data_2ZIN # _model_server_result.job_id e5LbBIenBshW32fbUTkpsg _model_server_result.datetime_utc '2025-01-11 04:50:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2zin # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":2011}' # _entry.id 2ZIN # _exptl.entry_id 2ZIN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2ZIN _cell.length_a 104.71 _cell.length_b 104.71 _cell.length_c 70.55 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ZIN _symmetry.cell_setting ? _symmetry.Int_Tables_number 172 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 -52.355 90.68152 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 236 A SER 399 1_555 C MG MG . A MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc2 D O1G ANP . A ANP 501 1_555 B MG MG . A MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc3 D O1B ANP . A ANP 501 1_555 B MG MG . A MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc4 D O2B ANP . A ANP 501 1_555 C MG MG . A MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? metalc ? metalc5 D O1A ANP . A ANP 501 1_555 C MG MG . A MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.436 ? metalc ? metalc6 B MG MG . A MG 701 1_555 G O HOH . A HOH 2141 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? metalc ? metalc7 B MG MG . A MG 701 1_555 G O HOH . A HOH 2161 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc8 B MG MG . A MG 701 1_555 G O HOH . A HOH 2188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? metalc ? metalc9 B MG MG . A MG 701 1_555 G O HOH . A HOH 2193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc10 C MG MG . A MG 702 1_555 G O HOH . A HOH 2060 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 133 n n C1 C2 EDO sing 134 n n C1 H11 EDO sing 135 n n C1 H12 EDO sing 136 n n O1 HO1 EDO sing 137 n n C2 O2 EDO sing 138 n n C2 H21 EDO sing 139 n n C2 H22 EDO sing 140 n n O2 HO2 EDO sing 141 n n # _atom_sites.entry_id 2ZIN _atom_sites.fract_transf_matrix[1][1] 0.00955 _atom_sites.fract_transf_matrix[1][2] 0.005514 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011028 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014174 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 701 701 MG MG . C 2 MG A 1 702 702 MG MG . D 3 ANP A 1 501 501 ANP ACP . E 4 LBY A 1 601 601 LBY DRG . F 5 EDO A 1 2011 2011 EDO EDO . G 6 HOH A 1 2012 1 HOH TIP . G 6 HOH A 2 2013 2 HOH TIP . G 6 HOH A 3 2014 3 HOH TIP . G 6 HOH A 4 2015 4 HOH TIP . G 6 HOH A 5 2016 5 HOH TIP . G 6 HOH A 6 2017 6 HOH TIP . G 6 HOH A 7 2018 7 HOH TIP . G 6 HOH A 8 2019 8 HOH TIP . G 6 HOH A 9 2020 9 HOH TIP . G 6 HOH A 10 2021 10 HOH TIP . G 6 HOH A 11 2022 11 HOH TIP . G 6 HOH A 12 2023 12 HOH TIP . G 6 HOH A 13 2024 13 HOH TIP . G 6 HOH A 14 2025 14 HOH TIP . G 6 HOH A 15 2026 16 HOH TIP . G 6 HOH A 16 2027 17 HOH TIP . G 6 HOH A 17 2028 18 HOH TIP . G 6 HOH A 18 2029 19 HOH TIP . G 6 HOH A 19 2030 20 HOH TIP . G 6 HOH A 20 2031 21 HOH TIP . G 6 HOH A 21 2032 22 HOH TIP . G 6 HOH A 22 2033 23 HOH TIP . G 6 HOH A 23 2034 24 HOH TIP . G 6 HOH A 24 2035 25 HOH TIP . G 6 HOH A 25 2036 26 HOH TIP . G 6 HOH A 26 2037 27 HOH TIP . G 6 HOH A 27 2038 28 HOH TIP . G 6 HOH A 28 2039 29 HOH TIP . G 6 HOH A 29 2040 30 HOH TIP . G 6 HOH A 30 2041 31 HOH TIP . G 6 HOH A 31 2042 33 HOH TIP . G 6 HOH A 32 2043 34 HOH TIP . G 6 HOH A 33 2044 35 HOH TIP . G 6 HOH A 34 2045 36 HOH TIP . G 6 HOH A 35 2046 37 HOH TIP . G 6 HOH A 36 2047 38 HOH TIP . G 6 HOH A 37 2048 40 HOH TIP . G 6 HOH A 38 2049 42 HOH TIP . G 6 HOH A 39 2050 43 HOH TIP . G 6 HOH A 40 2051 44 HOH TIP . G 6 HOH A 41 2052 45 HOH TIP . G 6 HOH A 42 2053 46 HOH TIP . G 6 HOH A 43 2054 48 HOH TIP . G 6 HOH A 44 2055 49 HOH TIP . G 6 HOH A 45 2056 50 HOH TIP . G 6 HOH A 46 2057 52 HOH TIP . G 6 HOH A 47 2058 54 HOH TIP . G 6 HOH A 48 2059 55 HOH TIP . G 6 HOH A 49 2060 56 HOH TIP . G 6 HOH A 50 2061 57 HOH TIP . G 6 HOH A 51 2062 59 HOH TIP . G 6 HOH A 52 2063 60 HOH TIP . G 6 HOH A 53 2064 61 HOH TIP . G 6 HOH A 54 2065 62 HOH TIP . G 6 HOH A 55 2066 64 HOH TIP . G 6 HOH A 56 2067 65 HOH TIP . G 6 HOH A 57 2068 66 HOH TIP . G 6 HOH A 58 2069 67 HOH TIP . G 6 HOH A 59 2070 68 HOH TIP . G 6 HOH A 60 2071 69 HOH TIP . G 6 HOH A 61 2072 70 HOH TIP . G 6 HOH A 62 2073 71 HOH TIP . G 6 HOH A 63 2074 72 HOH TIP . G 6 HOH A 64 2075 73 HOH TIP . G 6 HOH A 65 2076 74 HOH TIP . G 6 HOH A 66 2077 75 HOH TIP . G 6 HOH A 67 2078 76 HOH TIP . G 6 HOH A 68 2079 77 HOH TIP . G 6 HOH A 69 2080 78 HOH TIP . G 6 HOH A 70 2081 79 HOH TIP . G 6 HOH A 71 2082 80 HOH TIP . G 6 HOH A 72 2083 81 HOH TIP . G 6 HOH A 73 2084 82 HOH TIP . G 6 HOH A 74 2085 83 HOH TIP . G 6 HOH A 75 2086 84 HOH TIP . G 6 HOH A 76 2087 85 HOH TIP . G 6 HOH A 77 2088 88 HOH TIP . G 6 HOH A 78 2089 89 HOH TIP . G 6 HOH A 79 2090 91 HOH TIP . G 6 HOH A 80 2091 92 HOH TIP . G 6 HOH A 81 2092 93 HOH TIP . G 6 HOH A 82 2093 94 HOH TIP . G 6 HOH A 83 2094 98 HOH TIP . G 6 HOH A 84 2095 99 HOH TIP . G 6 HOH A 85 2096 100 HOH TIP . G 6 HOH A 86 2097 102 HOH TIP . G 6 HOH A 87 2098 103 HOH TIP . G 6 HOH A 88 2099 104 HOH TIP . G 6 HOH A 89 2100 105 HOH TIP . G 6 HOH A 90 2101 106 HOH TIP . G 6 HOH A 91 2102 109 HOH TIP . G 6 HOH A 92 2103 112 HOH TIP . G 6 HOH A 93 2104 113 HOH TIP . G 6 HOH A 94 2105 114 HOH TIP . G 6 HOH A 95 2106 115 HOH TIP . G 6 HOH A 96 2107 116 HOH TIP . G 6 HOH A 97 2108 117 HOH TIP . G 6 HOH A 98 2109 118 HOH TIP . G 6 HOH A 99 2110 119 HOH TIP . G 6 HOH A 100 2111 120 HOH TIP . G 6 HOH A 101 2112 121 HOH TIP . G 6 HOH A 102 2113 122 HOH TIP . G 6 HOH A 103 2114 123 HOH TIP . G 6 HOH A 104 2115 124 HOH TIP . G 6 HOH A 105 2116 126 HOH TIP . G 6 HOH A 106 2117 127 HOH TIP . G 6 HOH A 107 2118 131 HOH TIP . G 6 HOH A 108 2119 132 HOH TIP . G 6 HOH A 109 2120 133 HOH TIP . G 6 HOH A 110 2121 134 HOH TIP . G 6 HOH A 111 2122 135 HOH TIP . G 6 HOH A 112 2123 136 HOH TIP . G 6 HOH A 113 2124 137 HOH TIP . G 6 HOH A 114 2125 138 HOH TIP . G 6 HOH A 115 2126 139 HOH TIP . G 6 HOH A 116 2127 140 HOH TIP . G 6 HOH A 117 2128 141 HOH TIP . G 6 HOH A 118 2129 142 HOH TIP . G 6 HOH A 119 2130 144 HOH TIP . G 6 HOH A 120 2131 146 HOH TIP . G 6 HOH A 121 2132 147 HOH TIP . G 6 HOH A 122 2133 148 HOH TIP . G 6 HOH A 123 2134 149 HOH TIP . G 6 HOH A 124 2135 151 HOH TIP . G 6 HOH A 125 2136 155 HOH TIP . G 6 HOH A 126 2137 156 HOH TIP . G 6 HOH A 127 2138 157 HOH TIP . G 6 HOH A 128 2139 159 HOH TIP . G 6 HOH A 129 2140 160 HOH TIP . G 6 HOH A 130 2141 161 HOH TIP . G 6 HOH A 131 2142 162 HOH TIP . G 6 HOH A 132 2143 164 HOH TIP . G 6 HOH A 133 2144 165 HOH TIP . G 6 HOH A 134 2145 167 HOH TIP . G 6 HOH A 135 2146 168 HOH TIP . G 6 HOH A 136 2147 170 HOH TIP . G 6 HOH A 137 2148 171 HOH TIP . G 6 HOH A 138 2149 172 HOH TIP . G 6 HOH A 139 2150 173 HOH TIP . G 6 HOH A 140 2151 174 HOH TIP . G 6 HOH A 141 2152 175 HOH TIP . G 6 HOH A 142 2153 176 HOH TIP . G 6 HOH A 143 2154 177 HOH TIP . G 6 HOH A 144 2155 181 HOH TIP . G 6 HOH A 145 2156 182 HOH TIP . G 6 HOH A 146 2157 183 HOH TIP . G 6 HOH A 147 2158 184 HOH TIP . G 6 HOH A 148 2159 185 HOH TIP . G 6 HOH A 149 2160 187 HOH TIP . G 6 HOH A 150 2161 188 HOH TIP . G 6 HOH A 151 2162 189 HOH TIP . G 6 HOH A 152 2163 190 HOH TIP . G 6 HOH A 153 2164 192 HOH TIP . G 6 HOH A 154 2165 193 HOH TIP . G 6 HOH A 155 2166 194 HOH TIP . G 6 HOH A 156 2167 195 HOH TIP . G 6 HOH A 157 2168 196 HOH TIP . G 6 HOH A 158 2169 197 HOH TIP . G 6 HOH A 159 2170 198 HOH TIP . G 6 HOH A 160 2171 205 HOH TIP . G 6 HOH A 161 2172 206 HOH TIP . G 6 HOH A 162 2173 207 HOH TIP . G 6 HOH A 163 2174 208 HOH TIP . G 6 HOH A 164 2175 209 HOH TIP . G 6 HOH A 165 2176 210 HOH TIP . G 6 HOH A 166 2177 211 HOH TIP . G 6 HOH A 167 2178 212 HOH TIP . G 6 HOH A 168 2179 213 HOH TIP . G 6 HOH A 169 2180 214 HOH TIP . G 6 HOH A 170 2181 215 HOH TIP . G 6 HOH A 171 2182 216 HOH TIP . G 6 HOH A 172 2183 217 HOH TIP . G 6 HOH A 173 2184 218 HOH TIP . G 6 HOH A 174 2185 219 HOH TIP . G 6 HOH A 175 2186 220 HOH TIP . G 6 HOH A 176 2187 221 HOH TIP . G 6 HOH A 177 2188 222 HOH TIP . G 6 HOH A 178 2189 223 HOH TIP . G 6 HOH A 179 2190 224 HOH TIP . G 6 HOH A 180 2191 225 HOH TIP . G 6 HOH A 181 2192 226 HOH TIP . G 6 HOH A 182 2193 227 HOH TIP . G 6 HOH A 183 2194 228 HOH TIP . G 6 HOH A 184 2195 229 HOH TIP . G 6 HOH A 185 2196 230 HOH TIP . G 6 HOH A 186 2197 232 HOH TIP . G 6 HOH A 187 2198 233 HOH TIP . G 6 HOH A 188 2199 234 HOH TIP . G 6 HOH A 189 2200 235 HOH TIP . G 6 HOH A 190 2201 236 HOH TIP . G 6 HOH A 191 2202 237 HOH TIP . G 6 HOH A 192 2203 238 HOH TIP . G 6 HOH A 193 2204 239 HOH TIP . G 6 HOH A 194 2205 240 HOH TIP . G 6 HOH A 195 2206 241 HOH TIP . G 6 HOH A 196 2207 242 HOH TIP . G 6 HOH A 197 2208 243 HOH TIP . G 6 HOH A 198 2209 244 HOH TIP . G 6 HOH A 199 2210 245 HOH TIP . G 6 HOH A 200 2211 246 HOH TIP . G 6 HOH A 201 2212 247 HOH TIP . G 6 HOH A 202 2213 248 HOH TIP . G 6 HOH A 203 2214 249 HOH TIP . G 6 HOH A 204 2215 250 HOH TIP . G 6 HOH A 205 2216 251 HOH TIP . G 6 HOH A 206 2217 252 HOH TIP . G 6 HOH A 207 2218 253 HOH TIP . G 6 HOH A 208 2219 254 HOH TIP . G 6 HOH A 209 2220 255 HOH TIP . G 6 HOH A 210 2221 258 HOH TIP . G 6 HOH A 211 2222 259 HOH TIP . G 6 HOH A 212 2223 261 HOH TIP . G 6 HOH A 213 2224 262 HOH TIP . G 6 HOH A 214 2225 263 HOH TIP . G 6 HOH A 215 2226 265 HOH TIP . G 6 HOH A 216 2227 266 HOH TIP . G 6 HOH A 217 2228 267 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . F 5 -6.241 48.413 -6.607 1 53.25 ? C1 EDO 2011 A 1 HETATM 2 O O1 EDO . . . F 5 -6.174 47.463 -7.674 1 53.62 ? O1 EDO 2011 A 1 HETATM 3 C C2 EDO . . . F 5 -4.983 48.287 -5.746 1 65.16 ? C2 EDO 2011 A 1 HETATM 4 O O2 EDO . . . F 5 -4.886 46.956 -5.231 1 56.01 ? O2 EDO 2011 A 1 # _model_server_stats.io_time_ms 32 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #