data_2ZKW # _model_server_result.job_id 4t7HncwpekDI6lvAw3hP-A _model_server_result.datetime_utc '2025-03-13 21:34:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2zkw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":402}' # _entry.id 2ZKW # _exptl.entry_id 2ZKW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.42 _cell.angle_gamma 90 _cell.entry_id 2ZKW _cell.length_a 48.616 _cell.length_b 46.233 _cell.length_c 52.818 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ZKW _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 63 A CYS 57 1_555 A SG CYS 152 A CYS 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? disulf ? disulf2 B SG CYS 63 B CYS 57 1_555 B SG CYS 152 B CYS 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? metalc ? metalc1 A ND1 HIS 52 A HIS 46 1_555 C CU CU1 . A CU1 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.941 ? metalc ? metalc2 A NE2 HIS 54 A HIS 48 1_555 C CU CU1 . A CU1 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? metalc ? metalc3 A ND1 HIS 69 A HIS 63 1_555 D ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc4 A ND1 HIS 77 A HIS 71 1_555 D ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.966 ? metalc ? metalc5 A ND1 HIS 86 A HIS 80 1_555 D ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.929 ? metalc ? metalc6 A OD1 ASP 89 A ASP 83 1_555 D ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc7 A OD2 ASP 89 A ASP 83 1_555 D ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.689 ? metalc ? metalc8 A NE2 HIS 126 A HIS 120 1_555 C CU CU1 . A CU1 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? metalc ? metalc9 B ND1 HIS 52 B HIS 46 1_555 E CU CU1 . B CU1 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc10 B NE2 HIS 54 B HIS 48 1_555 E CU CU1 . B CU1 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.932 ? metalc ? metalc11 B ND1 HIS 69 B HIS 63 1_555 F ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.96 ? metalc ? metalc12 B ND1 HIS 77 B HIS 71 1_555 F ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? metalc ? metalc13 B ND1 HIS 86 B HIS 80 1_555 F ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? metalc ? metalc14 B OD1 ASP 89 B ASP 83 1_555 F ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? metalc ? metalc15 B NE2 HIS 126 B HIS 120 1_555 E CU CU1 . B CU1 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2ZKW _atom_sites.fract_transf_matrix[1][1] 0.020569 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001588 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02163 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018989 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CU1 A 1 301 301 CU1 CU1 . D 3 ZN A 1 401 401 ZN ZN . E 2 CU1 B 1 302 302 CU1 CU1 . F 3 ZN B 1 402 402 ZN ZN . G 4 HOH A 1 402 3 HOH HOH . G 4 HOH A 2 403 6 HOH HOH . G 4 HOH A 3 404 7 HOH HOH . G 4 HOH A 4 405 8 HOH HOH . G 4 HOH A 5 406 10 HOH HOH . G 4 HOH A 6 407 14 HOH HOH . G 4 HOH A 7 408 15 HOH HOH . G 4 HOH A 8 409 16 HOH HOH . G 4 HOH A 9 410 17 HOH HOH . G 4 HOH A 10 411 18 HOH HOH . G 4 HOH A 11 412 20 HOH HOH . G 4 HOH A 12 413 21 HOH HOH . G 4 HOH A 13 414 23 HOH HOH . G 4 HOH A 14 415 24 HOH HOH . G 4 HOH A 15 416 33 HOH HOH . G 4 HOH A 16 417 35 HOH HOH . G 4 HOH A 17 418 36 HOH HOH . G 4 HOH A 18 419 40 HOH HOH . G 4 HOH A 19 420 42 HOH HOH . G 4 HOH A 20 421 44 HOH HOH . G 4 HOH A 21 422 45 HOH HOH . G 4 HOH A 22 423 46 HOH HOH . H 4 HOH B 1 403 1 HOH HOH . H 4 HOH B 2 404 2 HOH HOH . H 4 HOH B 3 405 4 HOH HOH . H 4 HOH B 4 406 5 HOH HOH . H 4 HOH B 5 407 9 HOH HOH . H 4 HOH B 6 408 11 HOH HOH . H 4 HOH B 7 409 12 HOH HOH . H 4 HOH B 8 410 13 HOH HOH . H 4 HOH B 9 411 19 HOH HOH . H 4 HOH B 10 412 22 HOH HOH . H 4 HOH B 11 413 25 HOH HOH . H 4 HOH B 12 414 26 HOH HOH . H 4 HOH B 13 415 27 HOH HOH . H 4 HOH B 14 416 28 HOH HOH . H 4 HOH B 15 417 29 HOH HOH . H 4 HOH B 16 418 30 HOH HOH . H 4 HOH B 17 419 31 HOH HOH . H 4 HOH B 18 420 32 HOH HOH . H 4 HOH B 19 421 34 HOH HOH . H 4 HOH B 20 422 37 HOH HOH . H 4 HOH B 21 423 38 HOH HOH . H 4 HOH B 22 424 39 HOH HOH . H 4 HOH B 23 425 41 HOH HOH . H 4 HOH B 24 426 43 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x -2.855 _atom_site.Cartn_y -0.761 _atom_site.Cartn_z 50.397 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 24.43 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 402 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 108 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #