data_2ZK4
#
_model_server_result.job_id            ZdSy5Q6KoLU27h9qGj4xFQ 
_model_server_result.datetime_utc      '2024-11-22 19:17:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2zk4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":2}' 
#
_entry.id    2ZK4 
#
_exptl.entry_id    2ZK4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              318.45 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(5E,8E,11Z,13E)-15-oxoicosa-5,8,11,13-tetraenoic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          102.85 
_cell.angle_gamma         90 
_cell.entry_id            2ZK4 
_cell.length_a            93.352 
_cell.length_b            61.174 
_cell.length_c            118.596 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2ZK4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F 1 1 
A,C,E 2 1 
B,D,F 2 2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 3_455 x-1/2,y+1/2,z 1 0 0 0 1 0 0 0 1 -46.676 30.587 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 C C9 OCR . A OCR 1 1_555 A SG CYS 95 A CYS 285 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.848 ? 
covale ? covale2 D C9 OCR . B OCR 2 1_555 B SG CYS 95 B CYS 285 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.836 ? 
#
_chem_comp.formula           'C20 H30 O3' 
_chem_comp.formula_weight    318.45 
_chem_comp.id                OCR 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(5E,8E,11Z,13E)-15-oxoicosa-5,8,11,13-tetraenoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '15-oxo-eicosatetraenoic acid' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 OCR sing 237 n n 
C2 C3 OCR sing 238 n n 
C3 C4 OCR sing 239 n n 
C4 C5 OCR sing 240 n n 
C5 C6 OCR sing 241 n n 
C6 O7 OCR doub 242 n n 
C6 C8 OCR sing 243 n n 
C8 C9 OCR doub 244 n n 
C9 C11 OCR sing 245 n n 
C11 C12 OCR doub 246 n n 
C12 C13 OCR sing 247 n n 
C13 C14 OCR sing 248 n n 
C14 C15 OCR doub 249 n n 
C15 C16 OCR sing 250 n n 
C16 C17 OCR sing 251 n n 
C17 C18 OCR doub 252 n n 
C18 C19 OCR sing 253 n n 
C19 C20 OCR sing 254 n n 
C20 C21 OCR sing 255 e n 
C21 C22 OCR sing 256 n n 
C22 O23 OCR sing 257 n n 
C22 O24 OCR doub 258 n n 
C1 H1 OCR sing 259 z n 
C1 H1A OCR sing 260 n n 
C1 H1B OCR sing 261 n n 
C2 H2 OCR sing 262 n n 
C2 H2A OCR sing 263 n n 
C3 H3 OCR sing 264 n n 
C3 H3A OCR sing 265 n n 
C4 H4 OCR sing 266 e n 
C4 H4A OCR sing 267 n n 
C5 H5 OCR sing 268 n n 
C5 H5A OCR sing 269 n n 
C8 H8 OCR sing 270 n n 
C9 H9 OCR sing 271 n n 
C11 H11 OCR sing 272 n n 
C12 H12 OCR sing 273 e n 
C13 H13 OCR sing 274 n n 
C13 H13A OCR sing 275 n n 
C14 H14 OCR sing 276 n n 
C15 H15 OCR sing 277 n n 
C16 H16 OCR sing 278 n n 
C16 H16A OCR sing 279 n n 
C17 H17 OCR sing 280 n n 
C18 H18 OCR sing 281 n n 
C19 H19 OCR sing 282 n n 
C19 H19A OCR sing 283 n n 
C20 H20 OCR sing 284 n n 
C20 H20A OCR sing 285 n n 
C21 H21 OCR sing 286 n n 
C21 H21A OCR sing 287 n n 
O23 HO23 OCR sing 288 n n 
#
_atom_sites.entry_id                     2ZK4 
_atom_sites.fract_transf_matrix[1][1]    0.010712 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002444 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016347 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008649 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 OCR A 1 1 1 OCR OCR . 
D 2 OCR B 1 2 2 OCR OCR . 
E 3 HOH A 1 1001 1001 HOH HOH . 
E 3 HOH A 2 1002 1002 HOH HOH . 
E 3 HOH A 3 1006 1006 HOH HOH . 
E 3 HOH A 4 1007 1007 HOH HOH . 
E 3 HOH A 5 1009 1009 HOH HOH . 
E 3 HOH A 6 1010 1010 HOH HOH . 
E 3 HOH A 7 1011 1011 HOH HOH . 
E 3 HOH A 8 1012 1012 HOH HOH . 
E 3 HOH A 9 1014 1014 HOH HOH . 
E 3 HOH A 10 1015 1015 HOH HOH . 
E 3 HOH A 11 1016 1016 HOH HOH . 
E 3 HOH A 12 1018 1018 HOH HOH . 
E 3 HOH A 13 1019 1019 HOH HOH . 
E 3 HOH A 14 1021 1021 HOH HOH . 
E 3 HOH A 15 1022 1022 HOH HOH . 
E 3 HOH A 16 1024 1024 HOH HOH . 
E 3 HOH A 17 1025 1025 HOH HOH . 
F 3 HOH B 1 1003 1003 HOH HOH . 
F 3 HOH B 2 1004 1004 HOH HOH . 
F 3 HOH B 3 1005 1005 HOH HOH . 
F 3 HOH B 4 1008 1008 HOH HOH . 
F 3 HOH B 5 1013 1013 HOH HOH . 
F 3 HOH B 6 1017 1017 HOH HOH . 
F 3 HOH B 7 1020 1020 HOH HOH . 
F 3 HOH B 8 1023 1023 HOH HOH . 
F 3 HOH B 9 1026 1026 HOH HOH . 
F 3 HOH B 10 1027 1027 HOH HOH . 
F 3 HOH B 11 1028 1028 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 OCR . . . D 2 41.876 37.153 44.662 1 66.43 ? C1 OCR 2 B 1 
HETATM 2 C C2 OCR . . . D 2 40.808 36.899 43.601 1 65.85 ? C2 OCR 2 B 1 
HETATM 3 C C3 OCR . . . D 2 39.607 37.782 43.864 1 66.12 ? C3 OCR 2 B 1 
HETATM 4 C C4 OCR . . . D 2 38.838 38.073 42.573 1 66.64 ? C4 OCR 2 B 1 
HETATM 5 C C5 OCR . . . D 2 37.497 38.741 42.914 1 67.9 ? C5 OCR 2 B 1 
HETATM 6 C C6 OCR . . . D 2 36.357 38.358 41.933 1 68.34 ? C6 OCR 2 B 1 
HETATM 7 O O7 OCR . . . D 2 35.794 37.246 41.997 1 68.62 ? O7 OCR 2 B 1 
HETATM 8 C C8 OCR . . . D 2 35.915 39.371 40.869 1 68.24 ? C8 OCR 2 B 1 
HETATM 9 C C9 OCR . . . D 2 36.703 39.197 39.549 1 67.63 ? C9 OCR 2 B 1 
HETATM 10 C C11 OCR . . . D 2 36.234 40.222 38.498 1 67.4 ? C11 OCR 2 B 1 
HETATM 11 C C12 OCR . . . D 2 35.561 39.962 37.356 1 66.19 ? C12 OCR 2 B 1 
HETATM 12 C C13 OCR . . . D 2 35.109 38.587 36.86 1 64.7 ? C13 OCR 2 B 1 
HETATM 13 C C14 OCR . . . D 2 36.304 37.682 36.634 1 63.41 ? C14 OCR 2 B 1 
HETATM 14 C C15 OCR . . . D 2 36.299 36.385 36.877 1 61.79 ? C15 OCR 2 B 1 
HETATM 15 C C16 OCR . . . D 2 35.119 35.582 37.397 1 61.1 ? C16 OCR 2 B 1 
HETATM 16 C C17 OCR . . . D 2 35.309 34.167 36.868 1 60.06 ? C17 OCR 2 B 1 
HETATM 17 C C18 OCR . . . D 2 34.423 33.188 36.94 1 60.95 ? C18 OCR 2 B 1 
HETATM 18 C C19 OCR . . . D 2 33.048 33.298 37.569 1 61.65 ? C19 OCR 2 B 1 
HETATM 19 C C20 OCR . . . D 2 32.65 31.963 38.264 1 62.1 ? C20 OCR 2 B 1 
HETATM 20 C C21 OCR . . . D 2 32.453 30.802 37.258 1 62.6 ? C21 OCR 2 B 1 
HETATM 21 C C22 OCR . . . D 2 32.204 29.445 37.973 1 63.37 ? C22 OCR 2 B 1 
HETATM 22 O O23 OCR . . . D 2 32.75 28.416 37.466 1 64.2 ? O23 OCR 2 B 1 
HETATM 23 O O24 OCR . . . D 2 31.473 29.444 39.002 1 61.71 ? O24 OCR 2 B 1 
#
_model_server_stats.io_time_ms              55 
_model_server_stats.parse_time_ms           127 
_model_server_stats.create_model_time_ms    69 
_model_server_stats.query_time_ms           312 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           23 
#