data_2ZIO # _model_server_result.job_id LjveyVWumWj-goKpmnx30g _model_server_result.datetime_utc '2024-11-25 15:58:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2zio # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 2ZIO # _exptl.entry_id 2ZIO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 176.99 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IMIDODIPHOSPHORIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2ZIO _cell.length_a 104.15 _cell.length_b 104.15 _cell.length_c 71.06 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ZIO _symmetry.cell_setting ? _symmetry.Int_Tables_number 172 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 52.075 90.196546 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'H5 N O6 P2' _chem_comp.formula_weight 176.99 _chem_comp.id 2PN _chem_comp.mon_nstd_flag . _chem_comp.name 'IMIDODIPHOSPHORIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P1 O1 2PN doub 1 n n P1 O2 2PN sing 2 n n P1 O3 2PN sing 3 n n P1 N1 2PN sing 4 n n O2 HO2 2PN sing 5 n n O3 HO3 2PN sing 6 n n N1 P2 2PN sing 7 n n N1 HN1 2PN sing 8 n n P2 O4 2PN doub 9 n n P2 O5 2PN sing 10 n n P2 O6 2PN sing 11 n n O5 HO5 2PN sing 12 n n O6 HO6 2PN sing 13 n n # _atom_sites.entry_id 2ZIO _atom_sites.fract_transf_matrix[1][1] 0.009602 _atom_sites.fract_transf_matrix[1][2] 0.005543 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011087 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014073 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 2PN A 1 1 1 2PN 2PN . C 3 AYB A 1 601 601 AYB AYB . D 4 HOH A 1 604 604 HOH HOH . D 4 HOH A 2 605 605 HOH HOH . D 4 HOH A 3 606 606 HOH HOH . D 4 HOH A 4 607 607 HOH HOH . D 4 HOH A 5 608 608 HOH HOH . D 4 HOH A 6 609 609 HOH HOH . D 4 HOH A 7 610 610 HOH HOH . D 4 HOH A 8 611 611 HOH HOH . D 4 HOH A 9 612 612 HOH HOH . D 4 HOH A 10 613 613 HOH HOH . D 4 HOH A 11 614 614 HOH HOH . D 4 HOH A 12 615 615 HOH HOH . D 4 HOH A 13 616 616 HOH HOH . D 4 HOH A 14 617 617 HOH HOH . D 4 HOH A 15 618 618 HOH HOH . D 4 HOH A 16 619 619 HOH HOH . D 4 HOH A 17 620 620 HOH HOH . D 4 HOH A 18 621 621 HOH HOH . D 4 HOH A 19 622 622 HOH HOH . D 4 HOH A 20 623 623 HOH HOH . D 4 HOH A 21 624 624 HOH HOH . D 4 HOH A 22 625 625 HOH HOH . D 4 HOH A 23 626 626 HOH HOH . D 4 HOH A 24 627 627 HOH HOH . D 4 HOH A 25 628 628 HOH HOH . D 4 HOH A 26 629 629 HOH HOH . D 4 HOH A 27 630 630 HOH HOH . D 4 HOH A 28 631 631 HOH HOH . D 4 HOH A 29 632 632 HOH HOH . D 4 HOH A 30 633 633 HOH HOH . D 4 HOH A 31 634 634 HOH HOH . D 4 HOH A 32 635 635 HOH HOH . D 4 HOH A 33 636 636 HOH HOH . D 4 HOH A 34 637 637 HOH HOH . D 4 HOH A 35 638 638 HOH HOH . D 4 HOH A 36 639 639 HOH HOH . D 4 HOH A 37 640 640 HOH HOH . D 4 HOH A 38 641 641 HOH HOH . D 4 HOH A 39 642 642 HOH HOH . D 4 HOH A 40 643 643 HOH HOH . D 4 HOH A 41 644 644 HOH HOH . D 4 HOH A 42 645 645 HOH HOH . D 4 HOH A 43 646 646 HOH HOH . D 4 HOH A 44 647 647 HOH HOH . D 4 HOH A 45 648 648 HOH HOH . D 4 HOH A 46 649 649 HOH HOH . D 4 HOH A 47 650 650 HOH HOH . D 4 HOH A 48 651 651 HOH HOH . D 4 HOH A 49 652 652 HOH HOH . D 4 HOH A 50 653 653 HOH HOH . D 4 HOH A 51 654 654 HOH HOH . D 4 HOH A 52 655 655 HOH HOH . D 4 HOH A 53 656 656 HOH HOH . D 4 HOH A 54 657 657 HOH HOH . D 4 HOH A 55 658 658 HOH HOH . D 4 HOH A 56 659 659 HOH HOH . D 4 HOH A 57 660 660 HOH HOH . D 4 HOH A 58 661 661 HOH HOH . D 4 HOH A 59 662 662 HOH HOH . D 4 HOH A 60 663 663 HOH HOH . D 4 HOH A 61 664 664 HOH HOH . D 4 HOH A 62 665 665 HOH HOH . D 4 HOH A 63 666 666 HOH HOH . D 4 HOH A 64 667 667 HOH HOH . D 4 HOH A 65 668 668 HOH HOH . D 4 HOH A 66 669 669 HOH HOH . D 4 HOH A 67 670 670 HOH HOH . D 4 HOH A 68 671 671 HOH HOH . D 4 HOH A 69 672 672 HOH HOH . D 4 HOH A 70 673 673 HOH HOH . D 4 HOH A 71 674 674 HOH HOH . D 4 HOH A 72 675 675 HOH HOH . D 4 HOH A 73 676 676 HOH HOH . D 4 HOH A 74 677 677 HOH HOH . D 4 HOH A 75 678 678 HOH HOH . D 4 HOH A 76 679 679 HOH HOH . D 4 HOH A 77 680 680 HOH HOH . D 4 HOH A 78 681 681 HOH HOH . D 4 HOH A 79 682 682 HOH HOH . D 4 HOH A 80 683 683 HOH HOH . D 4 HOH A 81 684 684 HOH HOH . D 4 HOH A 82 685 685 HOH HOH . D 4 HOH A 83 686 686 HOH HOH . D 4 HOH A 84 687 687 HOH HOH . D 4 HOH A 85 688 688 HOH HOH . D 4 HOH A 86 689 689 HOH HOH . D 4 HOH A 87 690 690 HOH HOH . D 4 HOH A 88 691 691 HOH HOH . D 4 HOH A 89 692 692 HOH HOH . D 4 HOH A 90 693 693 HOH HOH . D 4 HOH A 91 694 694 HOH HOH . D 4 HOH A 92 695 695 HOH HOH . D 4 HOH A 93 696 696 HOH HOH . D 4 HOH A 94 697 697 HOH HOH . D 4 HOH A 95 698 698 HOH HOH . D 4 HOH A 96 699 699 HOH HOH . D 4 HOH A 97 700 700 HOH HOH . D 4 HOH A 98 701 701 HOH HOH . D 4 HOH A 99 702 702 HOH HOH . D 4 HOH A 100 703 703 HOH HOH . D 4 HOH A 101 704 704 HOH HOH . D 4 HOH A 102 705 705 HOH HOH . D 4 HOH A 103 706 706 HOH HOH . D 4 HOH A 104 707 707 HOH HOH . D 4 HOH A 105 708 708 HOH HOH . D 4 HOH A 106 709 709 HOH HOH . D 4 HOH A 107 710 710 HOH HOH . D 4 HOH A 108 711 711 HOH HOH . D 4 HOH A 109 712 712 HOH HOH . D 4 HOH A 110 713 713 HOH HOH . D 4 HOH A 111 714 714 HOH HOH . D 4 HOH A 112 715 715 HOH HOH . D 4 HOH A 113 716 716 HOH HOH . D 4 HOH A 114 717 717 HOH HOH . D 4 HOH A 115 718 718 HOH HOH . D 4 HOH A 116 719 719 HOH HOH . D 4 HOH A 117 720 720 HOH HOH . D 4 HOH A 118 721 721 HOH HOH . D 4 HOH A 119 722 722 HOH HOH . D 4 HOH A 120 723 723 HOH HOH . D 4 HOH A 121 724 724 HOH HOH . D 4 HOH A 122 725 725 HOH HOH . D 4 HOH A 123 726 726 HOH HOH . D 4 HOH A 124 727 727 HOH HOH . D 4 HOH A 125 728 728 HOH HOH . D 4 HOH A 126 729 729 HOH HOH . D 4 HOH A 127 730 730 HOH HOH . D 4 HOH A 128 731 731 HOH HOH . D 4 HOH A 129 732 732 HOH HOH . D 4 HOH A 130 733 733 HOH HOH . D 4 HOH A 131 734 734 HOH HOH . D 4 HOH A 132 735 735 HOH HOH . D 4 HOH A 133 736 736 HOH HOH . D 4 HOH A 134 737 737 HOH HOH . D 4 HOH A 135 738 738 HOH HOH . D 4 HOH A 136 739 739 HOH HOH . D 4 HOH A 137 740 740 HOH HOH . D 4 HOH A 138 741 741 HOH HOH . D 4 HOH A 139 742 742 HOH HOH . D 4 HOH A 140 743 743 HOH HOH . D 4 HOH A 141 744 744 HOH HOH . D 4 HOH A 142 745 745 HOH HOH . D 4 HOH A 143 746 746 HOH HOH . D 4 HOH A 144 747 747 HOH HOH . D 4 HOH A 145 748 748 HOH HOH . D 4 HOH A 146 749 749 HOH HOH . D 4 HOH A 147 750 750 HOH HOH . D 4 HOH A 148 751 751 HOH HOH . D 4 HOH A 149 752 752 HOH HOH . D 4 HOH A 150 753 753 HOH HOH . D 4 HOH A 151 754 754 HOH HOH . D 4 HOH A 152 755 755 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P1 2PN . . . B 2 8.96 31.024 6.031 1 151.66 ? P1 2PN 1 A 1 HETATM 2 O O1 2PN . . . B 2 9.085 30.07 7.321 1 150.24 ? O1 2PN 1 A 1 HETATM 3 O O2 2PN . . . B 2 7.443 31.561 6.017 1 154.21 ? O2 2PN 1 A 1 HETATM 4 O O3 2PN . . . B 2 9.303 30.309 4.781 1 150.21 ? O3 2PN 1 A 1 HETATM 5 N N1 2PN . . . B 2 9.905 32.312 6.317 1 151.39 ? N1 2PN 1 A 1 HETATM 6 P P2 2PN . . . B 2 9.1 33.437 7.166 1 150.8 ? P2 2PN 1 A 1 HETATM 7 O O4 2PN . . . B 2 8.259 32.66 8.297 1 152.33 ? O4 2PN 1 A 1 HETATM 8 O O5 2PN . . . B 2 10.228 34.288 7.938 1 151.14 ? O5 2PN 1 A 1 HETATM 9 O O6 2PN . . . B 2 8.245 34.289 6.309 1 149.44 ? O6 2PN 1 A 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 9 #