data_2ZB1 # _model_server_result.job_id -bMTLRU9AKoQhaBVuixEig _model_server_result.datetime_utc '2024-10-20 20:45:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2zb1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":362}' # _entry.id 2ZB1 # _exptl.entry_id 2ZB1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2ZB1 _cell.length_a 45.57 _cell.length_b 86.106 _cell.length_c 124.362 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ZB1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 179 n n C1 C2 GOL sing 180 n n C1 H11 GOL sing 181 n n C1 H12 GOL sing 182 n n O1 HO1 GOL sing 183 n n C2 O2 GOL sing 184 n n C2 C3 GOL sing 185 n n C2 H2 GOL sing 186 n n O2 HO2 GOL sing 187 n n C3 O3 GOL sing 188 n n C3 H31 GOL sing 189 n n C3 H32 GOL sing 190 n n O3 HO3 GOL sing 191 n n # _atom_sites.entry_id 2ZB1 _atom_sites.fract_transf_matrix[1][1] 0.021944 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011614 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008041 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GK4 A 1 361 1 GK4 GK4 . C 3 GOL A 1 362 1 GOL GOL . D 3 GOL A 1 363 2 GOL GOL . E 4 HOH A 1 364 1 HOH HOH . E 4 HOH A 2 365 2 HOH HOH . E 4 HOH A 3 366 3 HOH HOH . E 4 HOH A 4 367 4 HOH HOH . E 4 HOH A 5 368 5 HOH HOH . E 4 HOH A 6 369 6 HOH HOH . E 4 HOH A 7 370 7 HOH HOH . E 4 HOH A 8 371 8 HOH HOH . E 4 HOH A 9 372 9 HOH HOH . E 4 HOH A 10 373 10 HOH HOH . E 4 HOH A 11 374 11 HOH HOH . E 4 HOH A 12 375 12 HOH HOH . E 4 HOH A 13 376 13 HOH HOH . E 4 HOH A 14 377 14 HOH HOH . E 4 HOH A 15 378 15 HOH HOH . E 4 HOH A 16 379 16 HOH HOH . E 4 HOH A 17 380 17 HOH HOH . E 4 HOH A 18 381 18 HOH HOH . E 4 HOH A 19 382 19 HOH HOH . E 4 HOH A 20 383 20 HOH HOH . E 4 HOH A 21 384 21 HOH HOH . E 4 HOH A 22 385 22 HOH HOH . E 4 HOH A 23 386 23 HOH HOH . E 4 HOH A 24 387 24 HOH HOH . E 4 HOH A 25 388 25 HOH HOH . E 4 HOH A 26 389 26 HOH HOH . E 4 HOH A 27 390 27 HOH HOH . E 4 HOH A 28 391 28 HOH HOH . E 4 HOH A 29 392 29 HOH HOH . E 4 HOH A 30 393 30 HOH HOH . E 4 HOH A 31 394 31 HOH HOH . E 4 HOH A 32 395 32 HOH HOH . E 4 HOH A 33 396 33 HOH HOH . E 4 HOH A 34 397 34 HOH HOH . E 4 HOH A 35 398 35 HOH HOH . E 4 HOH A 36 399 36 HOH HOH . E 4 HOH A 37 400 37 HOH HOH . E 4 HOH A 38 401 38 HOH HOH . E 4 HOH A 39 402 39 HOH HOH . E 4 HOH A 40 403 40 HOH HOH . E 4 HOH A 41 404 41 HOH HOH . E 