data_2ZK2
#
_model_server_result.job_id            NIKAi-RTf2Co4SsF3WLHJg 
_model_server_result.datetime_utc      '2024-11-01 21:36:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2zk2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1}' 
#
_entry.id    2ZK2 
#
_exptl.entry_id    2ZK2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              307.323 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLUTATHIONE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          103.02 
_cell.angle_gamma         90 
_cell.entry_id            2ZK2 
_cell.length_a            93.381 
_cell.length_b            61.347 
_cell.length_c            118.687 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2ZK2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F 1 1 
A,C,D,E 2 1 
B,F 2 2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 3_455 x-1/2,y+1/2,z 1 0 0 0 1 0 0 0 1 -46.6905 30.6735 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 C SG2 GSH . A GSH 1 1_555 D C14 PTG . A PTG 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.772 ? 
covale ? covale2 A SG CYS 95 A CYS 285 1_555 D C8 PTG . A PTG 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.881 ? 
#
_chem_comp.formula           'C10 H17 N3 O6 S' 
_chem_comp.formula_weight    307.323 
_chem_comp.id                GSH 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLUTATHIONE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 CA1 GSH sing 129 n n 
N1 HN11 GSH sing 130 n n 
N1 HN12 GSH sing 131 n n 
CA1 C1 GSH sing 132 n n 
CA1 CB1 GSH sing 133 n n 
CA1 HA1 GSH sing 134 n n 
C1 O11 GSH doub 135 n n 
C1 O12 GSH sing 136 n n 
O12 H12 GSH sing 137 n n 
CB1 CG1 GSH sing 138 n n 
CB1 HB12 GSH sing 139 n n 
CB1 HB13 GSH sing 140 n n 
CG1 CD1 GSH sing 141 n n 
CG1 HG12 GSH sing 142 n n 
CG1 HG13 GSH sing 143 n n 
CD1 OE1 GSH doub 144 n n 
CD1 N2 GSH sing 145 n n 
N2 CA2 GSH sing 146 n n 
N2 HN2 GSH sing 147 n n 
CA2 C2 GSH sing 148 n n 
CA2 CB2 GSH sing 149 n n 
CA2 HA2 GSH sing 150 n n 
C2 O2 GSH doub 151 n n 
C2 N3 GSH sing 152 n n 
CB2 SG2 GSH sing 153 n n 
CB2 HB22 GSH sing 154 n n 
CB2 HB23 GSH sing 155 n n 
SG2 HSG GSH sing 156 n n 
N3 CA3 GSH sing 157 n n 
N3 HN3 GSH sing 158 n n 
CA3 C3 GSH sing 159 n n 
CA3 HA31 GSH sing 160 n n 
CA3 HA32 GSH sing 161 n n 
C3 O31 GSH doub 162 n n 
C3 O32 GSH sing 163 n n 
O32 H32 GSH sing 164 n n 
#
_atom_sites.entry_id                     2ZK2 
_atom_sites.fract_transf_matrix[1][1]    0.010709 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002476 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016301 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008648 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 GSH A 1 1 1 GSH GSH . 
D 3 PTG A 1 477 477 PTG PTG . 
E 4 HOH A 1 1003 1003 HOH HOH . 
E 4 HOH A 2 1005 1005 HOH HOH . 
E 4 HOH A 3 1006 1006 HOH HOH . 
E 4 HOH A 4 1009 1009 HOH HOH . 
E 4 HOH A 5 1010 1010 HOH HOH . 
E 4 HOH A 6 1011 1011 HOH HOH . 
E 4 HOH A 7 1013 1013 HOH HOH . 
E 4 HOH A 8 1015 1015 HOH HOH . 
E 4 HOH A 9 1017 1017 HOH HOH . 
E 4 HOH A 10 1018 1018 HOH HOH . 
E 4 HOH A 11 1019 1019 HOH HOH . 
E 4 HOH A 12 1020 1020 HOH HOH . 
E 4 HOH A 13 1022 1022 HOH HOH . 
E 4 HOH A 14 1024 1024 HOH HOH . 
E 4 HOH A 15 1025 1025 HOH HOH . 
E 4 HOH A 16 1027 1027 HOH HOH . 
E 4 HOH A 17 1028 1028 HOH HOH . 
E 4 HOH A 18 1029 1029 HOH HOH . 
E 4 HOH A 19 1032 1032 HOH HOH . 
E 4 HOH A 20 1033 1033 HOH HOH . 
E 4 HOH A 21 1036 1036 HOH HOH . 
E 4 HOH A 22 1038 1038 HOH HOH . 
E 4 HOH A 23 1040 1040 HOH HOH . 
E 4 HOH A 24 1042 1042 HOH HOH . 
E 4 HOH A 25 1046 1046 HOH HOH . 
E 4 HOH A 26 1048 1048 HOH HOH . 
E 4 HOH A 27 1049 1049 HOH HOH . 
E 4 HOH A 28 1051 1051 HOH HOH . 
E 4 HOH A 29 1053 1053 HOH HOH . 
E 4 HOH A 30 1054 1054 HOH HOH . 
E 4 HOH A 31 1056 1056 HOH HOH . 
E 4 HOH A 32 1057 1057 HOH HOH . 
E 4 HOH A 33 1058 1058 HOH HOH . 
E 4 HOH A 34 1060 1060 HOH HOH . 
E 4 HOH A 35 1061 1061 HOH HOH . 
E 4 HOH A 36 1062 1062 HOH HOH . 
E 4 HOH A 37 1063 1063 HOH HOH . 
E 4 HOH A 38 1064 1064 HOH HOH . 
E 4 HOH A 39 1066 1066 HOH HOH . 
E 4 HOH A 40 1067 1067 HOH HOH . 
E 4 HOH A 41 1069 1069 HOH HOH . 
E 4 HOH A 42 1070 1070 HOH HOH . 
E 4 HOH A 43 1071 1071 HOH HOH . 
E 4 HOH A 44 1072 1072 HOH HOH . 
E 4 HOH A 45 1074 1074 HOH HOH . 
E 4 HOH A 46 1075 1075 HOH HOH . 
E 4 HOH A 47 1076 1076 HOH HOH . 
E 4 HOH A 48 1078 1078 HOH HOH . 
E 4 HOH A 49 1079 1079 HOH HOH . 
E 4 HOH A 50 1080 1080 HOH HOH . 
E 4 HOH A 51 1081 1081 HOH HOH . 
E 4 HOH A 52 1084 1084 HOH HOH . 
E 4 HOH A 53 1086 1086 HOH HOH . 
E 4 HOH A 54 1087 1087 HOH HOH . 
F 4 HOH B 1 1001 1001 HOH HOH . 
F 4 HOH B 2 1002 1002 HOH HOH . 
F 4 HOH B 3 1004 1004 HOH HOH . 
F 4 HOH B 4 1007 1007 HOH HOH . 
F 4 HOH B 5 1008 1008 HOH HOH . 
F 4 HOH B 6 1012 1012 HOH HOH . 
F 4 HOH B 7 1016 1016 HOH HOH . 
F 4 HOH B 8 1021 1021 HOH HOH . 
F 4 HOH B 9 1023 1023 HOH HOH . 
F 4 HOH B 10 1026 1026 HOH HOH . 
F 4 HOH B 11 1030 1030 HOH HOH . 
F 4 HOH B 12 1031 1031 HOH HOH . 
F 4 HOH B 13 1034 1034 HOH HOH . 
F 4 HOH B 14 1037 1037 HOH HOH . 
F 4 HOH B 15 1039 1039 HOH HOH . 
F 4 HOH B 16 1041 1041 HOH HOH . 
F 4 HOH B 17 1043 1043 HOH HOH . 
F 4 HOH B 18 1045 1045 HOH HOH . 
F 4 HOH B 19 1047 1047 HOH HOH . 
F 4 HOH B 20 1050 1050 HOH HOH . 
F 4 HOH B 21 1052 1052 HOH HOH . 
F 4 HOH B 22 1055 1055 HOH HOH . 
F 4 HOH B 23 1059 1059 HOH HOH . 
F 4 HOH B 24 1065 1065 HOH HOH . 
F 4 HOH B 25 1068 1068 HOH HOH . 
F 4 HOH B 26 1073 1073 HOH HOH . 
F 4 HOH B 27 1077 1077 HOH HOH . 
F 4 HOH B 28 1082 1082 HOH HOH . 
F 4 HOH B 29 1083 1083 HOH HOH . 
F 4 HOH B 30 1085 1085 HOH HOH . 
F 4 HOH B 31 1088 1088 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 GSH . . . C 2 16.054 70.595 7.359 1 76.33 ? N1 GSH 1 A 1 
HETATM 2 C CA1 GSH . . . C 2 16.078 70.245 8.802 1 76.82 ? CA1 GSH 1 A 1 
HETATM 3 C C1 GSH . . . C 2 17.54 70.305 9.3 1 77.42 ? C1 GSH 1 A 1 
HETATM 4 O O11 GSH . . . C 2 18.177 69.226 9.45 1 77.65 ? O11 GSH 1 A 1 
HETATM 5 O O12 GSH . . . C 2 18.023 71.442 9.498 1 78.4 ? O12 GSH 1 A 1 
HETATM 6 C CB1 GSH . . . C 2 15.498 68.824 9.029 1 76.09 ? CB1 GSH 1 A 1 
HETATM 7 C CG1 GSH . . . C 2 14.043 68.533 8.554 1 75.37 ? CG1 GSH 1 A 1 
HETATM 8 C CD1 GSH . . . C 2 13.796 67.058 8.896 1 73.93 ? CD1 GSH 1 A 1 
HETATM 9 O OE1 GSH . . . C 2 14.616 66.244 8.43 1 75.17 ? OE1 GSH 1 A 1 
HETATM 10 N N2 GSH . . . C 2 12.646 66.654 9.527 1 72.83 ? N2 GSH 1 A 1 
HETATM 11 C CA2 GSH . . . C 2 12.517 65.181 9.859 1 70.91 ? CA2 GSH 1 A 1 
HETATM 12 C C2 GSH . . . C 2 11.191 64.695 10.476 1 70.23 ? C2 GSH 1 A 1 
HETATM 13 O O2 GSH . . . C 2 10.253 64.315 9.735 1 70.2 ? O2 GSH 1 A 1 
HETATM 14 C CB2 GSH . . . C 2 13.728 64.926 10.754 1 71.92 ? CB2 GSH 1 A 1 
HETATM 15 S SG2 GSH . . . C 2 14.917 63.779 9.997 1 74.22 ? SG2 GSH 1 A 1 
HETATM 16 N N3 GSH . . . C 2 11.158 64.716 11.817 1 67.92 ? N3 GSH 1 A 1 
HETATM 17 C CA3 GSH . . . C 2 9.996 64.299 12.642 1 65.07 ? CA3 GSH 1 A 1 
HETATM 18 C C3 GSH . . . C 2 9.765 65.388 13.684 1 63.9 ? C3 GSH 1 A 1 
HETATM 19 O O31 GSH . . . C 2 8.843 65.201 14.489 1 62.81 ? O31 GSH 1 A 1 
HETATM 20 O O32 GSH . . . C 2 10.535 66.396 13.652 1 64.49 ? O32 GSH 1 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           324 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           20 
#