data_2ZMI
#
_model_server_result.job_id            hnYbBaBnsyPfd4mLzp_Xig 
_model_server_result.datetime_utc      '2024-12-13 01:06:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2zmi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":424}' 
#
_entry.id    2ZMI 
#
_exptl.entry_id    2ZMI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          95.21 
_cell.angle_gamma         90 
_cell.entry_id            2ZMI 
_cell.length_a            155.222 
_cell.length_b            42.412 
_cell.length_c            41.955 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2ZMI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     2ZMI 
_atom_sites.fract_transf_matrix[1][1]    0.006442 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000587 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.023578 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.023934 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 TT2 A 1 1 1 TT2 TT2 . 
D 4 EDO A 1 424 424 EDO EDO . 
E 5 FMT A 1 425 425 FMT FMT . 
F 6 HOH A 1 426 426 HOH HOH . 
F 6 HOH A 2 427 427 HOH HOH . 
F 6 HOH A 3 428 428 HOH HOH . 
F 6 HOH A 4 429 429 HOH HOH . 
F 6 HOH A 5 430 430 HOH HOH . 
F 6 HOH A 6 431 431 HOH HOH . 
F 6 HOH A 7 432 432 HOH HOH . 
F 6 HOH A 8 433 433 HOH HOH . 
F 6 HOH A 9 434 434 HOH HOH . 
F 6 HOH A 10 435 435 HOH HOH . 
F 6 HOH A 11 436 436 HOH HOH . 
F 6 HOH A 12 437 437 HOH HOH . 
F 6 HOH A 13 438 438 HOH HOH . 
F 6 HOH A 14 439 439 HOH HOH . 
F 6 HOH A 15 440 440 HOH HOH . 
F 6 HOH A 16 441 441 HOH HOH . 
F 6 HOH A 17 442 442 HOH HOH . 
F 6 HOH A 18 443 443 HOH HOH . 
F 6 HOH A 19 444 444 HOH HOH . 
F 6 HOH A 20 445 445 HOH HOH . 
F 6 HOH A 21 446 446 HOH HOH . 
F 6 HOH A 22 447 447 HOH HOH . 
F 6 HOH A 23 448 448 HOH HOH . 
F 6 HOH A 24 449 449 HOH HOH . 
F 6 HOH A 25 450 450 HOH HOH . 
F 6 HOH A 26 451 451 HOH HOH . 
F 6 HOH A 27 452 452 HOH HOH . 
F 6 HOH A 28 453 453 HOH HOH . 
F 6 HOH A 29 454 454 HOH HOH . 
F 6 HOH A 30 455 455 HOH HOH . 
F 6 HOH A 31 456 456 HOH HOH . 
F 6 HOH A 32 457 457 HOH HOH . 
F 6 HOH A 33 458 458 HOH HOH . 
F 6 HOH A 34 459 459 HOH HOH . 
F 6 HOH A 35 460 460 HOH HOH . 
F 6 HOH A 36 461 461 HOH HOH . 
F 6 HOH A 37 462 462 HOH HOH . 
F 6 HOH A 38 463 463 HOH HOH . 
F 6 HOH A 39 464 464 HOH HOH . 
F 6 HOH A 40 465 465 HOH HOH . 
F 6 HOH A 41 466 466 HOH HOH . 
F 6 HOH A 42 467 467 HOH HOH . 
F 6 HOH A 43 468 468 HOH HOH . 
F 6 HOH A 44 469 469 HOH HOH . 
F 6 HOH A 45 470 470 HOH HOH . 
F 6 HOH A 46 471 471 HOH HOH . 
F 6 HOH A 47 472 472 HOH HOH . 
F 6 HOH A 48 473 473 HOH HOH . 
F 6 HOH A 49 474 474 HOH HOH . 
F 6 HOH A 50 475 475 HOH HOH . 
F 6 HOH A 51 476 476 HOH HOH . 
F 6 HOH A 52 477 477 HOH HOH . 
F 6 HOH A 53 478 478 HOH HOH . 
F 6 HOH A 54 479 479 HOH HOH . 
F 6 HOH A 55 480 480 HOH HOH . 
F 6 HOH A 56 481 481 HOH HOH . 
F 6 HOH A 57 482 482 HOH HOH . 
F 6 HOH A 58 483 483 HOH HOH . 
F 6 HOH A 59 484 484 HOH HOH . 
F 6 HOH A 60 485 485 HOH HOH . 
F 6 HOH A 61 486 486 HOH HOH . 
F 6 HOH A 62 487 487 HOH HOH . 
F 6 HOH A 63 488 488 HOH HOH . 
F 6 HOH A 64 489 489 HOH HOH . 
F 6 HOH A 65 490 490 HOH HOH . 
F 6 HOH A 66 491 491 HOH HOH . 
F 6 HOH A 67 492 492 HOH HOH . 
F 6 HOH A 68 493 493 HOH HOH . 
F 6 HOH A 69 494 494 HOH HOH . 
F 6 HOH A 70 495 495 HOH HOH . 
F 6 HOH A 71 496 496 HOH HOH . 
F 6 HOH A 72 497 497 HOH HOH . 
F 6 HOH A 73 498 498 HOH HOH . 
F 6 HOH A 74 499 499 HOH HOH . 
F 6 HOH A 75 500 500 HOH HOH . 
F 6 HOH A 76 501 501 HOH HOH . 
F 6 HOH A 77 502 502 HOH HOH . 
F 6 HOH A 78 503 503 HOH HOH . 
F 6 HOH A 79 504 504 HOH HOH . 
F 6 HOH A 80 505 505 HOH HOH . 
F 6 HOH A 81 506 506 HOH HOH . 
F 6 HOH A 82 507 507 HOH HOH . 
F 6 HOH A 83 508 508 HOH HOH . 
F 6 HOH A 84 509 509 HOH HOH . 
F 6 HOH A 85 510 510 HOH HOH . 
F 6 HOH A 86 511 511 HOH HOH . 
F 6 HOH A 87 512 512 HOH HOH . 
F 6 HOH A 88 513 513 HOH HOH . 
F 6 HOH A 89 514 514 HOH HOH . 
F 6 HOH A 90 515 515 HOH HOH . 
F 6 HOH A 91 516 516 HOH HOH . 
F 6 HOH A 92 517 517 HOH HOH . 
F 6 HOH A 93 518 518 HOH HOH . 
F 6 HOH A 94 519 519 HOH HOH . 
F 6 HOH A 95 520 520 HOH HOH . 
F 6 HOH A 96 521 521 HOH HOH . 
F 6 HOH A 97 522 522 HOH HOH . 
F 6 HOH A 98 523 523 HOH HOH . 
F 6 HOH A 99 524 524 HOH HOH . 
F 6 HOH A 100 525 525 HOH HOH . 
F 6 HOH A 101 526 526 HOH HOH . 
F 6 HOH A 102 527 527 HOH HOH . 
F 6 HOH A 103 528 528 HOH HOH . 
F 6 HOH A 104 529 529 HOH HOH . 
F 6 HOH A 105 530 530 HOH HOH . 
F 6 HOH A 106 531 531 HOH HOH . 
F 6 HOH A 107 532 532 HOH HOH . 
F 6 HOH A 108 533 533 HOH HOH . 
F 6 HOH A 109 534 534 HOH HOH . 
F 6 HOH A 110 535 535 HOH HOH . 
F 6 HOH A 111 536 536 HOH HOH . 
F 6 HOH A 112 537 537 HOH HOH . 
F 6 HOH A 113 538 538 HOH HOH . 
F 6 HOH A 114 539 539 HOH HOH . 
F 6 HOH A 115 540 540 HOH HOH . 
F 6 HOH A 116 541 541 HOH HOH . 
F 6 HOH A 117 542 542 HOH HOH . 
F 6 HOH A 118 543 543 HOH HOH . 
F 6 HOH A 119 544 544 HOH HOH . 
F 6 HOH A 120 545 545 HOH HOH . 
F 6 HOH A 121 546 546 HOH HOH . 
F 6 HOH A 122 547 547 HOH HOH . 
F 6 HOH A 123 548 548 HOH HOH . 
F 6 HOH A 124 549 549 HOH HOH . 
F 6 HOH A 125 550 550 HOH HOH . 
F 6 HOH A 126 551 551 HOH HOH . 
F 6 HOH A 127 552 552 HOH HOH . 
F 6 HOH A 128 553 553 HOH HOH . 
F 6 HOH A 129 554 554 HOH HOH . 
F 6 HOH A 130 555 555 HOH HOH . 
F 6 HOH A 131 556 556 HOH HOH . 
F 6 HOH A 132 557 557 HOH HOH . 
F 6 HOH A 133 558 558 HOH HOH . 
F 6 HOH A 134 559 559 HOH HOH . 
F 6 HOH A 135 560 560 HOH HOH . 
F 6 HOH A 136 561 561 HOH HOH . 
F 6 HOH A 137 562 562 HOH HOH . 
F 6 HOH A 138 563 563 HOH HOH . 
F 6 HOH A 139 564 564 HOH HOH . 
F 6 HOH A 140 565 565 HOH HOH . 
F 6 HOH A 141 566 566 HOH HOH . 
F 6 HOH A 142 567 567 HOH HOH . 
F 6 HOH A 143 568 568 HOH HOH . 
F 6 HOH A 144 569 569 HOH HOH . 
F 6 HOH A 145 570 570 HOH HOH . 
F 6 HOH A 146 571 571 HOH HOH . 
F 6 HOH A 147 572 572 HOH HOH . 
F 6 HOH A 148 573 573 HOH HOH . 
F 6 HOH A 149 574 574 HOH HOH . 
F 6 HOH A 150 575 575 HOH HOH . 
F 6 HOH A 151 576 576 HOH HOH . 
F 6 HOH A 152 577 577 HOH HOH . 
F 6 HOH A 153 578 578 HOH HOH . 
F 6 HOH A 154 579 579 HOH HOH . 
F 6 HOH A 155 580 580 HOH HOH . 
F 6 HOH A 156 581 581 HOH HOH . 
F 6 HOH A 157 582 582 HOH HOH . 
F 6 HOH A 158 583 583 HOH HOH . 
F 6 HOH A 159 584 584 HOH HOH . 
F 6 HOH A 160 585 585 HOH HOH . 
F 6 HOH A 161 586 586 HOH HOH . 
F 6 HOH A 162 587 587 HOH HOH . 
F 6 HOH A 163 588 588 HOH HOH . 
F 6 HOH A 164 589 589 HOH HOH . 
G 6 HOH C 1 66 66 HOH HOH . 
G 6 HOH C 2 95 95 HOH HOH . 
G 6 HOH C 3 134 134 HOH HOH . 
G 6 HOH C 4 162 162 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . D 4 -1.831 -8.399 20.049 0.5 39.36 ? C1 EDO 424 A 1 
HETATM 2 O O1 EDO . . . D 4 -1.505 -9.743 19.362 0.5 41.69 ? O1 EDO 424 A 1 
HETATM 3 C C2 EDO . . . D 4 -2.027 -8.207 21.445 0.5 39.6 ? C2 EDO 424 A 1 
HETATM 4 O O2 EDO . . . D 4 -2.331 -6.758 22.277 0.5 43.42 ? O2 EDO 424 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           278 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           4 
#