data_2ZDX # _model_server_result.job_id XonZyliblwUDbpMFMO_J1g _model_server_result.datetime_utc '2024-12-02 12:23:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2zdx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1500}' # _entry.id 2ZDX # _exptl.entry_id 2ZDX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 296.321 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[4-(4-methoxyphenyl)-5-methyl-1H-pyrazol-3-yl]benzene-1,3-diol _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.7 _cell.angle_gamma 90 _cell.entry_id 2ZDX _cell.length_a 68.083 _cell.length_b 69.081 _cell.length_c 85.627 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ZDX _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C17 H16 N2 O3' _chem_comp.formula_weight 296.321 _chem_comp.id P4A _chem_comp.mon_nstd_flag . _chem_comp.name 4-[4-(4-methoxyphenyl)-5-methyl-1H-pyrazol-3-yl]benzene-1,3-diol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 3-(2,4-dihydroxyphenyl)-4-(4-methoxyphenyl)-5-methyl-1h-pyrazole # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 N2 P4A sing 237 n y N1 C5 P4A sing 238 n y N2 C3 P4A doub 239 n y C3 C4 P4A sing 240 n y C3 C6 P4A sing 241 n y C4 C5 P4A doub 242 n y C4 C7 P4A sing 243 n y C5 C8 P4A sing 244 n n C6 C21 P4A doub 245 n y C6 C25 P4A sing 246 n y C7 C12 P4A doub 247 n y C7 C16 P4A sing 248 n y C12 C13 P4A sing 249 n y C13 C14 P4A doub 250 n y C14 C15 P4A sing 251 n y C14 O33 P4A sing 252 n n C15 C16 P4A doub 253 n y C21 C22 P4A sing 254 n y C21 O30 P4A sing 255 n n C22 C23 P4A doub 256 n y C23 C24 P4A sing 257 n y C23 O29 P4A sing 258 n n C24 C25 P4A doub 259 n y O33 C34 P4A sing 260 n n N1 HN1 P4A sing 261 n n C8 H8 P4A sing 262 n n C8 H8A P4A sing 263 n n C8 H8B P4A sing 264 n n C12 H12 P4A sing 265 n n C13 H13 P4A sing 266 n n C15 H15 P4A sing 267 n n C16 H16 P4A sing 268 n n C22 H22 P4A sing 269 n n C24 H24 P4A sing 270 n n C25 H25 P4A sing 271 n n O29 HO29 P4A sing 272 n n O30 HO30 P4A sing 273 n n C34 H34 P4A sing 274 n n C34 H34A P4A sing 275 n n C34 H34B P4A sing 276 n n # _atom_sites.entry_id 2ZDX _atom_sites.fract_transf_matrix[1][1] 0.014688 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002511 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014476 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011848 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 P4A A 1 500 500 P4A P4A . D 2 P4A B 1 1500 1500 P4A P4A . E 3 HOH A 1 501 2 HOH HOH . E 3 HOH A 2 502 6 HOH HOH . E 3 HOH A 3 503 7 HOH HOH . E 3 HOH A 4 504 9 HOH HOH . E 3 HOH A 5 505 10 HOH HOH . E 3 HOH A 6 506 11 HOH HOH . E 3 HOH A 7 507 12 HOH HOH . E 3 HOH A 8 508 13 HOH HOH . E 3 HOH A 9 509 14 HOH HOH . E 3 HOH A 10 510 15 HOH HOH . E 3 HOH A 11 511 18 HOH HOH . E 3 HOH A 12 512 20 HOH HOH . E 3 HOH A 13 513 21 HOH HOH . E 3 HOH A 14 514 22 HOH HOH . E 3 HOH A 15 515 27 HOH HOH . E 3 HOH A 16 516 28 HOH HOH . E 3 HOH A 17 517 29 HOH HOH . E 3 HOH A 18 518 31 HOH HOH . E 3 HOH A 19 519 32 HOH HOH . E 3 HOH A 20 520 33 HOH HOH . E 3 HOH A 21 521 35 HOH HOH . E 3 HOH A 22 522 36 HOH HOH . E 3 HOH A 23 523 38 HOH HOH . E 3 HOH A 24 524 40 HOH HOH . E 3 HOH A 25 525 44 HOH HOH . E 3 HOH A 26 526 45 HOH HOH . E 3 HOH A 27 527 47 HOH HOH . E 3 HOH A 28 528 50 HOH HOH . E 3 HOH A 29 529 52 HOH HOH . E 3 HOH A 30 530 53 HOH HOH . E 3 HOH A 31 531 55 HOH HOH . E 3 HOH A 32 532 56 HOH HOH . E 3 HOH A 33 533 57 HOH HOH . E 3 HOH A 34 534 59 HOH HOH . E 3 HOH A 35 535 60 HOH HOH . E 3 HOH A 36 536 61 HOH HOH . E 3 HOH A 37 537 62 HOH HOH . E 3 HOH A 38 538 63 HOH HOH . E 3 HOH A 39 539 64 HOH HOH . E 3 HOH A 40 540 68 HOH HOH . E 3 HOH A 41 541 69 HOH HOH . E 3 HOH A 42 542 72 HOH HOH . E 3 HOH A 43 543 77 HOH HOH . F 3 HOH B 1 1501 1 HOH HOH . F 3 HOH B 2 1502 3 HOH HOH . F 3 HOH B 3 1503 4 HOH HOH . F 3 HOH B 4 1504 5 HOH HOH . F 3 HOH B 5 1505 8 HOH HOH . F 3 HOH B 6 1506 16 HOH HOH . F 3 HOH B 7 1507 17 HOH HOH . F 3 HOH B 8 1508 19 HOH HOH . F 3 HOH B 9 1509 23 HOH HOH . F 3 HOH B 10 1510 24 HOH HOH . F 3 HOH B 11 1511 25 HOH HOH . F 3 HOH B 12 1512 26 HOH HOH . F 3 HOH B 13 1513 30 HOH HOH . F 3 HOH B 14 1514 34 HOH HOH . F 3 HOH B 15 1515 37 HOH HOH . F 3 HOH B 16 1516 39 HOH HOH . F 3 HOH B 17 1517 41 HOH HOH . F 3 HOH B 18 1518 42 HOH HOH . F 3 HOH B 19 1519 43 HOH HOH . F 3 HOH B 20 1520 46 HOH HOH . F 3 HOH B 21 1521 48 HOH HOH . F 3 HOH B 22 1522 49 HOH HOH . F 3 HOH B 23 1523 51 HOH HOH . F 3 HOH B 24 1524 54 HOH HOH . F 3 HOH B 25 1525 58 HOH HOH . F 3 HOH B 26 1526 65 HOH HOH . F 3 HOH B 27 1527 66 HOH HOH . F 3 HOH B 28 1528 67 HOH HOH . F 3 HOH B 29 1529 70 HOH HOH . F 3 HOH B 30 1530 71 HOH HOH . F 3 HOH B 31 1531 73 HOH HOH . F 3 HOH B 32 1532 74 HOH HOH . F 3 HOH B 33 1533 75 HOH HOH . F 3 HOH B 34 1534 76 HOH HOH . F 3 HOH B 35 1535 78 HOH HOH . F 3 HOH B 36 1536 79 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 P4A . . . D 2 -48.619 9.689 31.73 1 39.45 ? N1 P4A 1500 B 1 HETATM 2 N N2 P4A . . . D 2 -48.341 9.681 30.374 1 37.18 ? N2 P4A 1500 B 1 HETATM 3 C C3 P4A . . . D 2 -49.22 8.812 29.715 1 38.24 ? C3 P4A 1500 B 1 HETATM 4 C C4 P4A . . . D 2 -50.118 8.233 30.746 1 37.48 ? C4 P4A 1500 B 1 HETATM 5 C C5 P4A . . . D 2 -49.691 8.821 31.989 1 38.76 ? C5 P4A 1500 B 1 HETATM 6 C C6 P4A . . . D 2 -49.221 8.548 28.177 1 34.35 ? C6 P4A 1500 B 1 HETATM 7 C C7 P4A . . . D 2 -51.268 7.205 30.448 1 42.36 ? C7 P4A 1500 B 1 HETATM 8 C C8 P4A . . . D 2 -50.213 8.639 33.424 1 38.75 ? C8 P4A 1500 B 1 HETATM 9 C C12 P4A . . . D 2 -52.41 7.573 29.625 1 43.92 ? C12 P4A 1500 B 1 HETATM 10 C C13 P4A . . . D 2 -53.459 6.646 29.328 1 47.28 ? C13 P4A 1500 B 1 HETATM 11 C C14 P4A . . . D 2 -53.405 5.288 29.853 1 47.3 ? C14 P4A 1500 B 1 HETATM 12 C C15 P4A . . . D 2 -52.276 4.882 30.681 1 45.67 ? C15 P4A 1500 B 1 HETATM 13 C C16 P4A . . . D 2 -51.221 5.828 30.973 1 43.31 ? C16 P4A 1500 B 1 HETATM 14 C C21 P4A . . . D 2 -49.114 9.674 27.24 1 33.66 ? C21 P4A 1500 B 1 HETATM 15 C C22 P4A . . . D 2 -49.13 9.444 25.818 1 35.71 ? C22 P4A 1500 B 1 HETATM 16 C C23 P4A . . . D 2 -49.254 8.104 25.3 1 35.19 ? C23 P4A 1500 B 1 HETATM 17 C C24 P4A . . . D 2 -49.357 6.989 26.192 1 35.64 ? C24 P4A 1500 B 1 HETATM 18 C C25 P4A . . . D 2 -49.34 7.205 27.603 1 32.86 ? C25 P4A 1500 B 1 HETATM 19 O O29 P4A . . . D 2 -49.278 7.897 23.955 1 35.12 ? O29 P4A 1500 B 1 HETATM 20 O O30 P4A . . . D 2 -49.002 10.946 27.671 1 32.88 ? O30 P4A 1500 B 1 HETATM 21 O O33 P4A . . . D 2 -54.443 4.376 29.554 1 50.06 ? O33 P4A 1500 B 1 HETATM 22 C C34 P4A . . . D 2 -55.58 4.556 30.444 1 53.21 ? C34 P4A 1500 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 22 #