4 HOH A 42 405 42 HOH HOH . E 4 HOH A 43 406 43 HOH HOH . E 4 HOH A 44 407 44 HOH HOH . E 4 HOH A 45 408 45 HOH HOH . E 4 HOH A 46 409 46 HOH HOH . E 4 HOH A 47 410 47 HOH HOH . E 4 HOH A 48 411 48 HOH HOH . E 4 HOH A 49 412 49 HOH HOH . E 4 HOH A 50 413 50 HOH HOH . E 4 HOH A 51 414 51 HOH HOH . E 4 HOH A 52 415 52 HOH HOH . E 4 HOH A 53 416 53 HOH HOH . E 4 HOH A 54 417 54 HOH HOH . E 4 HOH A 55 418 55 HOH HOH . E 4 HOH A 56 419 56 HOH HOH . E 4 HOH A 57 420 57 HOH HOH . E 4 HOH A 58 421 58 HOH HOH . E 4 HOH A 59 422 59 HOH HOH . E 4 HOH A 60 423 60 HOH HOH . E 4 HOH A 61 424 61 HOH HOH . E 4 HOH A 62 425 62 HOH HOH . E 4 HOH A 63 426 63 HOH HOH . E 4 HOH A 64 427 64 HOH HOH . E 4 HOH A 65 428 65 HOH HOH . E 4 HOH A 66 429 66 HOH HOH . E 4 HOH A 67 430 67 HOH HOH . E 4 HOH A 68 431 68 HOH HOH . E 4 HOH A 69 432 69 HOH HOH . E 4 HOH A 70 433 70 HOH HOH . E 4 HOH A 71 434 71 HOH HOH . E 4 HOH A 72 435 72 HOH HOH . E 4 HOH A 73 436 73 HOH HOH . E 4 HOH A 74 437 74 HOH HOH . E 4 HOH A 75 438 75 HOH HOH . E 4 HOH A 76 439 76 HOH HOH . E 4 HOH A 77 440 77 HOH HOH . E 4 HOH A 78 441 78 HOH HOH . E 4 HOH A 79 442 79 HOH HOH . E 4 HOH A 80 443 80 HOH HOH . E 4 HOH A 81 444 81 HOH HOH . E 4 HOH A 82 445 82 HOH HOH . E 4 HOH A 83 446 83 HOH HOH . E 4 HOH A 84 447 84 HOH HOH . E 4 HOH A 85 448 85 HOH HOH . E 4 HOH A 86 449 86 HOH HOH . E 4 HOH A 87 450 87 HOH HOH . E 4 HOH A 88 451 88 HOH HOH . E 4 HOH A 89 452 89 HOH HOH . E 4 HOH A 90 453 90 HOH HOH . E 4 HOH A 91 454 91 HOH HOH . E 4 HOH A 92 455 92 HOH HOH . E 4 HOH A 93 456 93 HOH HOH . E 4 HOH A 94 457 94 HOH HOH . E 4 HOH A 95 458 95 HOH HOH . E 4 HOH A 96 459 96 HOH HOH . E 4 HOH A 97 460 97 HOH HOH . E 4 HOH A 98 461 98 HOH HOH . E 4 HOH A 99 462 99 HOH HOH . E 4 HOH A 100 463 100 HOH HOH . E 4 HOH A 101 464 101 HOH HOH . E 4 HOH A 102 465 102 HOH HOH . E 4 HOH A 103 466 103 HOH HOH . E 4 HOH A 104 467 104 HOH HOH . E 4 HOH A 105 468 105 HOH HOH . E 4 HOH A 106 469 106 HOH HOH . E 4 HOH A 107 470 107 HOH HOH . E 4 HOH A 108 471 108 HOH HOH . E 4 HOH A 109 472 109 HOH HOH . E 4 HOH A 110 473 110 HOH HOH . E 4 HOH A 111 474 111 HOH HOH . E 4 HOH A 112 475 112 HOH HOH . E 4 HOH A 113 476 113 HOH HOH . E 4 HOH A 114 477 114 HOH HOH . E 4 HOH A 115 478 115 HOH HOH . E 4 HOH A 116 479 116 HOH HOH . E 4 HOH A 117 480 117 HOH HOH . E 4 HOH A 118 481 118 HOH HOH . E 4 HOH A 119 482 119 HOH HOH . E 4 HOH A 120 483 120 HOH HOH . E 4 HOH A 121 484 121 HOH HOH . E 4 HOH A 122 485 122 HOH HOH . E 4 HOH A 123 486 123 HOH HOH . E 4 HOH A 124 487 124 HOH HOH . E 4 HOH A 125 488 125 HOH HOH . E 4 HOH A 126 489 126 HOH HOH . E 4 HOH A 127 490 127 HOH HOH . E 4 HOH A 128 491 128 HOH HOH . E 4 HOH A 129 492 129 HOH HOH . E 4 HOH A 130 493 130 HOH HOH . E 4 HOH A 131 494 131 HOH HOH . E 4 HOH A 132 495 132 HOH HOH . E 4 HOH A 133 496 133 HOH HOH . E 4 HOH A 134 497 134 HOH HOH . E 4 HOH A 135 498 135 HOH HOH . E 4 HOH A 136 499 136 HOH HOH . E 4 HOH A 137 500 137 HOH HOH . E 4 HOH A 138 501 138 HOH HOH . E 4 HOH A 139 502 139 HOH HOH . E 4 HOH A 140 503 140 HOH HOH . E 4 HOH A 141 504 141 HOH HOH . E 4 HOH A 142 505 142 HOH HOH . E 4 HOH A 143 506 143 HOH HOH . E 4 HOH A 144 507 144 HOH HOH . E 4 HOH A 145 508 145 HOH HOH . E 4 HOH A 146 509 146 HOH HOH . E 4 HOH A 147 510 147 HOH HOH . E 4 HOH A 148 511 148 HOH HOH . E 4 HOH A 149 512 149 HOH HOH . E 4 HOH A 150 513 150 HOH HOH . E 4 HOH A 151 514 151 HOH HOH . E 4 HOH A 152 515 152 HOH HOH . E 4 HOH A 153 516 153 HOH HOH . E 4 HOH A 154 517 154 HOH HOH . E 4 HOH A 155 518 155 HOH HOH . E 4 HOH A 156 519 156 HOH HOH . E 4 HOH A 157 520 157 HOH HOH . E 4 HOH A 158 521 158 HOH HOH . E 4 HOH A 159 522 159 HOH HOH . E 4 HOH A 160 523 160 HOH HOH . E 4 HOH A 161 524 161 HOH HOH . E 4 HOH A 162 525 162 HOH HOH . E 4 HOH A 163 526 163 HOH HOH . E 4 HOH A 164 527 164 HOH HOH . E 4 HOH A 165 528 165 HOH HOH . E 4 HOH A 166 529 166 HOH HOH . E 4 HOH A 167 530 167 HOH HOH . E 4 HOH A 168 531 168 HOH HOH . E 4 HOH A 169 532 169 HOH HOH . E 4 HOH A 170 533 170 HOH HOH . E 4 HOH A 171 534 171 HOH HOH . E 4 HOH A 172 535 172 HOH HOH . E 4 HOH A 173 536 173 HOH HOH . E 4 HOH A 174 537 174 HOH HOH . E 4 HOH A 175 538 175 HOH HOH . E 4 HOH A 176 539 176 HOH HOH . E 4 HOH A 177 540 177 HOH HOH . E 4 HOH A 178 541 178 HOH HOH . E 4 HOH A 179 542 179 HOH HOH . E 4 HOH A 180 543 180 HOH HOH . E 4 HOH A 181 544 181 HOH HOH . E 4 HOH A 182 545 182 HOH HOH . E 4 HOH A 183 546 183 HOH HOH . E 4 HOH A 184 547 184 HOH HOH . E 4 HOH A 185 548 185 HOH HOH . E 4 HOH A 186 549 186 HOH HOH . E 4 HOH A 187 550 187 HOH HOH . E 4 HOH A 188 551 188 HOH HOH . E 4 HOH A 189 552 189 HOH HOH . E 4 HOH A 190 553 190 HOH HOH . E 4 HOH A 191 554 191 HOH HOH . E 4 HOH A 192 555 192 HOH HOH . E 4 HOH A 193 556 193 HOH HOH . E 4 HOH A 194 557 194 HOH HOH . E 4 HOH A 195 558 195 HOH HOH . E 4 HOH A 196 559 196 HOH HOH . E 4 HOH A 197 560 197 HOH HOH . E 4 HOH A 198 561 198 HOH HOH . E 4 HOH A 199 562 199 HOH HOH . E 4 HOH A 200 563 200 HOH HOH . E 4 HOH A 201 564 201 HOH HOH . E 4 HOH A 202 565 202 HOH HOH . E 4 HOH A 203 566 203 HOH HOH . E 4 HOH A 204 567 204 HOH HOH . E 4 HOH A 205 568 205 HOH HOH . E 4 HOH A 206 569 206 HOH HOH . E 4 HOH A 207 570 207 HOH HOH . E 4 HOH A 208 571 208 HOH HOH . E 4 HOH A 209 572 209 HOH HOH . E 4 HOH A 210 573 210 HOH HOH . E 4 HOH A 211 574 211 HOH HOH . E 4 HOH A 212 575 212 HOH HOH . E 4 HOH A 213 576 213 HOH HOH . E 4 HOH A 214 577 214 HOH HOH . E 4 HOH A 215 578 215 HOH HOH . E 4 HOH A 216 579 216 HOH HOH . E 4 HOH A 217 580 217 HOH HOH . E 4 HOH A 218 581 218 HOH HOH . E 4 HOH A 219 582 219 HOH HOH . E 4 HOH A 220 583 220 HOH HOH . E 4 HOH A 221 584 221 HOH HOH . E 4 HOH A 222 585 222 HOH HOH . E 4 HOH A 223 586 223 HOH HOH . E 4 HOH A 224 587 224 HOH HOH . E 4 HOH A 225 588 225 HOH HOH . E 4 HOH A 226 589 226 HOH HOH . E 4 HOH A 227 590 227 HOH HOH . E 4 HOH A 228 591 228 HOH HOH . E 4 HOH A 229 592 229 HOH HOH . E 4 HOH A 230 593 230 HOH HOH . E 4 HOH A 231 594 231 HOH HOH . E 4 HOH A 232 595 232 HOH HOH . E 4 HOH A 233 596 233 HOH HOH . E 4 HOH A 234 597 234 HOH HOH . E 4 HOH A 235 598 235 HOH HOH . E 4 HOH A 236 599 236 HOH HOH . E 4 HOH A 237 600 237 HOH HOH . E 4 HOH A 238 601 238 HOH HOH . E 4 HOH A 239 602 239 HOH HOH . E 4 HOH A 240 603 240 HOH HOH . E 4 HOH A 241 604 241 HOH HOH . E 4 HOH A 242 605 242 HOH HOH . E 4 HOH A 243 606 243 HOH HOH . E 4 HOH A 244 607 244 HOH HOH . E 4 HOH A 245 608 245 HOH HOH . E 4 HOH A 246 609 246 HOH HOH . E 4 HOH A 247 610 247 HOH HOH . E 4 HOH A 248 611 248 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 21.01 22.192 39.066 1 46.16 ? C1 GOL 362 A 1 HETATM 2 O O1 GOL . . . C 3 21.889 21.093 39.017 1 48.77 ? O1 GOL 362 A 1 HETATM 3 C C2 GOL . . . C 3 20.066 21.974 40.232 1 48.3 ? C2 GOL 362 A 1 HETATM 4 O O2 GOL . . . C 3 20.834 21.6 41.358 1 42.36 ? O2 GOL 362 A 1 HETATM 5 C C3 GOL . . . C 3 19.257 23.243 40.549 1 53.69 ? C3 GOL 362 A 1 HETATM 6 O O3 GOL . . . C 3 19.277 24.254 39.545 1 57.93 ? O3 GOL 362 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #