data_2ZMD # _model_server_result.job_id n6Goy4ex-z_GR4rup-pOzA _model_server_result.datetime_utc '2024-11-28 18:04:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2zmd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":900}' # _entry.id 2ZMD # _exptl.entry_id 2ZMD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 220.226 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2,6-DIHYDROANTHRA/1,9-CD/PYRAZOL-6-ONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2ZMD _cell.length_a 70.6 _cell.length_b 105.17 _cell.length_c 111.97 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ZMD _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D 1 1 A,B,C,D 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_455 -x-1,-y,z -1 0 0 0 -1 0 0 0 1 -70.6 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H8 N2 O' _chem_comp.formula_weight 220.226 _chem_comp.id 537 _chem_comp.mon_nstd_flag . _chem_comp.name 2,6-DIHYDROANTHRA/1,9-CD/PYRAZOL-6-ONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 537 doub 1 n y C1 C6 537 sing 2 n y C1 HC1 537 sing 3 n n C2 C3 537 sing 4 n y C2 HC2 537 sing 5 n n C3 C4 537 doub 6 n y C3 C21 537 sing 7 n y C4 C5 537 sing 8 n y C4 C20 537 sing 9 n n C5 C6 537 doub 10 n y C5 HC5 537 sing 11 n n C6 HC6 537 sing 12 n n C11 C12 537 doub 13 n y C11 C16 537 sing 14 n y C11 C21 537 sing 15 n y C12 C13 537 sing 16 n y C12 N24 537 sing 17 n y C13 C14 537 doub 18 n y C13 H13 537 sing 19 n n C14 C15 537 sing 20 n y C14 H14 537 sing 21 n n C15 C16 537 doub 22 n y C15 H15 537 sing 23 n n C16 C20 537 sing 24 n n C20 O22 537 doub 25 n n C21 N23 537 doub 26 n y N23 N24 537 sing 27 n y N24 H24 537 sing 28 n n # _atom_sites.entry_id 2ZMD _atom_sites.fract_transf_matrix[1][1] 0.014164 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009508 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008931 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 537 A 1 900 900 537 537 . C 3 7PE A 1 1 1 7PE 7PE . D 4 HOH A 1 901 1 HOH HOH . D 4 HOH A 2 902 2 HOH HOH . D 4 HOH A 3 903 3 HOH HOH . D 4 HOH A 4 904 4 HOH HOH . D 4 HOH A 5 905 5 HOH HOH . D 4 HOH A 6 906 6 HOH HOH . D 4 HOH A 7 907 7 HOH HOH . D 4 HOH A 8 908 8 HOH HOH . D 4 HOH A 9 909 9 HOH HOH . D 4 HOH A 10 910 10 HOH HOH . D 4 HOH A 11 911 11 HOH HOH . D 4 HOH A 12 912 12 HOH HOH . D 4 HOH A 13 913 13 HOH HOH . D 4 HOH A 14 914 14 HOH HOH . D 4 HOH A 15 915 15 HOH HOH . D 4 HOH A 16 916 16 HOH HOH . D 4 HOH A 17 917 17 HOH HOH . D 4 HOH A 18 918 18 HOH HOH . D 4 HOH A 19 919 19 HOH HOH . D 4 HOH A 20 920 20 HOH HOH . D 4 HOH A 21 921 21 HOH HOH . D 4 HOH A 22 922 22 HOH HOH . D 4 HOH A 23 923 23 HOH HOH . D 4 HOH A 24 924 24 HOH HOH . D 4 HOH A 25 925 25 HOH HOH . D 4 HOH A 26 926 26 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 537 . . . B 2 -34.353 -15.219 -9.123 1 62.46 ? C1 537 900 A 1 HETATM 2 C C2 537 . . . B 2 -34.684 -16.545 -9.383 1 62.38 ? C2 537 900 A 1 HETATM 3 C C3 537 . . . B 2 -35.483 -16.854 -10.476 1 62.38 ? C3 537 900 A 1 HETATM 4 C C4 537 . . . B 2 -35.947 -15.832 -11.316 1 62.41 ? C4 537 900 A 1 HETATM 5 C C5 537 . . . B 2 -35.611 -14.506 -11.054 1 62.37 ? C5 537 900 A 1 HETATM 6 C C6 537 . . . B 2 -34.814 -14.201 -9.956 1 62.41 ? C6 537 900 A 1 HETATM 7 C C11 537 . . . B 2 -36.609 -18.535 -11.824 1 62.49 ? C11 537 900 A 1 HETATM 8 C C12 537 . . . B 2 -36.825 -19.882 -11.915 1 62.44 ? C12 537 900 A 1 HETATM 9 C C13 537 . . . B 2 -37.607 -20.364 -12.96 1 62.44 ? C13 537 900 A 1 HETATM 10 C C14 537 . . . B 2 -38.151 -19.46 -13.883 1 62.42 ? C14 537 900 A 1 HETATM 11 C C15 537 . . . B 2 -37.915 -18.086 -13.767 1 62.39 ? C15 537 900 A 1 HETATM 12 C C16 537 . . . B 2 -37.13 -17.62 -12.718 1 62.47 ? C16 537 900 A 1 HETATM 13 C C20 537 . . . B 2 -36.808 -16.183 -12.49 1 62.45 ? C20 537 900 A 1 HETATM 14 C C21 537 . . . B 2 -35.831 -18.173 -10.763 1 62.45 ? C21 537 900 A 1 HETATM 15 O O22 537 . . . B 2 -37.243 -15.303 -13.26 1 62.52 ? O22 537 900 A 1 HETATM 16 N N23 537 . . . B 2 -35.525 -19.333 -10.133 1 62.46 ? N23 537 900 A 1 HETATM 17 N N24 537 . . . B 2 -36.147 -20.395 -10.855 1 62.37 ? N24 537 900 A 1 # _model_server_stats.io_time_ms 112 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 443 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 17 #