data_2ZA8 # _model_server_result.job_id 7zMCUUlMV7mc0aoPfyNyXA _model_server_result.datetime_utc '2025-03-06 10:19:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2za8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":2}' # _entry.id 2ZA8 # _exptl.entry_id 2ZA8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 112.411 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CADMIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2ZA8 _cell.length_a 180.21 _cell.length_b 180.21 _cell.length_c 180.21 _cell.Z_PDB 96 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ZA8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 209 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'F 4 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details 24-meric _pdbx_struct_assembly.oligomeric_count 24 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 22_565 z,-y+1,x 0 0 1 0 -1 0 1 0 0 0 180.21 0 3 'crystal symmetry operation' 29_554 z,x+1/2,y-1/2 0 0 1 1 0 0 0 1 0 0 90.105 -90.105 4 'crystal symmetry operation' 41_555 x,z+1/2,-y+1/2 1 0 0 0 0 1 0 -1 0 0 90.105 90.105 5 'crystal symmetry operation' 44_554 x,-z+1/2,y-1/2 1 0 0 0 0 -1 0 1 0 0 90.105 -90.105 6 'crystal symmetry operation' 30_555 z,-x+1/2,-y+1/2 0 0 1 -1 0 0 0 -1 0 0 90.105 90.105 7 'crystal symmetry operation' 87_455 y-1/2,-x+1/2,z 0 1 0 -1 0 0 0 0 1 -90.105 90.105 0 8 'crystal symmetry operation' 84_555 -y+1/2,-z+1/2,x 0 -1 0 0 0 -1 1 0 0 90.105 90.105 0 9 'crystal symmetry operation' 88_555 -y+1/2,x+1/2,z 0 -1 0 1 0 0 0 0 1 90.105 90.105 0 10 'crystal symmetry operation' 81_455 y-1/2,z+1/2,x 0 1 0 0 0 1 1 0 0 -90.105 90.105 0 11 'crystal symmetry operation' 85_455 y-1/2,x+1/2,-z 0 1 0 1 0 0 0 0 -1 -90.105 90.105 0 12 'crystal symmetry operation' 82_555 -y+1/2,z+1/2,-x 0 -1 0 0 0 1 -1 0 0 90.105 90.105 0 13 'crystal symmetry operation' 4_565 x,-y+1,-z 1 0 0 0 -1 0 0 0 -1 0 180.21 0 14 'crystal symmetry operation' 21_555 z,y,-x 0 0 1 0 1 0 -1 0 0 0 0 0 15 'crystal symmetry operation' 86_555 -y+1/2,-x+1/2,-z 0 -1 0 -1 0 0 0 0 -1 90.105 90.105 0 16 'crystal symmetry operation' 83_455 y-1/2,-z+1/2,-x 0 1 0 0 0 -1 -1 0 0 -90.105 90.105 0 17 'crystal symmetry operation' 31_554 -z,-x+1/2,y-1/2 0 0 -1 -1 0 0 0 1 0 0 90.105 -90.105 18 'crystal symmetry operation' 43_555 -x,-z+1/2,-y+1/2 -1 0 0 0 0 -1 0 -1 0 0 90.105 90.105 19 'crystal symmetry operation' 2_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 0 180.21 0 20 'crystal symmetry operation' 23_555 -z,y,x 0 0 -1 0 1 0 1 0 0 0 0 0 21 'crystal symmetry operation' 42_554 -x,z+1/2,y-1/2 -1 0 0 0 0 1 0 1 0 0 90.105 -90.105 22 'crystal symmetry operation' 32_555 -z,x+1/2,-y+1/2 0 0 -1 1 0 0 0 -1 0 0 90.105 90.105 23 'crystal symmetry operation' 3_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 24 'crystal symmetry operation' 24_565 -z,-y+1,-x 0 0 -1 0 -1 0 -1 0 0 0 180.21 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B CD CD . A CD 1 1_555 A OD1 ASP 31 A ASP 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc2 B CD CD . A CD 1 1_555 A OE1 GLU 38 A GLU 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? metalc ? metalc3 B CD CD . A CD 1 1_555 A OE2 GLU 38 A GLU 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? metalc ? metalc4 B CD CD . A CD 1 1_555 D O HOH . A HOH 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? metalc ? metalc5 B CD CD . A CD 1 1_555 D O HOH . A HOH 192 