data_2ZCQ # _model_server_result.job_id X6G34Y93N3P3bgRzyZpHBA _model_server_result.datetime_utc '2024-11-02 11:30:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2zcq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":451}' # _entry.id 2ZCQ # _exptl.entry_id 2ZCQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 386.357 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(1R)-4-(3-phenoxyphenyl)-1-phosphonobutane-1-sulfonic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2ZCQ _cell.length_a 80.44 _cell.length_b 80.44 _cell.length_c 90.04 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ZCQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 54 A ASP 48 1_555 C MG MG . A MG 452 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.471 ? metalc ? metalc2 A OD1 ASN 174 A ASN 168 1_555 D MG MG . A MG 453 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc3 A OD2 ASP 178 A ASP 172 1_555 D MG MG . A MG 453 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? metalc ? metalc4 B OAC B65 . A B65 451 1_555 C MG MG . A MG 452 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? metalc ? metalc5 B OAB B65 . A B65 451 1_555 D MG MG . A MG 453 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? metalc ? metalc6 B OAF B65 . A B65 451 1_555 D MG MG . A MG 453 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? # _chem_comp.formula 'C16 H19 O7 P S' _chem_comp.formula_weight 386.357 _chem_comp.id B65 _chem_comp.mon_nstd_flag . _chem_comp.name '(1R)-4-(3-phenoxyphenyl)-1-phosphonobutane-1-sulfonic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms BPH-652 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAL CAH B65 doub 70 n y CAL CAU B65 sing 71 n y CAH CAG B65 sing 72 n y CAG CAI B65 doub 73 n y CAI CAM B65 sing 74 n y CAM CAU B65 doub 75 n y CAU OAS B65 sing 76 n n OAS CAV B65 sing 77 n n CAV CAO B65 doub 78 n y CAV CAN B65 sing 79 n y CAO CAT B65 sing 80 n y CAN CAJ B65 doub 81 n y CAJ CAK B65 sing 82 n y CAK CAT B65 doub 83 n y CAT CAQ B65 sing 84 n n CAQ CAP B65 sing 85 n n CAP CAR B65 sing 86 n n CAR CAW B65 sing 87 n n CAW PAX B65 sing 88 n n CAW SAY B65 sing 89 n n PAX OAB B65 sing 90 n n PAX OAC B65 sing 91 n n PAX OAA B65 doub 92 n n SAY OAF B65 doub 93 n n SAY OAE B65 doub 94 n n SAY OAD B65 sing 95 n n CAL HAL B65 sing 96 n n CAH HAH B65 sing 97 n n CAG HAG B65 sing 98 n n CAI HAI B65 sing 99 n n CAM HAM B65 sing 100 n n CAO HAO B65 sing 101 n n CAN HAN B65 sing 102 n n CAJ HAJ B65 sing 103 n n CAK HAK B65 sing 104 n n CAQ HAQ B65 sing 105 n n CAQ HAQA B65 sing 106 n n CAP HAP B65 sing 107 n n CAP HAPA B65 sing 108 n n CAR HAR B65 sing 109 n n CAR HARA B65 sing 110 n n CAW HAW B65 sing 111 n n OAB HAB B65 sing 112 n n OAC HAC B65 sing 113 n n OAD HAD B65 sing 114 n n # _atom_sites.entry_id 2ZCQ _atom_sites.fract_transf_matrix[1][1] 0.012432 _atom_sites.fract_transf_matrix[1][2] 0.007177 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014355 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011106 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 B65 A 1 451 451 B65 B65 . C 3 MG A 1 452 452 MG MG . D 3 MG A 1 453 453 MG MG . E 4 HOH A 1 301 301 HOH HOH . E 4 HOH A 2 302 302 HOH HOH . E 4 HOH A 3 303 303 HOH HOH . E 4 HOH A 4 304 304 HOH HOH . E 4 HOH A 5 305 305 HOH HOH . E 4 HOH A 6 306 306 HOH HOH . E 4 HOH A 7 307 307 HOH HOH . E 4 HOH A 8 308 308 HOH HOH . E 4 HOH A 9 309 309 HOH HOH . E 4 HOH A 10 310 310 HOH HOH . E 4 HOH A 11 311 311 HOH HOH . E 4 HOH A 12 312 312 HOH HOH . E 4 HOH A 13 313 313 HOH HOH . E 4 HOH A 14 314 314 HOH HOH . E 4 HOH A 15 315 315 HOH HOH . E 4 HOH A 16 316 316 HOH HOH . E 4 HOH A 17 317 317 HOH HOH . E 4 HOH A 18 318 318 HOH HOH . E 4 HOH A 19 319 319 HOH HOH . E 4 HOH A 20 320 320 HOH HOH . E 4 HOH A 21 321 321 HOH HOH . E 4 HOH A 22 322 322 HOH HOH . E 4 HOH A 23 323 323 HOH HOH . E 4 HOH A 24 324 324 HOH HOH . E 4 HOH A 25 325 325 HOH HOH . E 4 HOH A 26 326 326 HOH HOH . E 4 HOH A 27 327 327 HOH HOH . E 4 HOH A 28 328 328 HOH HOH . E 4 HOH A 29 329 329 HOH HOH . E 4 HOH A 30 330 330 HOH HOH . E 4 HOH A 31 331 331 HOH HOH . E 4 HOH A 32 332 332 HOH HOH . E 4 HOH A 33 333 333 HOH HOH . E 4 HOH A 34 334 334 HOH HOH . E 4 HOH A 35 335 335 HOH HOH . E 4 HOH A 36 336 336 HOH HOH . E 4 HOH A 37 337 337 HOH HOH . E 4 HOH A 38 338 338 HOH HOH . E 4 HOH A 39 339 339 HOH HOH . E 4 HOH A 40 340 340 HOH HOH . E 4 HOH A 41 341 341 HOH HOH . E 4 HOH A 42 342 342 HOH HOH . E 4 HOH A 43 343 343 HOH HOH . E 4 HOH A 44 344 344 HOH HOH . E 4 HOH A 45 345 345 HOH HOH . E 4 HOH A 46 346 346 HOH HOH . E 4 HOH A 47 347 347 HOH HOH . E 4 HOH A 48 348 348 HOH HOH . E 4 HOH A 49 349 349 HOH HOH . E 4 HOH A 50 350 350 HOH HOH . E 4 HOH A 51 351 351 HOH HOH . E 4 HOH A 52 352 352 HOH HOH . E 4 HOH A 53 353 353 HOH HOH . E 4 HOH A 54 354 354 HOH HOH . E 4 HOH A 55 355 355 HOH HOH . E 4 HOH A 56 356 356 HOH HOH . E 4 HOH A 57 357 357 HOH HOH . E 4 HOH A 58 358 358 HOH HOH . E 4 HOH A 59 359 359 HOH HOH . E 4 HOH A 60 360 360 HOH HOH . E 4 HOH A 61 361 361 HOH HOH . E 4 HOH A 62 362 362 HOH HOH . E 4 HOH A 63 363 363 HOH HOH . E 4 HOH A 64 364 364 HOH HOH . E 4 HOH A 65 365 365 HOH HOH . E 4 HOH A 66 366 366 HOH HOH . E 4 HOH A 67 367 367 HOH HOH . E 4 HOH A 68 368 368 HOH HOH . E 4 HOH A 69 369 369 HOH HOH . E 4 HOH A 70 370 370 HOH HOH . E 4 HOH A 71 371 371 HOH HOH . E 4 HOH A 72 372 372 HOH HOH . E 4 HOH A 73 373 373 HOH HOH . E 4 HOH A 74 374 374 HOH HOH . E 4 HOH A 75 375 375 HOH HOH . E 4 HOH A 76 376 376 HOH HOH . E 4 HOH A 77 377 377 HOH HOH . E 4 HOH A 78 378 378 HOH HOH . E 4 HOH A 79 379 379 HOH HOH . E 4 HOH A 80 380 380 HOH HOH . E 4 HOH A 81 381 381 HOH HOH . E 4 HOH A 82 382 382 HOH HOH . E 4 HOH A 83 383 383 HOH HOH . E 4 HOH A 84 384 384 HOH HOH . E 4 HOH A 85 385 385 HOH HOH . E 4 HOH A 86 386 386 HOH HOH . E 4 HOH A 87 387 387 HOH HOH . E 4 HOH A 88 388 388 HOH HOH . E 4 HOH A 89 389 389 HOH HOH . E 4 HOH A 90 390 390 HOH HOH . E 4 HOH A 91 391 391 HOH HOH . E 4 HOH A 92 392 392 HOH HOH . E 4 HOH A 93 393 393 HOH HOH . E 4 HOH A 94 394 394 HOH HOH . E 4 HOH A 95 395 395 HOH HOH . E 4 HOH A 96 396 396 HOH HOH . E 4 HOH A 97 397 397 HOH HOH . E 4 HOH A 98 398 398 HOH HOH . E 4 HOH A 99 399 399 HOH HOH . E 4 HOH A 100 400 400 HOH HOH . E 4 HOH A 101 401 401 HOH HOH . E 4 HOH A 102 402 402 HOH HOH . E 4 HOH A 103 403 403 HOH HOH . E 4 HOH A 104 404 404 HOH HOH . E 4 HOH A 105 405 405 HOH HOH . E 4 HOH A 106 406 406 HOH HOH . E 4 HOH A 107 407 407 HOH HOH . E 4 HOH A 108 408 408 HOH HOH . E 4 HOH A 109 409 409 HOH HOH . E 4 HOH A 110 410 410 HOH HOH . E 4 HOH A 111 411 411 HOH HOH . E 4 HOH A 112 412 412 HOH HOH . E 4 HOH A 113 413 413 HOH HOH . E 4 HOH A 114 414 414 HOH HOH . E 4 HOH A 115 415 415 HOH HOH . E 4 HOH A 116 416 416 HOH HOH . E 4 HOH A 117 417 417 HOH HOH . E 4 HOH A 118 418 418 HOH HOH . E 4 HOH A 119 419 419 HOH HOH . E 4 HOH A 120 420 420 HOH HOH . E 4 HOH A 121 421 421 HOH HOH . E 4 HOH A 122 422 422 HOH HOH . E 4 HOH A 123 423 423 HOH HOH . E 4 HOH A 124 424 424 HOH HOH . E 4 HOH A 125 425 425 HOH HOH . E 4 HOH A 126 426 426 HOH HOH . E 4 HOH A 127 427 427 HOH HOH . E 4 HOH A 128 428 428 HOH HOH . E 4 HOH A 129 429 429 HOH HOH . E 4 HOH A 130 430 430 HOH HOH . E 4 HOH A 131 431 431 HOH HOH . E 4 HOH A 132 432 432 HOH HOH . E 4 HOH A 133 433 433 HOH HOH . E 4 HOH A 134 434 434 HOH HOH . E 4 HOH A 135 435 435 HOH HOH . E 4 HOH A 136 436 436 HOH HOH . E 4 HOH A 137 437 437 HOH HOH . E 4 HOH A 138 438 438 HOH HOH . E 4 HOH A 139 439 439 HOH HOH . E 4 HOH A 140 440 440 HOH HOH . E 4 HOH A 141 441 441 HOH HOH . E 4 HOH A 142 442 442 HOH HOH . E 4 HOH A 143 443 443 HOH HOH . E 4 HOH A 144 444 444 HOH HOH . E 4 HOH A 145 445 445 HOH HOH . E 4 HOH A 146 446 446 HOH HOH . E 4 HOH A 147 447 447 HOH HOH . E 4 HOH A 148 448 448 HOH HOH . E 4 HOH A 149 449 449 HOH HOH . E 4 HOH A 150 450 450 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAL B65 . . . B 2 15.065 55.496 39.851 1 60.78 ? CAL B65 451 A 1 HETATM 2 C CAH B65 . . . B 2 14.805 56.445 40.843 1 61.99 ? CAH B65 451 A 1 HETATM 3 C CAG B65 . . . B 2 13.936 56.149 41.887 1 59.43 ? CAG B65 451 A 1 HETATM 4 C CAI B65 . . . B 2 13.324 54.906 41.949 1 60.03 ? CAI B65 451 A 1 HETATM 5 C CAM B65 . . . B 2 13.584 53.956 40.962 1 60.64 ? CAM B65 451 A 1 HETATM 6 C CAU B65 . . . B 2 14.448 54.258 39.915 1 61.02 ? CAU B65 451 A 1 HETATM 7 O OAS B65 . . . B 2 14.55 53.387 38.87 1 60.74 ? OAS B65 451 A 1 HETATM 8 C CAV B65 . . . B 2 15.613 52.542 38.892 1 60.04 ? CAV B65 451 A 1 HETATM 9 C CAO B65 . . . B 2 15.999 51.969 37.682 1 60.93 ? CAO B65 451 A 1 HETATM 10 C CAN B65 . . . B 2 16.233 52.144 40.07 1 60.36 ? CAN B65 451 A 1 HETATM 11 C CAJ B65 . . . B 2 17.226 51.173 40.03 1 61.32 ? CAJ B65 451 A 1 HETATM 12 C CAK B65 . . . B 2 17.602 50.594 38.82 1 60.78 ? CAK B65 451 A 1 HETATM 13 C CAT B65 . . . B 2 16.983 50.995 37.641 1 61.09 ? CAT B65 451 A 1 HETATM 14 C CAQ B65 . . . B 2 17.331 50.343 36.298 1 61.01 ? CAQ B65 451 A 1 HETATM 15 C CAP B65 . . . B 2 18.445 51.101 35.572 1 57.41 ? CAP B65 451 A 1 HETATM 16 C CAR B65 . . . B 2 19.7 51.116 36.444 1 62.16 ? CAR B65 451 A 1 HETATM 17 C CAW B65 . . . B 2 20.921 51.682 35.713 1 63.36 ? CAW B65 451 A 1 HETATM 18 P PAX B65 . . . B 2 21.318 50.687 34.219 1 64.58 ? PAX B65 451 A 1 HETATM 19 O OAB B65 . . . B 2 22.821 51.064 33.784 1 64.62 ? OAB B65 451 A 1 HETATM 20 O OAC B65 . . . B 2 21.342 49.151 34.706 1 64.21 ? OAC B65 451 A 1 HETATM 21 O OAA B65 . . . B 2 20.35 50.909 33.119 1 64.54 ? OAA B65 451 A 1 HETATM 22 S SAY B65 . . . B 2 22.351 51.706 36.853 1 62.14 ? SAY B65 451 A 1 HETATM 23 O OAF B65 . . . B 2 23.526 52.092 36.133 1 62.79 ? OAF B65 451 A 1 HETATM 24 O OAE B65 . . . B 2 22.558 50.341 37.435 1 64.98 ? OAE B65 451 A 1 HETATM 25 O OAD B65 . . . B 2 22.082 52.671 37.974 1 61.59 ? OAD B65 451 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 332 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 25 #