data_2ZFP
#
_model_server_result.job_id            bhcHqTY2vzC24rpF5qVOgg 
_model_server_result.datetime_utc      '2024-11-26 08:33:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2zfp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":801}' 
#
_entry.id    2ZFP 
#
_exptl.entry_id    2ZFP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              323.818 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1-[(2R)-2-aminobutanoyl]-N-(3-chlorobenzyl)-L-prolinamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          100.6 
_cell.angle_gamma         90 
_cell.entry_id            2ZFP 
_cell.length_a            70.5 
_cell.length_b            71.3 
_cell.length_c            72.9 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2ZFP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 9 L CYS 1 1_555 B SG CYS 119 H CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf2 B SG CYS 28 H CYS 42 1_555 B SG CYS 44 H CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? 
disulf ? disulf3 B SG CYS 173 H CYS 168 1_555 B SG CYS 187 H CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.885 ? 
disulf ? disulf4 B SG CYS 201 H CYS 191 1_555 B SG CYS 231 H CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? 
#
_chem_comp.formula           'C16 H22 Cl N3 O2' 
_chem_comp.formula_weight    323.818 
_chem_comp.id                19U 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1-[(2R)-2-aminobutanoyl]-N-(3-chlorobenzyl)-L-prolinamide 
_chem_comp.type              peptide-like 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C4 19U sing 1 n n 
N1 C14 19U sing 2 n n 
N1 C12 19U sing 3 n n 
C4 C3 19U sing 4 n n 
C7 C12 19U sing 5 n n 
C7 N23 19U sing 6 n n 
C7 O22 19U doub 7 n n 
C15 C1 19U sing 8 n n 
C15 N 19U sing 9 n n 
C15 C14 19U sing 10 n n 
C17 C1 19U sing 11 n n 
C24 N23 19U sing 12 n n 
C24 C25 19U sing 13 n n 
C26 C25 19U doub 14 n y 
C26 C27 19U sing 15 n y 
C28 C29 19U sing 16 n y 
C28 C27 19U doub 17 n y 
C14 O32 19U doub 18 n n 
C3 C2 19U sing 19 n n 
C2 C12 19U sing 20 n n 
C25 C30 19U sing 21 n y 
C30 C29 19U doub 22 n y 
C29 CL21 19U sing 23 n n 
C4 H4 19U sing 24 n n 
C4 H4A 19U sing 25 n n 
C15 H15 19U sing 26 n n 
C17 H17 19U sing 27 n n 
C17 H17A 19U sing 28 n n 
C17 H17B 19U sing 29 n n 
C24 H24 19U sing 30 n n 
C24 H24A 19U sing 31 n n 
C26 H26 19U sing 32 n n 
C28 H28 19U sing 33 n n 
C1 H1 19U sing 34 n n 
C1 H1A 19U sing 35 n n 
N HN 19U sing 36 n n 
N HNA 19U sing 37 n n 
C3 H3 19U sing 38 n n 
C3 H3A 19U sing 39 n n 
C2 H2 19U sing 40 n n 
C2 H2A 19U sing 41 n n 
C12 H12 19U sing 42 n n 
N23 HN23 19U sing 43 n n 
C30 H30 19U sing 44 n n 
C27 H27 19U sing 45 n n 
#
_atom_sites.entry_id                     2ZFP 
_atom_sites.fract_transf_matrix[1][1]    0.014184 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002655 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014025 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013956 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 NA H 1 802 802 NA NA . 
E 4 NA H 1 803 803 NA NA . 
F 5 19U H 1 801 801 19U 19U . 
G 6 HOH L 1 1003 1003 HOH HOH . 
G 6 HOH L 2 1004 1004 HOH HOH . 
G 6 HOH L 3 1021 1021 HOH HOH . 
G 6 HOH L 4 1025 1025 HOH HOH . 
G 6 HOH L 5 1026 1026 HOH HOH . 
G 6 HOH L 6 1028 1028 HOH HOH . 
G 6 HOH L 7 1044 1044 HOH HOH . 
G 6 HOH L 8 1059 1059 HOH HOH . 
G 6 HOH L 9 1060 1060 HOH HOH . 
G 6 HOH L 10 1084 1084 HOH HOH . 
G 6 HOH L 11 1095 1095 HOH HOH . 
G 6 HOH L 12 1113 1113 HOH HOH . 
G 6 HOH L 13 1116 1116 HOH HOH . 
G 6 HOH L 14 1117 1117 HOH HOH . 
G 6 HOH L 15 1130 1130 HOH HOH . 
G 6 HOH L 16 1132 1132 HOH HOH . 
G 6 HOH L 17 1137 1137 HOH HOH . 
G 6 HOH L 18 1141 1141 HOH HOH . 
H 6 HOH H 1 1001 1001 HOH HOH . 
H 6 HOH H 2 1002 1002 HOH HOH . 
H 6 HOH H 3 1005 1005 HOH HOH . 
H 6 HOH H 4 1006 1006 HOH HOH . 
H 6 HOH H 5 1007 1007 HOH HOH . 
H 6 HOH H 6 1008 1008 HOH HOH . 
H 6 HOH H 7 1009 1009 HOH HOH . 
H 6 HOH H 8 1010 1010 HOH HOH . 
H 6 HOH H 9 1011 1011 HOH HOH . 
H 6 HOH H 10 1012 1012 HOH HOH . 
H 6 HOH H 11 1013 1013 HOH HOH . 
H 6 HOH H 12 1014 1014 HOH HOH . 
H 6 HOH H 13 1015 1015 HOH HOH . 
H 6 HOH H 14 1016 1016 HOH HOH . 
H 6 HOH H 15 1017 1017 HOH HOH . 
H 6 HOH H 16 1018 1018 HOH HOH . 
H 6 HOH H 17 1019 1019 HOH HOH . 
H 6 HOH H 18 1020 1020 HOH HOH . 
H 6 HOH H 19 1022 1022 HOH HOH . 
H 6 HOH H 20 1023 1023 HOH HOH . 
H 6 HOH H 21 1024 1024 HOH HOH . 
H 6 HOH H 22 1027 1027 HOH HOH . 
H 6 HOH H 23 1029 1029 HOH HOH . 
H 6 HOH H 24 1030 1030 HOH HOH . 
H 6 HOH H 25 1031 1031 HOH HOH . 
H 6 HOH H 26 1032 1032 HOH HOH . 
H 6 HOH H 27 1033 1033 HOH HOH . 
H 6 HOH H 28 1034 1034 HOH HOH . 
H 6 HOH H 29 1035 1035 HOH HOH . 
H 6 HOH H 30 1036 1036 HOH HOH . 
H 6 HOH H 31 1037 1037 HOH HOH . 
H 6 HOH H 32 1038 1038 HOH HOH . 
H 6 HOH H 33 1039 1039 HOH HOH . 
H 6 HOH H 34 1040 1040 HOH HOH . 
H 6 HOH H 35 1041 1041 HOH HOH . 
H 6 HOH H 36 1042 1042 HOH HOH . 
H 6 HOH H 37 1043 1043 HOH HOH . 
H 6 HOH H 38 1045 1045 HOH HOH . 
H 6 HOH H 39 1046 1046 HOH HOH . 
H 6 HOH H 40 1047 1047 HOH HOH . 
H 6 HOH H 41 1048 1048 HOH HOH . 
H 6 HOH H 42 1049 1049 HOH HOH . 
H 6 HOH H 43 1050 1050 HOH HOH . 
H 6 HOH H 44 1051 1051 HOH HOH . 
H 6 HOH H 45 1052 1052 HOH HOH . 
H 6 HOH H 46 1053 1053 HOH HOH . 
H 6 HOH H 47 1054 1054 HOH HOH . 
H 6 HOH H 48 1055 1055 HOH HOH . 
H 6 HOH H 49 1056 1056 HOH HOH . 
H 6 HOH H 50 1057 1057 HOH HOH . 
H 6 HOH H 51 1058 1058 HOH HOH . 
H 6 HOH H 52 1061 1061 HOH HOH . 
H 6 HOH H 53 1062 1062 HOH HOH . 
H 6 HOH H 54 1063 1063 HOH HOH . 
H 6 HOH H 55 1064 1064 HOH HOH . 
H 6 HOH H 56 1065 1065 HOH HOH . 
H 6 HOH H 57 1066 1066 HOH HOH . 
H 6 HOH H 58 1067 1067 HOH HOH . 
H 6 HOH H 59 1068 1068 HOH HOH . 
H 6 HOH H 60 1069 1069 HOH HOH . 
H 6 HOH H 61 1070 1070 HOH HOH . 
H 6 HOH H 62 1071 1071 HOH HOH . 
H 6 HOH H 63 1072 1072 HOH HOH . 
H 6 HOH H 64 1074 1074 HOH HOH . 
H 6 HOH H 65 1075 1075 HOH HOH . 
H 6 HOH H 66 1076 1076 HOH HOH . 
H 6 HOH H 67 1077 1077 HOH HOH . 
H 6 HOH H 68 1078 1078 HOH HOH . 
H 6 HOH H 69 1079 1079 HOH HOH . 
H 6 HOH H 70 1080 1080 HOH HOH . 
H 6 HOH H 71 1081 1081 HOH HOH . 
H 6 HOH H 72 1082 1082 HOH HOH . 
H 6 HOH H 73 1083 1083 HOH HOH . 
H 6 HOH H 74 1085 1085 HOH HOH . 
H 6 HOH H 75 1086 1086 HOH HOH . 
H 6 HOH H 76 1087 1087 HOH HOH . 
H 6 HOH H 77 1088 1088 HOH HOH . 
H 6 HOH H 78 1089 1089 HOH HOH . 
H 6 HOH H 79 1090 1090 HOH HOH . 
H 6 HOH H 80 1091 1091 HOH HOH . 
H 6 HOH H 81 1092 1092 HOH HOH . 
H 6 HOH H 82 1093 1093 HOH HOH . 
H 6 HOH H 83 1094 1094 HOH HOH . 
H 6 HOH H 84 1096 1096 HOH HOH . 
H 6 HOH H 85 1097 1097 HOH HOH . 
H 6 HOH H 86 1098 1098 HOH HOH . 
H 6 HOH H 87 1099 1099 HOH HOH . 
H 6 HOH H 88 1100 1100 HOH HOH . 
H 6 HOH H 89 1101 1101 HOH HOH . 
H 6 HOH H 90 1102 1102 HOH HOH . 
H 6 HOH H 91 1103 1103 HOH HOH . 
H 6 HOH H 92 1104 1104 HOH HOH . 
H 6 HOH H 93 1105 1105 HOH HOH . 
H 6 HOH H 94 1106 1106 HOH HOH . 
H 6 HOH H 95 1107 1107 HOH HOH . 
H 6 HOH H 96 1109 1109 HOH HOH . 
H 6 HOH H 97 1110 1110 HOH HOH . 
H 6 HOH H 98 1111 1111 HOH HOH . 
H 6 HOH H 99 1112 1112 HOH HOH . 
H 6 HOH H 100 1114 1114 HOH HOH . 
H 6 HOH H 101 1115 1115 HOH HOH . 
H 6 HOH H 102 1118 1118 HOH HOH . 
H 6 HOH H 103 1119 1119 HOH HOH . 
H 6 HOH H 104 1120 1120 HOH HOH . 
H 6 HOH H 105 1121 1121 HOH HOH . 
H 6 HOH H 106 1123 1123 HOH HOH . 
H 6 HOH H 107 1124 1124 HOH HOH . 
H 6 HOH H 108 1125 1125 HOH HOH . 
H 6 HOH H 109 1126 1126 HOH HOH . 
H 6 HOH H 110 1127 1127 HOH HOH . 
H 6 HOH H 111 1128 1128 HOH HOH . 
H 6 HOH H 112 1129 1129 HOH HOH . 
H 6 HOH H 113 1131 1131 HOH HOH . 
H 6 HOH H 114 1133 1133 HOH HOH . 
H 6 HOH H 115 1134 1134 HOH HOH . 
H 6 HOH H 116 1135 1135 HOH HOH . 
H 6 HOH H 117 1136 1136 HOH HOH . 
H 6 HOH H 118 1138 1138 HOH HOH . 
H 6 HOH H 119 1139 1139 HOH HOH . 
H 6 HOH H 120 1140 1140 HOH HOH . 
H 6 HOH H 121 1142 1142 HOH HOH . 
I 6 HOH I 1 1073 1073 HOH HOH . 
I 6 HOH I 2 1108 1108 HOH HOH . 
I 6 HOH I 3 1122 1122 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N 19U . . . F 5 16.537 -15.836 23.31 1 23.82 ? N 19U 801 H 1 
HETATM 2 C C15 19U . . . F 5 17.746 -15.006 23.098 1 31.14 ? C15 19U 801 H 1 
HETATM 3 C C14 19U . . . F 5 17.384 -13.671 22.46 1 29.4 ? C14 19U 801 H 1 
HETATM 4 O O32 19U . . . F 5 16.375 -13.14 22.914 1 8.75 ? O32 19U 801 H 1 
HETATM 5 C C1 19U . . . F 5 18.383 -14.722 24.487 1 30.23 ? C1 19U 801 H 1 
HETATM 6 C C17 19U . . . F 5 19.813 -14.181 24.295 1 36.61 ? C17 19U 801 H 1 
HETATM 7 N N1 19U . . . F 5 18.112 -13.104 21.46 1 24.44 ? N1 19U 801 H 1 
HETATM 8 C C12 19U . . . F 5 17.782 -11.787 20.929 1 20.34 ? C12 19U 801 H 1 
HETATM 9 C C7 19U . . . F 5 16.329 -11.634 20.572 1 25.97 ? C7 19U 801 H 1 
HETATM 10 O O22 19U . . . F 5 15.731 -12.594 20.103 1 34.15 ? O22 19U 801 H 1 
HETATM 11 C C2 19U . . . F 5 18.704 -11.801 19.68 1 21.78 ? C2 19U 801 H 1 
HETATM 12 C C3 19U . . . F 5 19.993 -12.447 20.264 1 18.53 ? C3 19U 801 H 1 
HETATM 13 C C4 19U . . . F 5 19.417 -13.646 21.065 1 15.54 ? C4 19U 801 H 1 
HETATM 14 N N23 19U . . . F 5 15.692 -10.455 20.8 1 18.06 ? N23 19U 801 H 1 
HETATM 15 C C24 19U . . . F 5 14.302 -10.357 20.361 1 15.16 ? C24 19U 801 H 1 
HETATM 16 C C25 19U . . . F 5 13.307 -10.353 21.524 1 14.04 ? C25 19U 801 H 1 
HETATM 17 C C26 19U . . . F 5 12.458 -11.456 21.675 1 15.18 ? C26 19U 801 H 1 
HETATM 18 C C27 19U . . . F 5 11.531 -11.506 22.718 1 20.09 ? C27 19U 801 H 1 
HETATM 19 C C28 19U . . . F 5 11.444 -10.445 23.626 1 28.13 ? C28 19U 801 H 1 
HETATM 20 C C29 19U . . . F 5 12.286 -9.332 23.49 1 30.24 ? C29 19U 801 H 1 
HETATM 21 C C30 19U . . . F 5 13.211 -9.295 22.438 1 16.55 ? C30 19U 801 H 1 
HETATM 22 CL CL21 19U . . . F 5 12.158 -8.008 24.645 1 27.69 ? CL21 19U 801 H 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           349 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           22 
#