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? metalc ? metalc6 C CD CD . A CD 2 1_555 A OE2 GLU 38 A GLU 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc7 C CD CD . A CD 2 1_555 A NE2 HIS 42 A HIS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? metalc ? metalc8 C CD CD . A CD 2 1_555 D O HOH . A HOH 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc9 C CD CD . A CD 2 1_555 D O HOH . A HOH 271 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? # _chem_comp.formula 'Cd 2' _chem_comp.formula_weight 112.411 _chem_comp.id CD _chem_comp.mon_nstd_flag . _chem_comp.name 'CADMIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2ZA8 _atom_sites.fract_transf_matrix[1][1] 0.005549 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005549 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005549 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CD A 1 1 1 CD CD . C 2 CD A 1 2 2 CD CD . D 3 HOH A 1 176 1 HOH HOH . D 3 HOH A 2 177 2 HOH HOH . D 3 HOH A 3 178 3 HOH HOH . D 3 HOH A 4 179 4 HOH HOH . D 3 HOH A 5 180 5 HOH HOH . D 3 HOH A 6 181 6 HOH HOH . D 3 HOH A 7 182 7 HOH HOH . D 3 HOH A 8 183 8 HOH HOH . D 3 HOH A 9 184 9 HOH HOH . D 3 HOH A 10 185 10 HOH HOH . D 3 HOH A 11 186 11 HOH HOH . D 3 HOH A 12 187 12 HOH HOH . D 3 HOH A 13 188 13 HOH HOH . D 3 HOH A 14 189 14 HOH HOH . D 3 HOH A 15 190 15 HOH HOH . D 3 HOH A 16 191 16 HOH HOH . D 3 HOH A 17 192 17 HOH HOH . D 3 HOH A 18 193 18 HOH HOH . D 3 HOH A 19 194 19 HOH HOH . D 3 HOH A 20 195 20 HOH HOH . D 3 HOH A 21 196 21 HOH HOH . D 3 HOH A 22 197 22 HOH HOH . D 3 HOH A 23 198 23 HOH HOH . D 3 HOH A 24 199 24 HOH HOH . D 3 HOH A 25 200 25 HOH HOH . D 3 HOH A 26 201 26 HOH HOH . D 3 HOH A 27 202 27 HOH HOH . D 3 HOH A 28 203 28 HOH HOH . D 3 HOH A 29 204 29 HOH HOH . D 3 HOH A 30 205 30 HOH HOH . D 3 HOH A 31 206 31 HOH HOH . D 3 HOH A 32 207 32 HOH HOH . D 3 HOH A 33 208 33 HOH HOH . D 3 HOH A 34 209 34 HOH HOH . D 3 HOH A 35 210 35 HOH HOH . D 3 HOH A 36 211 36 HOH HOH . D 3 HOH A 37 212 37 HOH HOH . D 3 HOH A 38 213 38 HOH HOH . D 3 HOH A 39 214 39 HOH HOH . D 3 HOH A 40 215 40 HOH HOH . D 3 HOH A 41 216 41 HOH HOH . D 3 HOH A 42 217 42 HOH HOH . D 3 HOH A 43 218 43 HOH HOH . D 3 HOH A 44 219 44 HOH HOH . D 3 HOH A 45 220 45 HOH HOH . D 3 HOH A 46 221 46 HOH HOH . D 3 HOH A 47 222 47 HOH HOH . D 3 HOH A 48 223 48 HOH HOH . D 3 HOH A 49 224 49 HOH HOH . D 3 HOH A 50 225 50 HOH HOH . D 3 HOH A 51 226 51 HOH HOH . D 3 HOH A 52 227 52 HOH HOH . D 3 HOH A 53 228 53 HOH HOH . D 3 HOH A 54 229 54 HOH HOH . D 3 HOH A 55 230 55 HOH HOH . D 3 HOH A 56 231 56 HOH HOH . D 3 HOH A 57 232 57 HOH HOH . D 3 HOH A 58 233 58 HOH HOH . D 3 HOH A 59 234 59 HOH HOH . D 3 HOH A 60 235 60 HOH HOH . D 3 HOH A 61 236 61 HOH HOH . D 3 HOH A 62 237 62 HOH HOH . D 3 HOH A 63 238 63 HOH HOH . D 3 HOH A 64 239 64 HOH HOH . D 3 HOH A 65 240 65 HOH HOH . D 3 HOH A 66 241 66 HOH HOH . D 3 HOH A 67 242 67 HOH HOH . D 3 HOH A 68 243 68 HOH HOH . D 3 HOH A 69 244 69 HOH HOH . D 3 HOH A 70 245 70 HOH HOH . D 3 HOH A 71 246 71 HOH HOH . D 3 HOH A 72 247 72 HOH HOH . D 3 HOH A 73 248 73 HOH HOH . D 3 HOH A 74 249 74 HOH HOH . D 3 HOH A 75 250 75 HOH HOH . D 3 HOH A 76 251 76 HOH HOH . D 3 HOH A 77 252 77 HOH HOH . D 3 HOH A 78 253 78 HOH HOH . D 3 HOH A 79 254 79 HOH HOH . D 3 HOH A 80 255 80 HOH HOH . D 3 HOH A 81 256 81 HOH HOH . D 3 HOH A 82 257 82 HOH HOH . D 3 HOH A 83 258 83 HOH HOH . D 3 HOH A 84 259 84 HOH HOH . D 3 HOH A 85 260 85 HOH HOH . D 3 HOH A 86 261 86 HOH HOH . D 3 HOH A 87 262 87 HOH HOH . D 3 HOH A 88 263 88 HOH HOH . D 3 HOH A 89 264 89 HOH HOH . D 3 HOH A 90 265 90 HOH HOH . D 3 HOH A 91 266 91 HOH HOH . D 3 HOH A 92 267 92 HOH HOH . D 3 HOH A 93 268 93 HOH HOH . D 3 HOH A 94 269 94 HOH HOH . D 3 HOH A 95 270 95 HOH HOH . D 3 HOH A 96 271 96 HOH HOH . D 3 HOH A 97 272 97 HOH HOH . D 3 HOH A 98 273 98 HOH HOH . D 3 HOH A 99 274 99 HOH HOH . D 3 HOH A 100 275 100 HOH HOH . D 3 HOH A 101 276 101 HOH HOH . D 3 HOH A 102 277 102 HOH HOH . D 3 HOH A 103 278 103 HOH HOH . D 3 HOH A 104 279 104 HOH HOH . D 3 HOH A 105 280 105 HOH HOH . D 3 HOH A 106 281 106 HOH HOH . D 3 HOH A 107 282 107 HOH HOH . D 3 HOH A 108 283 108 HOH HOH . D 3 HOH A 109 284 109 HOH HOH . D 3 HOH A 110 285 110 HOH HOH . D 3 HOH A 111 286 111 HOH HOH . D 3 HOH A 112 287 112 HOH HOH . D 3 HOH A 113 288 113 HOH HOH . D 3 HOH A 114 289 114 HOH HOH . D 3 HOH A 115 290 115 HOH HOH . D 3 HOH A 116 291 116 HOH HOH . D 3 HOH A 117 292 117 HOH HOH . D 3 HOH A 118 293 118 HOH HOH . D 3 HOH A 119 294 119 HOH HOH . D 3 HOH A 120 295 120 HOH HOH . D 3 HOH A 121 296 121 HOH HOH . D 3 HOH A 122 297 122 HOH HOH . D 3 HOH A 123 298 123 HOH HOH . D 3 HOH A 124 299 124 HOH HOH . D 3 HOH A 125 300 125 HOH HOH . D 3 HOH A 126 301 126 HOH HOH . D 3 HOH A 127 302 127 HOH HOH . D 3 HOH A 128 303 128 HOH HOH . D 3 HOH A 129 304 129 HOH HOH . D 3 HOH A 130 305 130 HOH HOH . D 3 HOH A 131 306 131 HOH HOH . D 3 HOH A 132 307 132 HOH HOH . D 3 HOH A 133 308 133 HOH HOH . D 3 HOH A 134 309 134 HOH HOH . D 3 HOH A 135 310 135 HOH HOH . D 3 HOH A 136 311 136 HOH HOH . D 3 HOH A 137 312 137 HOH HOH . D 3 HOH A 138 313 138 HOH HOH . D 3 HOH A 139 314 139 HOH HOH . D 3 HOH A 140 315 140 HOH HOH . D 3 HOH A 141 316 141 HOH HOH . D 3 HOH A 142 317 142 HOH HOH . D 3 HOH A 143 318 143 HOH HOH . D 3 HOH A 144 319 144 HOH HOH . D 3 HOH A 145 320 145 HOH HOH . D 3 HOH A 146 321 146 HOH HOH . D 3 HOH A 147 322 147 HOH HOH . D 3 HOH A 148 323 148 HOH HOH . D 3 HOH A 149 324 149 HOH HOH . D 3 HOH A 150 325 150 HOH HOH . D 3 HOH A 151 326 151 HOH HOH . D 3 HOH A 152 327 152 HOH HOH . D 3 HOH A 153 328 153 HOH HOH . D 3 HOH A 154 329 154 HOH HOH . D 3 HOH A 155 330 155 HOH HOH . D 3 HOH A 156 331 156 HOH HOH . D 3 HOH A 157 332 157 HOH HOH . D 3 HOH A 158 333 158 HOH HOH . D 3 HOH A 159 334 159 HOH HOH . D 3 HOH A 160 335 160 HOH HOH . D 3 HOH A 161 336 161 HOH HOH . D 3 HOH A 162 337 162 HOH HOH . D 3 HOH A 163 338 163 HOH HOH . D 3 HOH A 164 339 164 HOH HOH . D 3 HOH A 165 340 165 HOH HOH . D 3 HOH A 166 341 166 HOH HOH . D 3 HOH A 167 342 167 HOH HOH . D 3 HOH A 168 343 168 HOH HOH . D 3 HOH A 169 344 169 HOH HOH . D 3 HOH A 170 345 170 HOH HOH . D 3 HOH A 171 346 171 HOH HOH . D 3 HOH A 172 347 172 HOH HOH . D 3 HOH A 173 348 173 HOH HOH . D 3 HOH A 174 349 174 HOH HOH . D 3 HOH A 175 350 175 HOH HOH . D 3 HOH A 176 351 176 HOH HOH . D 3 HOH A 177 352 177 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CD _atom_site.label_atom_id CD _atom_site.label_comp_id CD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 36.569 _atom_site.Cartn_y 97.376 _atom_site.Cartn_z 16.325 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 25.04 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CD _atom_site.auth_comp_id CD _atom_site.auth_seq_id 2 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #