data_2ZIY # _model_server_result.job_id aQotpIEqDKcpKApK3mbDOQ _model_server_result.datetime_utc '2024-11-02 07:25:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ziy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":382}' # _entry.id 2ZIY # _exptl.entry_id 2ZIY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 256.424 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PALMITIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2ZIY _cell.length_a 84.319 _cell.length_b 108.746 _cell.length_c 142.165 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ZIY _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D 1 1 A,B,C,D 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 84.319 0 71.0825 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 107 A CYS 108 1_555 A SG CYS 185 A CYS 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? covale ? covale1 A NZ LYS 304 A LYS 305 1_555 B C15 RET . A RET 380 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.301 ? covale ? covale2 A SG CYS 335 A CYS 336 1_555 C C1 PLM . A PLM 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.863 ? covale ? covale3 A SG CYS 336 A CYS 337 1_555 D C1 PLM . A PLM 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.86 ? # _chem_comp.formula 'C16 H32 O2' _chem_comp.formula_weight 256.424 _chem_comp.id PLM _chem_comp.mon_nstd_flag . _chem_comp.name 'PALMITIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PLM sing 258 n n C1 O2 PLM doub 259 n n C1 C2 PLM sing 260 n n O1 H PLM sing 261 n n C2 C3 PLM sing 262 n n C2 H21 PLM sing 263 n n C2 H22 PLM sing 264 n n C3 C4 PLM sing 265 n n C3 H31 PLM sing 266 n n C3 H32 PLM sing 267 n n C4 C5 PLM sing 268 n n C4 H41 PLM sing 269 n n C4 H42 PLM sing 270 n n C5 C6 PLM sing 271 n n C5 H51 PLM sing 272 n n C5 H52 PLM sing 273 n n C6 C7 PLM sing 274 n n C6 H61 PLM sing 275 n n C6 H62 PLM sing 276 n n C7 C8 PLM sing 277 n n C7 H71 PLM sing 278 n n C7 H72 PLM sing 279 n n C8 C9 PLM sing 280 n n C8 H81 PLM sing 281 n n C8 H82 PLM sing 282 n n C9 CA PLM sing 283 n n C9 H91 PLM sing 284 n n C9 H92 PLM sing 285 n n CA CB PLM sing 286 n n CA HA1 PLM sing 287 n n CA HA2 PLM sing 288 n n CB CC PLM sing 289 n n CB HB1 PLM sing 290 n n CB HB2 PLM sing 291 n n CC CD PLM sing 292 n n CC HC1 PLM sing 293 n n CC HC2 PLM sing 294 n n CD CE PLM sing 295 n n CD HD1 PLM sing 296 n n CD HD2 PLM sing 297 n n CE CF PLM sing 298 n n CE HE1 PLM sing 299 n n CE HE2 PLM sing 300 n n CF CG PLM sing 301 n n CF HF1 PLM sing 302 n n CF HF2 PLM sing 303 n n CG HG1 PLM sing 304 n n CG HG2 PLM sing 305 n n CG HG3 PLM sing 306 n n # _atom_sites.entry_id 2ZIY _atom_sites.fract_transf_matrix[1][1] 0.01186 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009196 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007034 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 RET A 1 380 305 RET RET . C 3 PLM A 1 381 336 PLM PLY . D 3 PLM A 1 382 337 PLM PLY . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PLM . . . D 3 24.094 25.881 24.485 1 199.89 ? C1 PLM 382 A 1 HETATM 2 O O2 PLM . . . D 3 24.607 26.904 24.979 1 199.89 ? O2 PLM 382 A 1 HETATM 3 C C2 PLM . . . D 3 24.948 24.888 23.756 1 199.89 ? C2 PLM 382 A 1 HETATM 4 C C3 PLM . . . D 3 26.436 25.021 24.034 1 199.89 ? C3 PLM 382 A 1 HETATM 5 C C4 PLM . . . D 3 27.061 26.056 23.099 1 199.89 ? C4 PLM 382 A 1 HETATM 6 C C5 PLM . . . D 3 28.57 25.899 22.961 1 199.89 ? C5 PLM 382 A 1 HETATM 7 C C6 PLM . . . D 3 29.355 27 23.672 1 199.89 ? C6 PLM 382 A 1 HETATM 8 C C7 PLM . . . D 3 30.69 27.211 22.968 1 199.89 ? C7 PLM 382 A 1 HETATM 9 C C8 PLM . . . D 3 31.892 27.092 23.893 1 199.89 ? C8 PLM 382 A 1 HETATM 10 C C9 PLM . . . D 3 32.886 26.1 23.305 1 199.89 ? C9 PLM 382 A 1 HETATM 11 C CA PLM . . . D 3 34.324 26.545 23.505 1 199.89 ? CA PLM 382 A 1 HETATM 12 C CB PLM . . . D 3 35.192 26.159 22.308 1 199.89 ? CB PLM 382 A 1 HETATM 13 C CC PLM . . . D 3 35.224 27.237 21.221 1 199.89 ? CC PLM 382 A 1 HETATM 14 C CD PLM . . . D 3 36.608 27.912 21.139 1 199.89 ? CD PLM 382 A 1 HETATM 15 C CE PLM . . . D 3 36.938 28.387 19.711 1 199.89 ? CE PLM 382 A 1 HETATM 16 C CF PLM . . . D 3 37.927 27.432 19.035 1 199.89 ? CF PLM 382 A 1 HETATM 17 C CG PLM . . . D 3 37.575 27.15 17.581 1 199.89 ? CG PLM 382 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 17 #