data_2ZIM
#
_model_server_result.job_id            HGGsHkHsIxlnkGe1lwwJJQ 
_model_server_result.datetime_utc      '2025-01-11 04:59:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2zim 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":911}' 
#
_entry.id    2ZIM 
#
_exptl.entry_id    2ZIM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    10 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            2ZIM 
_cell.length_a            105.07 
_cell.length_b            105.07 
_cell.length_c            70.262 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2ZIM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        172 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 64' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 52.535 90.993289 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     2ZIM 
_atom_sites.fract_transf_matrix[1][1]    0.009517 
_atom_sites.fract_transf_matrix[1][2]    0.005495 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01099 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014232 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 EDO A 1 902 902 EDO EDO . 
C 2 EDO A 1 903 903 EDO EDO . 
D 2 EDO A 1 904 904 EDO EDO . 
E 2 EDO A 1 905 905 EDO EDO . 
F 2 EDO A 1 906 906 EDO EDO . 
G 2 EDO A 1 907 907 EDO EDO . 
H 2 EDO A 1 908 908 EDO EDO . 
I 2 EDO A 1 909 909 EDO EDO . 
J 2 EDO A 1 910 910 EDO EDO . 
K 2 EDO A 1 911 911 EDO EDO . 
L 3 YLY A 1 1 1 YLY YLY . 
M 4 POP A 1 901 901 POP POP . 
N 5 HOH A 1 912 1 HOH HOH . 
N 5 HOH A 2 913 2 HOH HOH . 
N 5 HOH A 3 914 3 HOH HOH . 
N 5 HOH A 4 915 4 HOH HOH . 
N 5 HOH A 5 916 5 HOH HOH . 
N 5 HOH A 6 917 7 HOH HOH . 
N 5 HOH A 7 918 8 HOH HOH . 
N 5 HOH A 8 919 9 HOH HOH . 
N 5 HOH A 9 920 10 HOH HOH . 
N 5 HOH A 10 921 11 HOH HOH . 
N 5 HOH A 11 922 12 HOH HOH . 
N 5 HOH A 12 923 13 HOH HOH . 
N 5 HOH A 13 924 14 HOH HOH . 
N 5 HOH A 14 925 15 HOH HOH . 
N 5 HOH A 15 926 16 HOH HOH . 
N 5 HOH A 16 927 18 HOH HOH . 
N 5 HOH A 17 928 20 HOH HOH . 
N 5 HOH A 18 929 21 HOH HOH . 
N 5 HOH A 19 930 22 HOH HOH . 
N 5 HOH A 20 931 23 HOH HOH . 
N 5 HOH A 21 932 24 HOH HOH . 
N 5 HOH A 22 933 26 HOH HOH . 
N 5 HOH A 23 934 27 HOH HOH . 
N 5 HOH A 24 935 28 HOH HOH . 
N 5 HOH A 25 936 29 HOH HOH . 
N 5 HOH A 26 937 30 HOH HOH . 
N 5 HOH A 27 938 31 HOH HOH . 
N 5 HOH A 28 939 32 HOH HOH . 
N 5 HOH A 29 940 33 HOH HOH . 
N 5 HOH A 30 941 34 HOH HOH . 
N 5 HOH A 31 942 35 HOH HOH . 
N 5 HOH A 32 943 36 HOH HOH . 
N 5 HOH A 33 944 37 HOH HOH . 
N 5 HOH A 34 945 38 HOH HOH . 
N 5 HOH A 35 946 39 HOH HOH . 
N 5 HOH A 36 947 40 HOH HOH . 
N 5 HOH A 37 948 41 HOH HOH . 
N 5 HOH A 38 949 42 HOH HOH . 
N 5 HOH A 39 950 43 HOH HOH . 
N 5 HOH A 40 951 44 HOH HOH . 
N 5 HOH A 41 952 45 HOH HOH . 
N 5 HOH A 42 953 46 HOH HOH . 
N 5 HOH A 43 954 47 HOH HOH . 
N 5 HOH A 44 955 48 HOH HOH . 
N 5 HOH A 45 956 50 HOH HOH . 
N 5 HOH A 46 957 51 HOH HOH . 
N 5 HOH A 47 958 53 HOH HOH . 
N 5 HOH A 48 959 54 HOH HOH . 
N 5 HOH A 49 960 55 HOH HOH . 
N 5 HOH A 50 961 56 HOH HOH . 
N 5 HOH A 51 962 57 HOH HOH . 
N 5 HOH A 52 963 58 HOH HOH . 
N 5 HOH A 53 964 59 HOH HOH . 
N 5 HOH A 54 965 60 HOH HOH . 
N 5 HOH A 55 966 61 HOH HOH . 
N 5 HOH A 56 967 62 HOH HOH . 
N 5 HOH A 57 968 64 HOH HOH . 
N 5 HOH A 58 969 65 HOH HOH . 
N 5 HOH A 59 970 66 HOH HOH . 
N 5 HOH A 60 971 67 HOH HOH . 
N 5 HOH A 61 972 68 HOH HOH . 
N 5 HOH A 62 973 69 HOH HOH . 
N 5 HOH A 63 974 70 HOH HOH . 
N 5 HOH A 64 975 71 HOH HOH . 
N 5 HOH A 65 976 72 HOH HOH . 
N 5 HOH A 66 977 73 HOH HOH . 
N 5 HOH A 67 978 74 HOH HOH . 
N 5 HOH A 68 979 75 HOH HOH . 
N 5 HOH A 69 980 76 HOH HOH . 
N 5 HOH A 70 981 77 HOH HOH . 
N 5 HOH A 71 982 78 HOH HOH . 
N 5 HOH A 72 983 79 HOH HOH . 
N 5 HOH A 73 984 81 HOH HOH . 
N 5 HOH A 74 985 82 HOH HOH . 
N 5 HOH A 75 986 83 HOH HOH . 
N 5 HOH A 76 987 84 HOH HOH . 
N 5 HOH A 77 988 85 HOH HOH . 
N 5 HOH A 78 989 86 HOH HOH . 
N 5 HOH A 79 990 87 HOH HOH . 
N 5 HOH A 80 991 88 HOH HOH . 
N 5 HOH A 81 992 89 HOH HOH . 
N 5 HOH A 82 993 90 HOH HOH . 
N 5 HOH A 83 994 92 HOH HOH . 
N 5 HOH A 84 995 93 HOH HOH . 
N 5 HOH A 85 996 94 HOH HOH . 
N 5 HOH A 86 997 95 HOH HOH . 
N 5 HOH A 87 998 97 HOH HOH . 
N 5 HOH A 88 999 99 HOH HOH . 
N 5 HOH A 89 1000 102 HOH HOH . 
N 5 HOH A 90 1001 103 HOH HOH . 
N 5 HOH A 91 1002 104 HOH HOH . 
N 5 HOH A 92 1003 105 HOH HOH . 
N 5 HOH A 93 1004 106 HOH HOH . 
N 5 HOH A 94 1005 108 HOH HOH . 
N 5 HOH A 95 1006 112 HOH HOH . 
N 5 HOH A 96 1007 114 HOH HOH . 
N 5 HOH A 97 1008 116 HOH HOH . 
N 5 HOH A 98 1009 117 HOH HOH . 
N 5 HOH A 99 1010 119 HOH HOH . 
N 5 HOH A 100 1011 120 HOH HOH . 
N 5 HOH A 101 1012 121 HOH HOH . 
N 5 HOH A 102 1013 126 HOH HOH . 
N 5 HOH A 103 1014 127 HOH HOH . 
N 5 HOH A 104 1015 128 HOH HOH . 
N 5 HOH A 105 1016 129 HOH HOH . 
N 5 HOH A 106 1017 130 HOH HOH . 
N 5 HOH A 107 1018 131 HOH HOH . 
N 5 HOH A 108 1019 132 HOH HOH . 
N 5 HOH A 109 1020 133 HOH HOH . 
N 5 HOH A 110 1021 134 HOH HOH . 
N 5 HOH A 111 1022 136 HOH HOH . 
N 5 HOH A 112 1023 138 HOH HOH . 
N 5 HOH A 113 1024 139 HOH HOH . 
N 5 HOH A 114 1025 140 HOH HOH . 
N 5 HOH A 115 1026 142 HOH HOH . 
N 5 HOH A 116 1027 144 HOH HOH . 
N 5 HOH A 117 1028 145 HOH HOH . 
N 5 HOH A 118 1029 146 HOH HOH . 
N 5 HOH A 119 1030 148 HOH HOH . 
N 5 HOH A 120 1031 151 HOH HOH . 
N 5 HOH A 121 1032 153 HOH HOH . 
N 5 HOH A 122 1033 154 HOH HOH . 
N 5 HOH A 123 1034 155 HOH HOH . 
N 5 HOH A 124 1035 160 HOH HOH . 
N 5 HOH A 125 1036 161 HOH HOH . 
N 5 HOH A 126 1037 165 HOH HOH . 
N 5 HOH A 127 1038 167 HOH HOH . 
N 5 HOH A 128 1039 169 HOH HOH . 
N 5 HOH A 129 1040 170 HOH HOH . 
N 5 HOH A 130 1041 172 HOH HOH . 
N 5 HOH A 131 1042 174 HOH HOH . 
N 5 HOH A 132 1043 176 HOH HOH . 
N 5 HOH A 133 1044 177 HOH HOH . 
N 5 HOH A 134 1045 178 HOH HOH . 
N 5 HOH A 135 1046 179 HOH HOH . 
N 5 HOH A 136 1047 180 HOH HOH . 
N 5 HOH A 137 1048 181 HOH HOH . 
N 5 HOH A 138 1049 182 HOH HOH . 
N 5 HOH A 139 1050 183 HOH HOH . 
N 5 HOH A 140 1051 184 HOH HOH . 
N 5 HOH A 141 1052 185 HOH HOH . 
N 5 HOH A 142 1053 186 HOH HOH . 
N 5 HOH A 143 1054 187 HOH HOH . 
N 5 HOH A 144 1055 188 HOH HOH . 
N 5 HOH A 145 1056 189 HOH HOH . 
N 5 HOH A 146 1057 191 HOH HOH . 
N 5 HOH A 147 1058 192 HOH HOH . 
N 5 HOH A 148 1059 194 HOH HOH . 
N 5 HOH A 149 1060 195 HOH HOH . 
N 5 HOH A 150 1061 196 HOH HOH . 
N 5 HOH A 151 1062 197 HOH HOH . 
N 5 HOH A 152 1063 198 HOH HOH . 
N 5 HOH A 153 1064 199 HOH HOH . 
N 5 HOH A 154 1065 200 HOH HOH . 
N 5 HOH A 155 1066 206 HOH HOH . 
N 5 HOH A 156 1067 207 HOH HOH . 
N 5 HOH A 157 1068 208 HOH HOH . 
N 5 HOH A 158 1069 209 HOH HOH . 
N 5 HOH A 159 1070 210 HOH HOH . 
N 5 HOH A 160 1071 212 HOH HOH . 
N 5 HOH A 161 1072 213 HOH HOH . 
N 5 HOH A 162 1073 214 HOH HOH . 
N 5 HOH A 163 1074 215 HOH HOH . 
N 5 HOH A 164 1075 216 HOH HOH . 
N 5 HOH A 165 1076 217 HOH HOH . 
N 5 HOH A 166 1077 218 HOH HOH . 
N 5 HOH A 167 1078 221 HOH HOH . 
N 5 HOH A 168 1079 222 HOH HOH . 
N 5 HOH A 169 1080 223 HOH HOH . 
N 5 HOH A 170 1081 227 HOH HOH . 
N 5 HOH A 171 1082 228 HOH HOH . 
N 5 HOH A 172 1083 229 HOH HOH . 
N 5 HOH A 173 1084 230 HOH HOH . 
N 5 HOH A 174 1085 231 HOH HOH . 
N 5 HOH A 175 1086 233 HOH HOH . 
N 5 HOH A 176 1087 234 HOH HOH . 
N 5 HOH A 177 1088 235 HOH HOH . 
N 5 HOH A 178 1089 236 HOH HOH . 
N 5 HOH A 179 1090 237 HOH HOH . 
N 5 HOH A 180 1091 239 HOH HOH . 
N 5 HOH A 181 1092 240 HOH HOH . 
N 5 HOH A 182 1093 241 HOH HOH . 
N 5 HOH A 183 1094 242 HOH HOH . 
N 5 HOH A 184 1095 243 HOH HOH . 
N 5 HOH A 185 1096 244 HOH HOH . 
N 5 HOH A 186 1097 245 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . K 2 37.678 25.905 10.881 1 79.14 ? C1 EDO 911 A 1 
HETATM 2 O O1 EDO . . . K 2 36.48 25.889 10.09 1 79.35 ? O1 EDO 911 A 1 
HETATM 3 C C2 EDO . . . K 2 37.491 24.98 12.085 1 78.91 ? C2 EDO 911 A 1 
HETATM 4 O O2 EDO . . . K 2 38.738 24.824 12.781 1 79.06 ? O2 EDO 911 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           334 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           4 
#