data_2ZJG
#
_model_server_result.job_id            IJ2vQVTlm-EjbA0l40WcxQ 
_model_server_result.datetime_utc      '2024-12-04 12:14:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2zjg 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":503}' 
#
_entry.id    2ZJG 
#
_exptl.entry_id    2ZJG 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    9 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2ZJG 
_cell.length_a            91.09 
_cell.length_b            91.09 
_cell.length_c            233.05 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2ZJG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C GLY 239 A GLY 280 1_555 A N LLP 240 A LLP 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? 
covale ? covale2 A C LLP 240 A LLP 281 1_555 A N THR 241 A THR 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? 
covale ? covale3 B C GLY 239 B GLY 280 1_555 B N LLP 240 B LLP 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.315 ? 
covale ? covale4 B C LLP 240 B LLP 281 1_555 B N THR 241 B THR 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.315 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     2ZJG 
_atom_sites.fract_transf_matrix[1][1]    0.010978 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010978 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004291 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 GOL A 1 500 1 GOL GOL . 
D 2 GOL A 1 501 1 GOL GOL . 
E 2 GOL A 1 502 1 GOL GOL . 
F 2 GOL A 1 503 1 GOL GOL . 
G 2 GOL B 1 500 1 GOL GOL . 
H 2 GOL B 1 501 1 GOL GOL . 
I 2 GOL B 1 502 1 GOL GOL . 
J 2 GOL B 1 503 1 GOL GOL . 
K 2 GOL B 1 504 1 GOL GOL . 
L 3 HOH A 1 504 1 HOH HOH . 
L 3 HOH A 2 505 2 HOH HOH . 
L 3 HOH A 3 506 3 HOH HOH . 
L 3 HOH A 4 507 4 HOH HOH . 
L 3 HOH A 5 508 5 HOH HOH . 
L 3 HOH A 6 509 8 HOH HOH . 
L 3 HOH A 7 510 9 HOH HOH . 
L 3 HOH A 8 511 10 HOH HOH . 
L 3 HOH A 9 512 11 HOH HOH . 
L 3 HOH A 10 513 13 HOH HOH . 
L 3 HOH A 11 514 22 HOH HOH . 
L 3 HOH A 12 515 23 HOH HOH . 
L 3 HOH A 13 516 25 HOH HOH . 
L 3 HOH A 14 517 32 HOH HOH . 
L 3 HOH A 15 518 33 HOH HOH . 
L 3 HOH A 16 519 34 HOH HOH . 
L 3 HOH A 17 520 36 HOH HOH . 
L 3 HOH A 18 521 39 HOH HOH . 
L 3 HOH A 19 522 40 HOH HOH . 
L 3 HOH A 20 523 41 HOH HOH . 
L 3 HOH A 21 524 43 HOH HOH . 
L 3 HOH A 22 525 47 HOH HOH . 
L 3 HOH A 23 526 48 HOH HOH . 
L 3 HOH A 24 527 49 HOH HOH . 
L 3 HOH A 25 528 51 HOH HOH . 
L 3 HOH A 26 529 53 HOH HOH . 
L 3 HOH A 27 530 54 HOH HOH . 
L 3 HOH A 28 531 57 HOH HOH . 
L 3 HOH A 29 532 60 HOH HOH . 
L 3 HOH A 30 533 61 HOH HOH . 
L 3 HOH A 31 534 62 HOH HOH . 
L 3 HOH A 32 535 64 HOH HOH . 
L 3 HOH A 33 536 68 HOH HOH . 
L 3 HOH A 34 537 73 HOH HOH . 
L 3 HOH A 35 538 74 HOH HOH . 
L 3 HOH A 36 539 82 HOH HOH . 
L 3 HOH A 37 540 83 HOH HOH . 
L 3 HOH A 38 541 84 HOH HOH . 
L 3 HOH A 39 542 88 HOH HOH . 
L 3 HOH A 40 543 89 HOH HOH . 
L 3 HOH A 41 544 96 HOH HOH . 
L 3 HOH A 42 545 99 HOH HOH . 
L 3 HOH A 43 546 101 HOH HOH . 
L 3 HOH A 44 547 102 HOH HOH . 
M 3 HOH B 1 505 6 HOH HOH . 
M 3 HOH B 2 506 7 HOH HOH . 
M 3 HOH B 3 507 12 HOH HOH . 
M 3 HOH B 4 508 14 HOH HOH . 
M 3 HOH B 5 509 15 HOH HOH . 
M 3 HOH B 6 510 16 HOH HOH . 
M 3 HOH B 7 511 17 HOH HOH . 
M 3 HOH B 8 512 18 HOH HOH . 
M 3 HOH B 9 513 19 HOH HOH . 
M 3 HOH B 10 514 20 HOH HOH . 
M 3 HOH B 11 515 21 HOH HOH . 
M 3 HOH B 12 516 24 HOH HOH . 
M 3 HOH B 13 517 26 HOH HOH . 
M 3 HOH B 14 518 27 HOH HOH . 
M 3 HOH B 15 519 28 HOH HOH . 
M 3 HOH B 16 520 29 HOH HOH . 
M 3 HOH B 17 521 30 HOH HOH . 
M 3 HOH B 18 522 31 HOH HOH . 
M 3 HOH B 19 523 35 HOH HOH . 
M 3 HOH B 20 524 37 HOH HOH . 
M 3 HOH B 21 525 38 HOH HOH . 
M 3 HOH B 22 526 42 HOH HOH . 
M 3 HOH B 23 527 44 HOH HOH . 
M 3 HOH B 24 528 45 HOH HOH . 
M 3 HOH B 25 529 46 HOH HOH . 
M 3 HOH B 26 530 50 HOH HOH . 
M 3 HOH B 27 531 52 HOH HOH . 
M 3 HOH B 28 532 55 HOH HOH . 
M 3 HOH B 29 533 56 HOH HOH . 
M 3 HOH B 30 534 58 HOH HOH . 
M 3 HOH B 31 535 59 HOH HOH . 
M 3 HOH B 32 536 63 HOH HOH . 
M 3 HOH B 33 537 65 HOH HOH . 
M 3 HOH B 34 538 66 HOH HOH . 
M 3 HOH B 35 539 67 HOH HOH . 
M 3 HOH B 36 540 69 HOH HOH . 
M 3 HOH B 37 541 70 HOH HOH . 
M 3 HOH B 38 542 71 HOH HOH . 
M 3 HOH B 39 543 72 HOH HOH . 
M 3 HOH B 40 544 75 HOH HOH . 
M 3 HOH B 41 545 76 HOH HOH . 
M 3 HOH B 42 546 77 HOH HOH . 
M 3 HOH B 43 547 78 HOH HOH . 
M 3 HOH B 44 548 79 HOH HOH . 
M 3 HOH B 45 549 80 HOH HOH . 
M 3 HOH B 46 550 81 HOH HOH . 
M 3 HOH B 47 551 85 HOH HOH . 
M 3 HOH B 48 552 86 HOH HOH . 
M 3 HOH B 49 553 87 HOH HOH . 
M 3 HOH B 50 554 90 HOH HOH . 
M 3 HOH B 51 555 91 HOH HOH . 
M 3 HOH B 52 556 92 HOH HOH . 
M 3 HOH B 53 557 93 HOH HOH . 
M 3 HOH B 54 558 94 HOH HOH . 
M 3 HOH B 55 559 95 HOH HOH . 
M 3 HOH B 56 560 97 HOH HOH . 
M 3 HOH B 57 561 98 HOH HOH . 
M 3 HOH B 58 562 100 HOH HOH . 
M 3 HOH B 59 563 103 HOH HOH . 
M 3 HOH B 60 564 104 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . J 2 -22.13 29.21 8.543 1 39.13 ? C1 GOL 503 B 1 
HETATM 2 O O1 GOL . . . J 2 -21.277 29.944 9.381 1 40.42 ? O1 GOL 503 B 1 
HETATM 3 C C2 GOL . . . J 2 -21.16 28.263 7.947 1 41.29 ? C2 GOL 503 B 1 
HETATM 4 O O2 GOL . . . J 2 -20.741 27.439 9.033 1 38.13 ? O2 GOL 503 B 1 
HETATM 5 C C3 GOL . . . J 2 -20.129 29.222 7.279 1 46.85 ? C3 GOL 503 B 1 
HETATM 6 O O3 GOL . . . J 2 -18.71 29.018 7.437 1 52.64 ? O3 GOL 503 B 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           289 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           6 
#