data_2ZAK # _model_server_result.job_id 1GFFn35a2bKujbmb0TapmA _model_server_result.datetime_utc '2024-11-08 11:55:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2zak # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1}' # _entry.id 2ZAK # _exptl.entry_id 2ZAK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2ZAK _cell.length_a 51.35 _cell.length_b 77.78 _cell.length_c 147.93 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ZAK _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O LEU 59 A LEU 60 1_555 C NA NA . A NA 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.671 ? metalc ? metalc2 A O GLU 60 A GLU 61 1_555 C NA NA . A NA 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? metalc ? metalc3 A O CYS 62 A CYS 63 1_555 C NA NA . A NA 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc4 A O PHE 65 A PHE 66 1_555 C NA NA . A NA 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.514 ? metalc ? metalc5 A O ALA 67 A ALA 68 1_555 C NA NA . A NA 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc6 A O ILE 69 A ILE 70 1_555 C NA NA . A NA 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc7 B O LEU 59 B LEU 60 1_555 F NA NA . B NA 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.586 ? metalc ? metalc8 B O GLU 60 B GLU 61 1_555 F NA NA . B NA 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.5 ? metalc ? metalc9 B O CYS 62 B CYS 63 1_555 F NA NA . B NA 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc10 B O PHE 65 B PHE 66 1_555 F NA NA . B NA 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.779 ? metalc ? metalc11 B O ALA 67 B ALA 68 1_555 F NA NA . B NA 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.452 ? metalc ? metalc12 B O ILE 69 B ILE 70 1_555 F NA NA . B NA 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 334 n n C C2 TRS sing 335 n n C C3 TRS sing 336 n n C N TRS sing 337 n n C1 O1 TRS sing 338 n n C1 H11 TRS sing 339 n n C1 H12 TRS sing 340 n n C2 O2 TRS sing 341 n n C2 H21 TRS sing 342 n n C2 H22 TRS sing 343 n n C3 O3 TRS sing 344 n n C3 H31 TRS sing 345 n n C3 H32 TRS sing 346 n n N HN1 TRS sing 347 n n N HN2 TRS sing 348 n n N HN3 TRS sing 349 n n O1 HO1 TRS sing 350 n n O2 HO2 TRS sing 351 n n O3 HO3 TRS sing 352 n n # _atom_sites.entry_id 2ZAK _atom_sites.fract_transf_matrix[1][1] 0.019474 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012857 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00676 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NA A 1 322 322 NA NA . D 3 CL A 1 323 323 CL CL . E 4 TRS A 1 1 1 TRS TRS . F 2 NA B 1 322 322 NA NA . G 3 CL B 1 323 323 CL CL . H 5 HOH A 1 324 324 HOH HOH . H 5 HOH A 2 325 325 HOH HOH . H 5 HOH A 3 326 326 HOH HOH . H 5 HOH A 4 327 327 HOH HOH . H 5 HOH A 5 328 328 HOH HOH . H 5 HOH A 6 329 329 HOH HOH . H 5 HOH A 7 330 330 HOH HOH . H 5 HOH A 8 331 331 HOH HOH . H 5 HOH A 9 332 332 HOH HOH . H 5 HOH A 10 333 333 HOH HOH . H 5 HOH A 11 334 334 HOH HOH . H 5 HOH A 12 335 335 HOH HOH . H 5 HOH A 13 336 336 HOH HOH . H 5 HOH A 14 337 337 HOH HOH . H 5 HOH A 15 338 338 HOH HOH . H 5 HOH A 16 339 339 HOH HOH . H 5 HOH A 17 340 340 HOH HOH . H 5 HOH A 18 341 341 HOH HOH . H 5 HOH A 19 342 342 HOH HOH . H 5 HOH A 20 343 343 HOH HOH . H 5 HOH A 21 344 344 HOH HOH . H 5 HOH A 22 345 345 HOH HOH . H 5 HOH A 23 346 346 HOH HOH . H 5 HOH A 24 347 347 HOH HOH . H 5 HOH A 25 348 348 HOH HOH . H 5 HOH A 26 349 349 HOH HOH . H 5 HOH A 27 350 350 HOH HOH . H 5 HOH A 28 351 351 HOH HOH . H 5 HOH A 29 352 352 HOH HOH . H 5 HOH A 30 353 353 HOH HOH . H 5 HOH A 31 354 354 HOH HOH . H 5 HOH A 32 355 355 HOH HOH . H 5 HOH A 33 356 356 HOH HOH . H 5 HOH A 34 357 357 HOH HOH . H 5 HOH A 35 358 358 HOH HOH . H 5 HOH A 36 359 359 HOH HOH . H 5 HOH A 37 360 360 HOH HOH . H 5 HOH A 38 361 361 HOH HOH . H 5 HOH A 39 362 362 HOH HOH . H 5 HOH