241 38 HOH HOH . E 5 HOH A 39 242 39 HOH HOH . E 5 HOH A 40 243 40 HOH HOH . E 5 HOH A 41 244 41 HOH HOH . E 5 HOH A 42 245 42 HOH HOH . E 5 HOH A 43 246 43 HOH HOH . E 5 HOH A 44 247 44 HOH HOH . E 5 HOH A 45 248 45 HOH HOH . E 5 HOH A 46 249 46 HOH HOH . E 5 HOH A 47 250 47 HOH HOH . E 5 HOH A 48 251 48 HOH HOH . E 5 HOH A 49 252 49 HOH HOH . E 5 HOH A 50 253 50 HOH HOH . E 5 HOH A 51 254 51 HOH HOH . E 5 HOH A 52 255 52 HOH HOH . E 5 HOH A 53 256 53 HOH HOH . E 5 HOH A 54 257 54 HOH HOH . E 5 HOH A 55 258 55 HOH HOH . E 5 HOH A 56 259 56 HOH HOH . E 5 HOH A 57 260 57 HOH HOH . E 5 HOH A 58 261 58 HOH HOH . E 5 HOH A 59 262 59 HOH HOH . E 5 HOH A 60 263 60 HOH HOH . E 5 HOH A 61 264 61 HOH HOH . E 5 HOH A 62 265 62 HOH HOH . E 5 HOH A 63 266 63 HOH HOH . E 5 HOH A 64 267 64 HOH HOH . E 5 HOH A 65 268 65 HOH HOH . E 5 HOH A 66 269 66 HOH HOH . E 5 HOH A 67 270 67 HOH HOH . E 5 HOH A 68 271 68 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 4 79.987 13.906 -0.285 0.5 36.33 ? C1 GOL 203 A 1 HETATM 2 O O1 GOL . . . D 4 80.033 12.497 -0.178 0.5 37.22 ? O1 GOL 203 A 1 HETATM 3 C C2 GOL . . . D 4 81.389 14.513 -0.387 0.5 36.21 ? C2 GOL 203 A 1 HETATM 4 O O2 GOL . . . D 4 82.344 13.512 -0.66 0.5 35.56 ? O2 GOL 203 A 1 HETATM 5 C C3 GOL . . . D 4 81.789 15.244 0.894 0.5 36.16 ? C3 GOL 203 A 1 HETATM 6 O O3 GOL . . . D 4 82.913 16.078 0.677 0.5 36.62 ? O3 GOL 203 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #