data_2ZCZ # _model_server_result.job_id Z4d-D400Fu2ItFYNQVbOLg _model_server_result.datetime_utc '2025-03-06 10:01:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2zcz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":100}' # _entry.id 2ZCZ # _exptl.entry_id 2ZCZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 204.225 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TRYPTOPHAN _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2ZCZ _cell.length_a 110.137 _cell.length_b 110.137 _cell.length_c 36.976 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ZCZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 75 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 4' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dodecameric 12 author_and_software_defined_assembly 1 PISA dodecameric 12 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,G,H,I,M,N,O 1 1,2,3,4 D,E,F,J,K,L,P,Q,R 2 1,5,6,7 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -y,x,z 0 -1 0 1 0 0 0 0 1 0 0 0 4 'crystal symmetry operation' 4_555 y,-x,z 0 1 0 -1 0 0 0 0 1 0 0 0 5 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 110.137 110.137 0 6 'crystal symmetry operation' 3_655 -y+1,x,z 0 -1 0 1 0 0 0 0 1 110.137 0 0 7 'crystal symmetry operation' 4_565 y,-x+1,z 0 1 0 -1 0 0 0 0 1 0 110.137 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # _chem_comp.formula 'C11 H12 N2 O2' _chem_comp.formula_weight 204.225 _chem_comp.id TRP _chem_comp.mon_nstd_flag y _chem_comp.name TRYPTOPHAN _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA TRP sing 276 n n N H TRP sing 277 n n N H2 TRP sing 278 n n CA C TRP sing 279 n n CA CB TRP sing 280 n n CA HA TRP sing 281 n n C O TRP doub 282 n n C OXT TRP sing 283 n n CB CG TRP sing 284 n n CB HB2 TRP sing 285 n n CB HB3 TRP sing 286 n n CG CD1 TRP doub 287 n y CG CD2 TRP sing 288 n y CD1 NE1 TRP sing 289 n y CD1 HD1 TRP sing 290 n n CD2 CE2 TRP doub 291 n y CD2 CE3 TRP sing 292 n y NE1 CE2 TRP sing 293 n y NE1 HE1 TRP sing 294 n n CE2 CZ2 TRP sing 295 n y CE3 CZ3 TRP doub 296 n y CE3 HE3 TRP sing 297 n n CZ2 CH2 TRP doub 298 n y CZ2 HZ2 TRP sing 299 n n CZ3 CH2 TRP sing 300 n y CZ3 HZ3 TRP sing 301 n n CH2 HH2 TRP sing 302 n n OXT HXT TRP sing 303 n n # _atom_sites.entry_id 2ZCZ _atom_sites.fract_transf_matrix[1][1] 0.00908 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00908 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.027045 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 TRP A 1 100 100 TRP TRP . H 2 TRP B 1 100 100 TRP TRP . I 2 TRP C 1 100 100 TRP TRP . J 2 TRP D 1 100 100 TRP TRP . K 2 TRP E 1 100 100 TRP TRP . L 2 TRP F 1 100 100 TRP TRP . M 3 HOH A 1 101 5 HOH HOH . M 3 HOH A 2 102 9 HOH HOH . M 3 HOH A 3 103 13 HOH HOH . M 3 HOH A 4 104 18 HOH HOH . M 3 HOH A 5 105 21 HOH HOH . M 3 HOH A 6 106 25 HOH HOH . M 3 HOH A 7 107 26 HOH HOH . M 3 HOH A 8 108 34 HOH HOH . M 3 HOH A 9 109 35 HOH HOH . M 3 HOH A 10 110 39 HOH HOH . M 3 HOH A 11 111 40 HOH HOH . M 3 HOH A 12 112 43 HOH HOH . M 3 HOH A 13 113 46 HOH HOH . M 3 HOH A 14 114 58 HOH HOH . M 3 HOH A 15 115 59 HOH HOH . M 3 HOH A 16 116 61 HOH HOH . M 3 HOH A 17 117 67 HOH HOH . M 3 HOH A 18 118 78 HOH HOH . M 3 HOH A 19 119 79 HOH HOH . M 3 HOH A 20 120 83 HOH HOH . M 3 HOH A 21 121 86 HOH HOH . M 3 HOH A 22 122 99 HOH HOH . M 3 HOH A 23 123 100 HOH HOH . M 3 HOH A 24 124 102 HOH HOH . M 3 HOH A 25 125 111 HOH HOH . M 3 HOH A 26 126 114 HOH HOH . M 3 HOH A 27 127 126 HOH HOH . M 3 HOH A 28 128 132 HOH HOH . M 3 HOH A 29 129 160 HOH HOH . M 3 HOH A 30 130 164 HOH HOH . M 3 HOH A 31 131 166 HOH HOH . M 3 HOH A 32 132 176 HOH HOH . M 3 HOH A 33 133 194 HOH HOH . M 3 HOH A 34 134 199 HOH HOH . N 3 HOH B 1 101 3 HOH HOH . N 3 HOH B 2 102 4 HOH HOH . N 3 HOH B 3 103 8 HOH HOH . N 3 HOH B 4 104 10 HOH HOH . N 3 HOH B 5 105 12 HOH HOH . N 3 HOH B 6 106 42 HOH HOH . N 3 HOH B 7 107 54 HOH HOH . N 3 HOH B 8 108 57 HOH HOH . N 3 HOH B 9 109 71 HOH HOH . N 3 HOH B 10 110 74 HOH HOH . N 3 HOH B 11 111 77 HOH HOH . N 3 HOH B 12 112 91 HOH HOH . N 3 HOH B 13 113 92 HOH HOH . N 3 HOH B 14 114 101 HOH HOH . N 3 HOH B 15 115 109 HOH HOH . N 3 HOH B 16 116 112 HOH HOH . N 3 HOH B 17 117 116 HOH HOH . N 3 HOH B 18 118 118 HOH HOH . N 3 HOH B 19 119 124 HOH HOH . N 3 HOH B 20 120 129 HOH HOH . N 3 HOH B 21 121 137 HOH HOH . N 3 HOH B 22 122 139 HOH HOH . N 3 HOH B 23 123 144 HOH HOH . N 3 HOH B 24 124 151 HOH HOH . N 3 HOH B 25 125 153 HOH HOH . N 3 HOH B 26 126 165 HOH HOH . N 3 HOH B 27 127 170 HOH HOH . N 3 HOH B 28 128 171 HOH HOH . N 3 HOH B 29 129 174 HOH HOH . N 3 HOH B 30 130 180 HOH HOH . N 3 HOH B 31 131 182 HOH HOH . N 3 HOH B 32 132 184 HOH HOH . N 3 HOH B 33 133 189 HOH HOH . O 3 HOH C 1 101 1 HOH HOH . O 3 HOH C 2 102 2 HOH HOH . O 3 HOH C 3 103 6 HOH HOH . O 3 HOH C 4 104 7 HOH HOH . O 3 HOH C 5 105 19 HOH HOH . O 3 HOH C 6 106 20 HOH HOH . O 3 HOH C 7 107 22 HOH HOH . O 3 HOH C 8 108 29 HOH HOH . O 3 HOH C 9 109 38 HOH HOH . O 3 HOH C 10 110 60 HOH HOH . O 3 HOH C 11 111 66 HOH HOH . O 3 HOH C 12 112 72 HOH HOH . O 3 HOH C 13 113 84 HOH HOH . O 3 HOH C 14 114 93 HOH HOH . O 3 HOH C 15 115 97 HOH HOH . O 3 HOH C 16 116 106 HOH HOH . O 3 HOH C 17 117 107 HOH HOH . O 3 HOH C 18 118 113 HOH HOH . O 3 HOH C 19 119 120 HOH HOH . O 3 HOH C 20 120 127 HOH HOH . O 3 HOH C 21 121 128 HOH HOH . O 3 HOH C 22 122 130 HOH HOH . O 3 HOH C 23 123 136 HOH HOH . O 3 HOH C 24 124 145 HOH HOH . O 3 HOH C 25 125 148 HOH HOH . O 3 HOH C 26 126 150 HOH HOH . O 3 HOH C 27 127 152 HOH HOH . O 3 HOH C 28 128 154 HOH HOH . O 3 HOH C 29 129 159 HOH HOH . O 3 HOH C 30 130 167 HOH HOH . O 3 HOH C 31 131 168 HOH HOH . O 3 HOH C 32 132 169 HOH HOH . O 3 HOH C 33 133 177 HOH HOH . O 3 HOH C 34 134 190 HOH HOH . P 3 HOH D 1 101 16 HOH HOH . P 3 HOH D 2 102 28 HOH HOH . P 3 HOH D 3 103 30 HOH HOH . P 3 HOH D 4 104 37 HOH HOH . P 3 HOH D 5 105 44 HOH HOH . P 3 HOH D 6 106 50 HOH HOH . P 3 HOH D 7 107 52 HOH HOH . P 3 HOH D 8 108 53 HOH HOH . P 3 HOH D 9 109 55 HOH HOH . P 3 HOH D 10 110 63 HOH HOH . P 3 HOH D 11 111 64 HOH HOH . P 3 HOH D 12 112 69 HOH HOH . P 3 HOH D 13 113 73 HOH HOH . P 3 HOH D 14 114 81 HOH HOH . P 3 HOH D 15 115 90 HOH HOH . P 3 HOH D 16 116 96 HOH HOH . P 3 HOH D 17 117 98 HOH HOH . P 3 HOH D 18 118 103 HOH HOH . P 3 HOH D 19 119 104 HOH HOH . P 3 HOH D 20 120 105 HOH HOH . P 3 HOH D 21 121 110 HOH HOH . P 3 HOH D 22 122 119 HOH HOH . P 3 HOH D 23 123 134 HOH HOH . P 3 HOH D 24 124 140 HOH HOH . P 3 HOH D 25 125 147 HOH HOH . P 3 HOH D 26 126 179 HOH HOH . P 3 HOH D 27 127 181 HOH HOH . P 3 HOH D 28 128 191 HOH HOH . P 3 HOH D 29 129 192 HOH HOH . Q 3 HOH E 1 101 17 HOH HOH . Q 3 HOH E 2 102 23 HOH HOH . Q 3 HOH E 3 103 32 HOH HOH . Q 3 HOH E 4 104 33 HOH HOH . Q 3 HOH E 5 105 41 HOH HOH . Q 3 HOH E 6 106 45 HOH HOH . Q 3 HOH E 7 107 47 HOH HOH . Q 3 HOH E 8 108 48 HOH HOH . Q 3 HOH E 9 109 65 HOH HOH . Q 3 HOH E 10 110 68 HOH HOH . Q 3 HOH E 11 111 75 HOH HOH . Q 3 HOH E 12 112 76 HOH HOH . Q 3 HOH E 13 113 89 HOH HOH . Q 3 HOH E 14 114 122 HOH HOH . Q 3 HOH E 15 115 125 HOH HOH . Q 3 HOH E 16 116 133 HOH HOH . Q 3 HOH E 17 117 142 HOH HOH . Q 3 HOH E 18 118 143 HOH HOH . Q 3 HOH E 19 119 155 HOH HOH . Q 3 HOH E 20 120 156 HOH HOH . Q 3 HOH E 21 121 157 HOH HOH . Q 3 HOH E 22 122 158 HOH HOH . Q 3 HOH E 23 123 161 HOH HOH . Q 3 HOH E 24 124 163 HOH HOH . Q 3 HOH E 25 125 173 HOH HOH . Q 3 HOH E 26 126 175 HOH HOH . Q 3 HOH E 27 127 178 HOH HOH . Q 3 HOH E 28 128 185 HOH HOH . Q 3 HOH E 29 129 186 HOH HOH . Q 3 HOH E 30 130 193 HOH HOH . Q 3 HOH E 31 131 195 HOH HOH . Q 3 HOH E 32 132 201 HOH HOH . R 3 HOH F 1 101 11 HOH HOH . R 3 HOH F 2 102 14 HOH HOH . R 3 HOH F 3 103 15 HOH HOH . R 3 HOH F 4 104 24 HOH HOH . R 3 HOH F 5 105 27 HOH HOH . R 3 HOH F 6 106 31 HOH HOH . R 3 HOH F 7 107 36 HOH HOH . R 3 HOH F 8 108 49 HOH HOH . R 3 HOH F 9 109 51 HOH HOH . R 3 HOH F 10 110 56 HOH HOH . R 3 HOH F 11 111 62 HOH HOH . R 3 HOH F 12 112 70 HOH HOH . R 3 HOH F 13 113 80 HOH HOH . R 3 HOH F 14 114 82 HOH HOH . R 3 HOH F 15 115 85 HOH HOH . R 3 HOH F 16 116 87 HOH HOH . R 3 HOH F 17 117 88 HOH HOH . R 3 HOH F 18 119 94 HOH HOH . R 3 HOH F 19 120 95 HOH HOH . R 3 HOH F 20 121 108 HOH HOH . R 3 HOH F 21 122 115 HOH HOH . R 3 HOH F 22 123 117 HOH HOH . R 3 HOH F 23 124 121 HOH HOH . R 3 HOH F 24 125 123 HOH HOH . R 3 HOH F 25 126 131 HOH HOH . R 3 HOH F 26 127 135 HOH HOH . R 3 HOH F 27 128 138 HOH HOH . R 3 HOH F 28 129 141 HOH HOH . R 3 HOH F 29 130 146 HOH HOH . R 3 HOH F 30 131 149 HOH HOH . R 3 HOH F 31 132 162 HOH HOH . R 3 HOH F 32 133 172 HOH HOH . R 3 HOH F 33 134 183 HOH HOH . R 3 HOH F 34 135 187 HOH HOH . R 3 HOH F 35 136 188 HOH HOH . R 3 HOH F 36 137 196 HOH HOH . R 3 HOH F 37 138 197 HOH HOH . R 3 HOH F 38 139 198 HOH HOH . R 3 HOH F 39 140 200 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N TRP . . . L 2 26.35 57.977 14.9 1 9.43 ? N TRP 100 F 1 HETATM 2 C CA TRP . . . L 2 27.092 58.688 15.988 1 10.42 ? CA TRP 100 F 1 HETATM 3 C C TRP . . . L 2 28.555 58.886 15.622 1 9.87 ? C TRP 100 F 1 HETATM 4 O O TRP . . . L 2 29.172 57.941 15.103 1 9.83 ? O TRP 100 F 1 HETATM 5 C CB TRP . . . L 2 26.97 57.905 17.302 1 9.91 ? CB TRP 100 F 1 HETATM 6 C CG TRP . . . L 2 27.605 58.618 18.46 1 9.51 ? CG TRP 100 F 1 HETATM 7 C CD1 TRP . . . L 2 28.866 58.442 18.935 1 8.15 ? CD1 TRP 100 F 1 HETATM 8 C CD2 TRP . . . L 2 26.993 59.636 19.277 1 8.91 ? CD2 TRP 100 F 1 HETATM 9 N NE1 TRP . . . L 2 29.082 59.283 20.019 1 9.89 ? NE1 TRP 100 F 1 HETATM 10 C CE2 TRP . . . L 2 27.959 60.043 20.228 1 7.92 ? CE2 TRP 100 F 1 HETATM 11 C CE3 TRP . . . L 2 25.73 60.27 19.266 1 7.59 ? CE3 TRP 100 F 1 HETATM 12 C CZ2 TRP . . . L 2 27.697 61.02 21.204 1 9.24 ? CZ2 TRP 100 F 1 HETATM 13 C CZ3 TRP . . . L 2 25.467 61.273 20.213 1 8.71 ? CZ3 TRP 100 F 1 HETATM 14 C CH2 TRP . . . L 2 26.462 61.643 21.174 1 9.71 ? CH2 TRP 100 F 1 HETATM 15 O OXT TRP . . . L 2 29.174 59.94 15.848 1 10.28 ? OXT TRP 100 F 1 # _model_server_stats.io_time_ms 32 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 15 #