A 40 363 363 HOH HOH . H 5 HOH A 41 364 364 HOH HOH . H 5 HOH A 42 365 365 HOH HOH . H 5 HOH A 43 366 366 HOH HOH . H 5 HOH A 44 367 367 HOH HOH . H 5 HOH A 45 368 368 HOH HOH . H 5 HOH A 46 369 369 HOH HOH . H 5 HOH A 47 370 370 HOH HOH . H 5 HOH A 48 371 371 HOH HOH . H 5 HOH A 49 372 372 HOH HOH . H 5 HOH A 50 373 373 HOH HOH . H 5 HOH A 51 374 374 HOH HOH . H 5 HOH A 52 375 375 HOH HOH . H 5 HOH A 53 376 376 HOH HOH . H 5 HOH A 54 377 377 HOH HOH . H 5 HOH A 55 378 378 HOH HOH . H 5 HOH A 56 379 379 HOH HOH . H 5 HOH A 57 380 380 HOH HOH . H 5 HOH A 58 381 381 HOH HOH . H 5 HOH A 59 382 382 HOH HOH . H 5 HOH A 60 383 383 HOH HOH . H 5 HOH A 61 384 384 HOH HOH . H 5 HOH A 62 385 385 HOH HOH . H 5 HOH A 63 386 386 HOH HOH . H 5 HOH A 64 387 387 HOH HOH . H 5 HOH A 65 388 388 HOH HOH . H 5 HOH A 66 389 389 HOH HOH . H 5 HOH A 67 390 390 HOH HOH . H 5 HOH A 68 391 391 HOH HOH . H 5 HOH A 69 392 392 HOH HOH . H 5 HOH A 70 393 393 HOH HOH . H 5 HOH A 71 394 394 HOH HOH . H 5 HOH A 72 395 395 HOH HOH . H 5 HOH A 73 396 396 HOH HOH . H 5 HOH A 74 397 397 HOH HOH . H 5 HOH A 75 398 398 HOH HOH . H 5 HOH A 76 399 399 HOH HOH . H 5 HOH A 77 400 400 HOH HOH . H 5 HOH A 78 401 401 HOH HOH . H 5 HOH A 79 402 402 HOH HOH . H 5 HOH A 80 403 403 HOH HOH . H 5 HOH A 81 404 404 HOH HOH . H 5 HOH A 82 405 405 HOH HOH . I 5 HOH B 1 324 324 HOH HOH . I 5 HOH B 2 325 325 HOH HOH . I 5 HOH B 3 326 326 HOH HOH . I 5 HOH B 4 327 327 HOH HOH . I 5 HOH B 5 328 328 HOH HOH . I 5 HOH B 6 329 329 HOH HOH . I 5 HOH B 7 330 330 HOH HOH . I 5 HOH B 8 331 331 HOH HOH . I 5 HOH B 9 332 332 HOH HOH . I 5 HOH B 10 333 333 HOH HOH . I 5 HOH B 11 334 334 HOH HOH . I 5 HOH B 12 335 335 HOH HOH . I 5 HOH B 13 336 336 HOH HOH . I 5 HOH B 14 337 337 HOH HOH . I 5 HOH B 15 338 338 HOH HOH . I 5 HOH B 16 339 339 HOH HOH . I 5 HOH B 17 340 340 HOH HOH . I 5 HOH B 18 341 341 HOH HOH . I 5 HOH B 19 342 342 HOH HOH . I 5 HOH B 20 343 343 HOH HOH . I 5 HOH B 21 344 344 HOH HOH . I 5 HOH B 22 345 345 HOH HOH . I 5 HOH B 23 346 346 HOH HOH . I 5 HOH B 24 347 347 HOH HOH . I 5 HOH B 25 348 348 HOH HOH . I 5 HOH B 26 349 349 HOH HOH . I 5 HOH B 27 350 350 HOH HOH . I 5 HOH B 28 351 351 HOH HOH . I 5 HOH B 29 352 352 HOH HOH . I 5 HOH B 30 353 353 HOH HOH . I 5 HOH B 31 354 354 HOH HOH . I 5 HOH B 32 355 355 HOH HOH . I 5 HOH B 33 356 356 HOH HOH . I 5 HOH B 34 357 357 HOH HOH . I 5 HOH B 35 358 358 HOH HOH . I 5 HOH B 36 359 359 HOH HOH . I 5 HOH B 37 360 360 HOH HOH . I 5 HOH B 38 361 361 HOH HOH . I 5 HOH B 39 362 362 HOH HOH . I 5 HOH B 40 363 363 HOH HOH . I 5 HOH B 41 364 364 HOH HOH . I 5 HOH B 42 365 365 HOH HOH . I 5 HOH B 43 366 366 HOH HOH . I 5 HOH B 44 367 367 HOH HOH . I 5 HOH B 45 368 368 HOH HOH . I 5 HOH B 46 369 369 HOH HOH . I 5 HOH B 47 370 370 HOH HOH . I 5 HOH B 48 371 371 HOH HOH . I 5 HOH B 49 372 372 HOH HOH . I 5 HOH B 50 373 373 HOH HOH . I 5 HOH B 51 374 374 HOH HOH . I 5 HOH B 52 375 375 HOH HOH . I 5 HOH B 53 376 376 HOH HOH . I 5 HOH B 54 377 377 HOH HOH . I 5 HOH B 55 378 378 HOH HOH . I 5 HOH B 56 379 379 HOH HOH . I 5 HOH B 57 380 380 HOH HOH . I 5 HOH B 58 381 381 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . E 4 9.29 -27.386 77.283 1 53.74 ? C TRS 1 A 1 HETATM 2 C C1 TRS . . . E 4 9.239 -26.046 76.56 1 53.29 ? C1 TRS 1 A 1 HETATM 3 C C2 TRS . . . E 4 10.722 -27.885 77.539 1 53.46 ? C2 TRS 1 A 1 HETATM 4 C C3 TRS . . . E 4 8.497 -28.335 76.398 1 53.72 ? C3 TRS 1 A 1 HETATM 5 N N TRS . . . E 4 8.638 -27.285 78.6 1 53.22 ? N TRS 1 A 1 HETATM 6 O O1 TRS . . . E 4 9.844 -25.089 77.385 1 54.61 ? O1 TRS 1 A 1 HETATM 7 O O2 TRS . . . E 4 11.626 -27.482 76.523 1 52.78 ? O2 TRS 1 A 1 HETATM 8 O O3 TRS . . . E 4 9.378 -29.285 75.848 1 54.43 ? O3 TRS 1 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 341 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 8 #