data_2ZI4 # _model_server_result.job_id fWx1FAgeHuS-HzfCL607hw _model_server_result.datetime_utc '2024-11-22 20:01:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2zi4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 2ZI4 # _exptl.entry_id 2ZI4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2ZI4 _cell.length_a 79.73 _cell.length_b 79.73 _cell.length_c 93.53 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ZI4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 -y,-x,-z+1/2 0 -1 0 -1 0 0 0 0 -1 0 0 46.765 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 54 A SER 35 1_555 B MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? metalc ? metalc2 A OE1 GLU 146 A GLU 127 1_555 B MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? metalc ? metalc3 D O1B ADP . A ADP 301 1_555 B MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? metalc ? metalc4 B MG MG . A MG 501 1_555 E O HOH . A HOH 551 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.189 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2ZI4 _atom_sites.fract_transf_matrix[1][1] 0.012542 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012542 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010692 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 501 501 MG MG . C 3 3L1 A 1 401 401 3L1 LAD . D 4 ADP A 1 301 301 ADP ADP . E 5 HOH A 1 502 1 HOH HOH . E 5 HOH A 2 503 2 HOH HOH . E 5 HOH A 3 504 3 HOH HOH . E 5 HOH A 4 505 4 HOH HOH . E 5 HOH A 5 506 5 HOH HOH . E 5 HOH A 6 507 6 HOH HOH . E 5 HOH A 7 508 7 HOH HOH . E 5 HOH A 8 509 8 HOH HOH . E 5 HOH A 9 510 9 HOH HOH . E 5 HOH A 10 511 10 HOH HOH . E 5 HOH A 11 512 11 HOH HOH . E 5 HOH A 12 513 12 HOH HOH . E 5 HOH A 13 514 13 HOH HOH . E 5 HOH A 14 515 14 HOH HOH . E 5 HOH A 15 516 15 HOH HOH . E 5 HOH A 16 517 16 HOH HOH . E 5 HOH A 17 518 17 HOH HOH . E 5 HOH A 18 519 18 HOH HOH . E 5 HOH A 19 520 19 HOH HOH . E 5 HOH A 20 521 20 HOH HOH . E 5 HOH A 21 522 21 HOH HOH . E 5 HOH A 22 523 22 HOH HOH . E 5 HOH A 23 524 23 HOH HOH . E 5 HOH A 24 525 24 HOH HOH . E 5 HOH A 25 526 26 HOH HOH . E 5 HOH A 26 527 27 HOH HOH . E 5 HOH A 27 528 29 HOH HOH . E 5 HOH A 28 529 30 HOH HOH . E 5 HOH A 29 530 31 HOH HOH . E 5 HOH A 30 531 32 HOH HOH . E 5 HOH A 31 532 33 HOH HOH . E 5 HOH A 32 533 34 HOH HOH . E 5 HOH A 33 534 35 HOH HOH . E 5 HOH A 34 535 37 HOH HOH . E 5 HOH A 35 536 38 HOH HOH . E 5 HOH A 36 537 40 HOH HOH . E 5 HOH A 37 538 41 HOH HOH . E 5 HOH A 38 539 42 HOH HOH . E 5 HOH A 39 540 43 HOH HOH . E 5 HOH A 40 541 44 HOH HOH . E 5 HOH A 41 542 45 HOH HOH . E 5 HOH A 42 543 46 HOH HOH . E 5 HOH A 43 544 47 HOH HOH . E 5 HOH A 44 545 48 HOH HOH . E 5 HOH A 45 546 49 HOH HOH . E 5 HOH A 46 547 50 HOH HOH . E 5 HOH A 47 548 51 HOH HOH . E 5 HOH A 48 549 52 HOH HOH . E 5 HOH A 49 550 53 HOH HOH . E 5 HOH A 50 551 54 HOH HOH . E 5 HOH A 51 552 55 HOH HOH . E 5 HOH A 52 553 56 HOH HOH . E 5 HOH A 53 554 57 HOH HOH . E 5 HOH A 54 555 58 HOH HOH . E 5 HOH A 55 556 59 HOH HOH . E 5 HOH A 56 557 60 HOH HOH . E 5 HOH A 57 558 62 HOH HOH . E 5 HOH A 58 559 63 HOH HOH . E 5 HOH A 59 560 64 HOH HOH . E 5 HOH A 60 561 66 HOH HOH . E 5 HOH A 61 562 67 HOH HOH . E 5 HOH A 62 563 68 HOH HOH . E 5 HOH A 63 564 69 HOH HOH . E 5 HOH A 64 565 70 HOH HOH . E 5 HOH A 65 566 71 HOH HOH . E 5 HOH A 66 567 72 HOH HOH . E 5 HOH A 67 568 73 HOH HOH . E 5 HOH A 68 569 75 HOH HOH . E 5 HOH A 69 570 76 HOH HOH . E 5 HOH A 70 571 77 HOH HOH . E 5 HOH A 71 572 78 HOH HOH . E 5 HOH A 72 573 79 HOH HOH . E 5 HOH A 73 574 80 HOH HOH . E 5 HOH A 74 575 81 HOH HOH . E 5 HOH A 75 576 82 HOH HOH . E 5 HOH A 76 577 83 HOH HOH . E 5 HOH A 77 578 84 HOH HOH . E 5 HOH A 78 579 85 HOH HOH . E 5 HOH A 79 580 86 HOH HOH . E 5 HOH A 80 581 87 HOH HOH . E 5 HOH A 81 582 88 HOH HOH . E 5 HOH A 82 583 89 HOH HOH . E 5 HOH A 83 584 90 HOH HOH . E 5 HOH A 84 585 91 HOH HOH . E 5 HOH A 85 586 92 HOH HOH . E 5 HOH A 86 587 93 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 30.229 _atom_site.Cartn_y 2.304 _atom_site.Cartn_z 21.481 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 27.67 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 501 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #