data_2ZN9 # _model_server_result.job_id T3S4JyAFYd5D4Z1LT7n1Uw _model_server_result.datetime_utc '2024-11-22 00:29:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2zn9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":2}' # _entry.id 2ZN9 # _exptl.entry_id 2ZN9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 546.646 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DODECAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2ZN9 _cell.length_a 72.024 _cell.length_b 72.024 _cell.length_c 91.663 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ZN9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M 1 1 A,C,D,E,F,G,L 2 1 B,H,I,J,K,M 2 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_565 -y,x+1,z+1/4 0 -1 0 1 0 0 0 0 1 0 72.024 22.91575 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id K _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C24 H50 O13' _chem_comp.formula_weight 546.646 _chem_comp.id 12P _chem_comp.mon_nstd_flag . _chem_comp.name 'DODECAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'POLYETHYLENE GLYCOL PEG400' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O37 C36 12P sing 1 n n O37 H37 12P sing 2 n n C36 C35 12P sing 3 n n C36 H361 12P sing 4 n n C36 H362 12P sing 5 n n C35 O34 12P sing 6 n n C35 H351 12P sing 7 n n C35 H352 12P sing 8 n n O34 C33 12P sing 9 n n C33 C32 12P sing 10 n n C33 H331 12P sing 11 n n C33 H332 12P sing 12 n n C32 O31 12P sing 13 n n C32 H321 12P sing 14 n n C32 H322 12P sing 15 n n O31 C30 12P sing 16 n n C30 C29 12P sing 17 n n C30 H301 12P sing 18 n n C30 H302 12P sing 19 n n C29 O28 12P sing 20 n n C29 H291 12P sing 21 n n C29 H292 12P sing 22 n n O28 C27 12P sing 23 n n C27 C26 12P sing 24 n n C27 H271 12P sing 25 n n C27 H272 12P sing 26 n n C26 O25 12P sing 27 n n C26 H261 12P sing 28 n n C26 H262 12P sing 29 n n O25 C24 12P sing 30 n n C24 C23 12P sing 31 n n C24 H241 12P sing 32 n n C24 H242 12P sing 33 n n C23 O22 12P sing 34 n n C23 H231 12P sing 35 n n C23 H232 12P sing 36 n n O22 C21 12P sing 37 n n C21 C20 12P sing 38 n n C21 H211 12P sing 39 n n C21 H212 12P sing 40 n n C20 O19 12P sing 41 n n C20 H201 12P sing 42 n n C20 H202 12P sing 43 n n O19 C18 12P sing 44 n n C18 C17 12P sing 45 n n C18 H181 12P sing 46 n n C18 H182 12P sing 47 n n C17 O16 12P sing 48 n n C17 H171 12P sing 49 n n C17 H172 12P sing 50 n n O16 C15 12P sing 51 n n C15 C14 12P sing 52 n n C15 H151 12P sing 53 n n C15 H152 12P sing 54 n n C14 O13 12P sing 55 n n C14 H141 12P sing 56 n n C14 H142 12P sing 57 n n O13 C12 12P sing 58 n n C12 C11 12P sing 59 n n C12 H121 12P sing 60 n n C12 H122 12P sing 61 n n C11 O10 12P sing 62 n n C11 H111 12P sing 63 n n C11 H112 12P sing 64 n n O10 C9 12P sing 65 n n C9 C8 12P sing 66 n n C9 H91 12P sing 67 n n C9 H92 12P sing 68 n n C8 O7 12P sing 69 n n C8 H81 12P sing 70 n n C8 H82 12P sing 71 n n O7 C6 12P sing 72 n n C6 C5 12P sing 73 n n C6 H61 12P sing 74 n n C6 H62 12P sing 75 n n C5 O4 12P sing 76 n n C5 H51 12P sing 77 n n C5 H52 12P sing 78 n n O4 C3 12P sing 79 n n C3 C2 12P sing 80 n n C3 H31 12P sing 81 n n C3 H32 12P sing 82 n n C2 O1 12P sing 83 n n C2 H21 12P sing 84 n n C2 H22 12P sing 85 n n O1 HO1 12P sing 86 n n # _atom_sites.entry_id 2ZN9 _atom_sites.fract_transf_matrix[1][1] 0.013884 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013884 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01091 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA A 1 901 901 CA CA . D 2 CA A 1 902 902 CA CA . E 2 CA A 1 903 903 CA CA . F 2 CA A 1 904 904 CA CA . G 3 2PE A 1 1 1 2PE 2PE . H 2 CA B 1 901 901 CA CA . I 2 CA B 1 902 902 CA CA . J 2 CA B 1 903 903 CA CA . K 4 12P B 1 2 2 12P 12P . L 5 HOH A 1 905 19 HOH HOH . L 5 HOH A 2 906 20 HOH HOH . L 5 HOH A 3 907 21 HOH HOH . L 5 HOH A 4 908 22 HOH HOH . L 5 HOH A 5 909 23 HOH HOH . L 5 HOH A 6 910 24 HOH HOH . L 5 HOH A 7 911 25 HOH HOH . L 5 HOH A 8 912 26 HOH HOH . L 5 HOH A 9 913 27 HOH HOH . L 5 HOH A 10 914 28 HOH HOH . L 5 HOH A 11 915 29 HOH HOH . L 5 HOH A 12 916 30 HOH HOH . L 5 HOH A 13 917 31 HOH HOH . L 5 HOH A 14 918 32 HOH HOH . L 5 HOH A 15 919 34 HOH HOH . L 5 HOH A 16 920 35 HOH HOH . L 5 HOH A 17 921 36 HOH HOH . L 5 HOH A 18 922 37 HOH HOH . L 5 HOH A 19 923 38 HOH HOH . L 5 HOH A 20 924 40 HOH HOH . L 5 HOH A 21 925 41 HOH HOH . L 5 HOH A 22 926 42 HOH HOH . L 5 HOH A 23 927 45 HOH HOH . L 5 HOH A 24 928 46 HOH HOH . M 5 HOH B 1 904 33 HOH HOH . M 5 HOH B 2 905 44 HOH HOH . M 5 HOH B 3 906 1 HOH HOH . M 5 HOH B 4 907 2 HOH HOH . M 5 HOH B 5 908 3 HOH HOH . M 5 HOH B 6 909 4 HOH HOH . M 5 HOH B 7 910 5 HOH HOH . M 5 HOH B 8 911 6 HOH HOH . M 5 HOH B 9 912 7 HOH HOH . M 5 HOH B 10 913 8 HOH HOH . M 5 HOH B 11 914 9 HOH HOH . M 5 HOH B 12 915 10 HOH HOH . M 5 HOH B 13 916 11 HOH HOH . M 5 HOH B 14 917 12 HOH HOH . M 5 HOH B 15 918 13 HOH HOH . M 5 HOH B 16 919 14 HOH HOH . M 5 HOH B 17 920 15 HOH HOH . M 5 HOH B 18 921 16 HOH HOH . M 5 HOH B 19 922 17 HOH HOH . M 5 HOH B 20 923 18 HOH HOH . M 5 HOH B 21 924 43 HOH HOH . M 5 HOH B 22 925 47 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O37 12P . . . K 4 -46.416 -0.289 -30.755 1 61.46 ? O37 12P 2 B 1 HETATM 2 C C36 12P . . . K 4 -47.344 0.083 -31.779 1 62.69 ? C36 12P 2 B 1 HETATM 3 C C35 12P . . . K 4 -48.197 1.273 -31.34 1 62.06 ? C35 12P 2 B 1 HETATM 4 O O34 12P . . . K 4 -49.218 0.843 -30.442 1 62.02 ? O34 12P 2 B 1 HETATM 5 C C33 12P . . . K 4 -49.556 1.866 -29.5 1 61.9 ? C33 12P 2 B 1 HETATM 6 C C32 12P . . . K 4 -50.868 1.556 -28.784 1 60.83 ? C32 12P 2 B 1 HETATM 7 O O31 12P . . . K 4 -50.961 0.167 -28.498 1 61.62 ? O31 12P 2 B 1 HETATM 8 C C30 12P . . . K 4 -51.464 -0.09 -27.188 1 60.78 ? C30 12P 2 B 1 HETATM 9 C C29 12P . . . K 4 -50.834 -1.349 -26.604 1 61.06 ? C29 12P 2 B 1 HETATM 10 O O28 12P . . . K 4 -51.268 -2.509 -27.311 1 62.14 ? O28 12P 2 B 1 HETATM 11 C C27 12P . . . K 4 -50.496 -3.656 -26.948 1 62.27 ? C27 12P 2 B 1 HETATM 12 C C26 12P . . . K 4 -49.867 -4.268 -28.195 1 63.05 ? C26 12P 2 B 1 HETATM 13 O O25 12P . . . K 4 -48.468 -4.478 -27.964 1 63.85 ? O25 12P 2 B 1 HETATM 14 C C24 12P . . . K 4 -47.908 -5.501 -28.796 1 61.7 ? C24 12P 2 B 1 HETATM 15 C C23 12P . . . K 4 -48.267 -6.883 -28.25 1 58.73 ? C23 12P 2 B 1 HETATM 16 O O22 12P . . . K 4 -47.904 -7.88 -29.203 1 54.78 ? O22 12P 2 B 1 HETATM 17 C C21 12P . . . K 4 -48.996 -8.681 -29.643 1 51.95 ? C21 12P 2 B 1 HETATM 18 C C20 12P . . . K 4 -49.679 -9.401 -28.491 1 49.81 ? C20 12P 2 B 1 HETATM 19 O O19 12P . . . K 4 -49.248 -10.754 -28.47 1 49.66 ? O19 12P 2 B 1 HETATM 20 C C18 12P . . . K 4 -49.855 -11.542 -27.455 1 47.27 ? C18 12P 2 B 1 HETATM 21 C C17 12P . . . K 4 -48.79 -11.975 -26.466 1 46.27 ? C17 12P 2 B 1 HETATM 22 O O16 12P . . . K 4 -49.354 -11.903 -25.15 1 46.85 ? O16 12P 2 B 1 HETATM 23 C C15 12P . . . K 4 -48.611 -11.072 -24.261 1 44.79 ? C15 12P 2 B 1 HETATM 24 C C14 12P . . . K 4 -48.874 -11.533 -22.839 1 44.39 ? C14 12P 2 B 1 HETATM 25 O O13 12P . . . K 4 -47.631 -11.648 -22.166 1 45.04 ? O13 12P 2 B 1 HETATM 26 C C12 12P . . . K 4 -47.716 -12.266 -20.882 1 47.73 ? C12 12P 2 B 1 HETATM 27 C C11 12P . . . K 4 -46.791 -13.476 -20.79 1 48.66 ? C11 12P 2 B 1 HETATM 28 O O10 12P . . . K 4 -47.43 -14.468 -19.984 1 51.1 ? O10 12P 2 B 1 HETATM 29 C C9 12P . . . K 4 -46.54 -15.519 -19.602 1 51.59 ? C9 12P 2 B 1 HETATM 30 C C8 12P . . . K 4 -47.29 -16.588 -18.821 1 52.16 ? C8 12P 2 B 1 HETATM 31 O O7 12P . . . K 4 -48.28 -15.951 -18.008 1 55.01 ? O7 12P 2 B 1 HETATM 32 C C6 12P . . . K 4 -48.606 -16.595 -16.765 1 55.24 ? C6 12P 2 B 1 HETATM 33 C C5 12P . . . K 4 -49.136 -18.005 -16.991 1 56.37 ? C5 12P 2 B 1 HETATM 34 O O4 12P . . . K 4 -50.276 -17.922 -17.838 1 58.13 ? O4 12P 2 B 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 34 #