data_2ZNN # _model_server_result.job_id QkDjwF9AANttggpYV1xkRg _model_server_result.datetime_utc '2024-11-24 08:53:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2znn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":901}' # _entry.id 2ZNN # _exptl.entry_id 2ZNN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 503.672 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-2-(4-propoxy-3-{[({4-[(3S,5S,7S)-tricyclo[3.3.1.1~3,7~]dec-1-yl]phenyl}carbonyl)amino]methyl}benzyl)butanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.29 _cell.angle_gamma 90 _cell.entry_id 2ZNN _cell.length_a 44.37 _cell.length_b 61.53 _cell.length_c 53.12 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ZNN _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C32 H41 N O4' _chem_comp.formula_weight 503.672 _chem_comp.id S44 _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-2-(4-propoxy-3-{[({4-[(3S,5S,7S)-tricyclo[3.3.1.1~3,7~]dec-1-yl]phenyl}carbonyl)amino]methyl}benzyl)butanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '(S)-2-{3-[(4-adamantan-1-ylbenzoylamino)methyl]-4-propoxybenzyl} butyric acid' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O33 C1 S44 sing 277 n n O34 C1 S44 doub 278 n n C1 C2 S44 sing 279 n n C2 C3 S44 sing 280 n n C2 C5 S44 sing 281 n n C3 C4 S44 sing 282 n n C5 C6 S44 sing 283 n n C6 C7 S44 doub 284 n y C6 C11 S44 sing 285 n y C7 C8 S44 sing 286 n y C8 C9 S44 doub 287 n y C8 C12 S44 sing 288 n n C9 C10 S44 sing 289 n y C9 O37 S44 sing 290 n n C10 C11 S44 doub 291 n y O37 C30 S44 sing 292 n n C30 C31 S44 sing 293 n n C31 C32 S44 sing 294 n n C12 N35 S44 sing 295 n n N35 C13 S44 sing 296 n n C13 O36 S44 doub 297 n n C13 C14 S44 sing 298 n n C14 C15 S44 doub 299 n y C14 C19 S44 sing 300 n y C15 C16 S44 sing 301 n y C16 C17 S44 doub 302 n y C17 C18 S44 sing 303 n y C17 C20 S44 sing 304 n n C18 C19 S44 doub 305 n y C20 C21 S44 sing 306 n n C20 C25 S44 sing 307 n n C20 C26 S44 sing 308 n n C21 C22 S44 sing 309 n n C22 C23 S44 sing 310 n n C22 C29 S44 sing 311 n n C23 C24 S44 sing 312 n n C24 C25 S44 sing 313 n n C24 C28 S44 sing 314 n n C26 C27 S44 sing 315 n n C27 C28 S44 sing 316 n n C27 C29 S44 sing 317 n n O33 HO33 S44 sing 318 n n C2 H2 S44 sing 319 n n C3 H3 S44 sing 320 n n C3 H3A S44 sing 321 n n C4 H4 S44 sing 322 n n C4 H4A S44 sing 323 n n C4 H4B S44 sing 324 n n C5 H5 S44 sing 325 n n C5 H5A S44 sing 326 n n C7 H7 S44 sing 327 n n C10 H10 S44 sing 328 n n C11 H11 S44 sing 329 n n C30 H30 S44 sing 330 n n C30 H30A S44 sing 331 n n C31 H31 S44 sing 332 n n C31 H31A S44 sing 333 n n C32 H32 S44 sing 334 n n C32 H32A S44 sing 335 n n C32 H32B S44 sing 336 n n C12 H12 S44 sing 337 n n C12 H12A S44 sing 338 n n N35 HN35 S44 sing 339 n n C15 H15 S44 sing 340 n n C16 H16 S44 sing 341 n n C18 H18 S44 sing 342 n n C19 H19 S44 sing 343 n n C21 H21 S44 sing 344 n n C21 H21A S44 sing 345 n n C22 H22 S44 sing 346 n n C23 H23 S44 sing 347 n n C23 H23A S44 sing 348 n n C24 H24 S44 sing 349 n n C25 H25 S44 sing 350 n n C25 H25A S44 sing 351 n n C26 H26 S44 sing 352 n n C26 H26A S44 sing 353 n n C27 H27 S44 sing 354 n n C28 H28 S44 sing 355 n n C28 H28A S44 sing 356 n n C29 H29 S44 sing 357 n n C29 H29A S44 sing 358 n n # _atom_sites.entry_id 2ZNN _atom_sites.fract_transf_matrix[1][1] 0.022538 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006586 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016252 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019613 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 S44 A 1 901 901 S44 703 . C 3 HOH A 1 1001 1001 HOH HOH . C 3 HOH A 2 1002 1002 HOH HOH . C 3 HOH A 3 1003 1003 HOH HOH . C 3 HOH A 4 1004 1004 HOH HOH . C 3 HOH A 5 1007 1007 HOH HOH . C 3 HOH A 6 1008 1008 HOH HOH . C 3 HOH A 7 1009 1009 HOH HOH . C 3 HOH A 8 1011 1011 HOH HOH . C 3 HOH A 9 1012 1012 HOH HOH . C 3 HOH A 10 1014 1014 HOH HOH . C 3 HOH A 11 1015 1015 HOH HOH . C 3 HOH A 12 1016 1016 HOH HOH . C 3 HOH A 13 1017 1017 HOH HOH . C 3 HOH A 14 1018 1018 HOH HOH . C 3 HOH A 15 1019 1019 HOH HOH . C 3 HOH A 16 1020 1020 HOH HOH . C 3 HOH A 17 1021 1021 HOH HOH . C 3 HOH A 18 1025 1025 HOH HOH . C 3 HOH A 19 1026 1026 HOH HOH . C 3 HOH A 20 1028 1028 HOH HOH . C 3 HOH A 21 1032 1032 HOH HOH . C 3 HOH A 22 1033 1033 HOH HOH . C 3 HOH A 23 1034 1034 HOH HOH . C 3 HOH A 24 1035 1035 HOH HOH . C 3 HOH A 25 1037 1037 HOH HOH . C 3 HOH A 26 1038 1038 HOH HOH . C 3 HOH A 27 1039 1039 HOH HOH . C 3 HOH A 28 1040 1040 HOH HOH . C 3 HOH A 29 1045 1045 HOH HOH . C 3 HOH A 30 1049 1049 HOH HOH . C 3 HOH A 31 1050 1050 HOH HOH . C 3 HOH A 32 1051 1051 HOH HOH . C 3 HOH A 33 1054 1054 HOH HOH . C 3 HOH A 34 1056 1056 HOH HOH . C 3 HOH A 35 1057 1057 HOH HOH . C 3 HOH A 36 1060 1060 HOH HOH . C 3 HOH A 37 1062 1062 HOH HOH . C 3 HOH A 38 1066 1066 HOH HOH . C 3 HOH A 39 1067 1067 HOH HOH . C 3 HOH A 40 1068 1068 HOH HOH . C 3 HOH A 41 1070 1070 HOH HOH . C 3 HOH A 42 1071 1071 HOH HOH . C 3 HOH A 43 1072 1072 HOH HOH . C 3 HOH A 44 1073 1073 HOH HOH . C 3 HOH A 45 1074 1074 HOH HOH . C 3 HOH A 46 1075 1075 HOH HOH . C 3 HOH A 47 1083 1083 HOH HOH . C 3 HOH A 48 1084 1084 HOH HOH . C 3 HOH A 49 1085 1085 HOH HOH . C 3 HOH A 50 1090 1090 HOH HOH . C 3 HOH A 51 1091 1091 HOH HOH . C 3 HOH A 52 1096 1096 HOH HOH . C 3 HOH A 53 1097 1097 HOH HOH . C 3 HOH A 54 1099 1099 HOH HOH . C 3 HOH A 55 1100 1100 HOH HOH . C 3 HOH A 56 1102 1102 HOH HOH . C 3 HOH A 57 1103 1103 HOH HOH . C 3 HOH A 58 1105 1105 HOH HOH . C 3 HOH A 59 1107 1107 HOH HOH . C 3 HOH A 60 1109 1109 HOH HOH . C 3 HOH A 61 1110 1110 HOH HOH . C 3 HOH A 62 1112 1112 HOH HOH . C 3 HOH A 63 1113 1113 HOH HOH . C 3 HOH A 64 1115 1115 HOH HOH . C 3 HOH A 65 1117 1117 HOH HOH . C 3 HOH A 66 1119 1119 HOH HOH . C 3 HOH A 67 1122 1122 HOH HOH . C 3 HOH A 68 1125 1125 HOH HOH . C 3 HOH A 69 1127 1127 HOH HOH . C 3 HOH A 70 1128 1128 HOH HOH . C 3 HOH A 71 1129 1129 HOH HOH . C 3 HOH A 72 1130 1130 HOH HOH . C 3 HOH A 73 1135 1135 HOH HOH . C 3 HOH A 74 1136 1136 HOH HOH . C 3 HOH A 75 1138 1138 HOH HOH . C 3 HOH A 76 1143 1143 HOH HOH . C 3 HOH A 77 1144 1144 HOH HOH . C 3 HOH A 78 1146 1146 HOH HOH . C 3 HOH A 79 1149 1149 HOH HOH . C 3 HOH A 80 1150 1150 HOH HOH . C 3 HOH A 81 1151 1151 HOH HOH . C 3 HOH A 82 1155 1155 HOH HOH . C 3 HOH A 83 1156 1156 HOH HOH . C 3 HOH A 84 1157 1157 HOH HOH . C 3 HOH A 85 1158 1158 HOH HOH . C 3 HOH A 86 1159 1159 HOH HOH . C 3 HOH A 87 1160 1160 HOH HOH . C 3 HOH A 88 1161 1161 HOH HOH . C 3 HOH A 89 1162 1162 HOH HOH . C 3 HOH A 90 1163 1163 HOH HOH . C 3 HOH A 91 1164 1164 HOH HOH . C 3 HOH A 92 1165 1165 HOH HOH . C 3 HOH A 93 1166 1166 HOH HOH . C 3 HOH A 94 1171 1171 HOH HOH . C 3 HOH A 95 1173 1173 HOH HOH . C 3 HOH A 96 1174 1174 HOH HOH . C 3 HOH A 97 1175 1175 HOH HOH . C 3 HOH A 98 1176 1176 HOH HOH . C 3 HOH A 99 1177 1177 HOH HOH . C 3 HOH A 100 1179 1179 HOH HOH . C 3 HOH A 101 1183 1183 HOH HOH . C 3 HOH A 102 1185 1185 HOH HOH . C 3 HOH A 103 1186 1186 HOH HOH . C 3 HOH A 104 1187 1187 HOH HOH . C 3 HOH A 105 1190 1190 HOH HOH . C 3 HOH A 106 1191 1191 HOH HOH . C 3 HOH A 107 1192 1192 HOH HOH . C 3 HOH A 108 1195 1195 HOH HOH . C 3 HOH A 109 1196 1196 HOH HOH . C 3 HOH A 110 1198 1198 HOH HOH . C 3 HOH A 111 1201 1201 HOH HOH . C 3 HOH A 112 1204 1204 HOH HOH . C 3 HOH A 113 1205 1205 HOH HOH . C 3 HOH A 114 1206 1206 HOH HOH . C 3 HOH A 115 1209 1209 HOH HOH . C 3 HOH A 116 1210 1210 HOH HOH . C 3 HOH A 117 1212 1212 HOH HOH . C 3 HOH A 118 1213 1213 HOH HOH . C 3 HOH A 119 1214 1214 HOH HOH . C 3 HOH A 120 1215 1215 HOH HOH . C 3 HOH A 121 1216 1216 HOH HOH . C 3 HOH A 122 1217 1217 HOH HOH . C 3 HOH A 123 1221 1221 HOH HOH . C 3 HOH A 124 1222 1222 HOH HOH . C 3 HOH A 125 1223 1223 HOH HOH . C 3 HOH A 126 1224 1224 HOH HOH . C 3 HOH A 127 1225 1225 HOH HOH . C 3 HOH A 128 1227 1227 HOH HOH . C 3 HOH A 129 1228 1228 HOH HOH . C 3 HOH A 130 1229 1229 HOH HOH . C 3 HOH A 131 1230 1230 HOH HOH . C 3 HOH A 132 1231 1231 HOH HOH . C 3 HOH A 133 1235 1235 HOH HOH . C 3 HOH A 134 1239 1239 HOH HOH . C 3 HOH A 135 1241 1241 HOH HOH . C 3 HOH A 136 1243 1243 HOH HOH . C 3 HOH A 137 1246 1246 HOH HOH . C 3 HOH A 138 1247 1247 HOH HOH . C 3 HOH A 139 1248 1248 HOH HOH . C 3 HOH A 140 1249 1249 HOH HOH . C 3 HOH A 141 1256 1256 HOH HOH . C 3 HOH A 142 1260 1260 HOH HOH . C 3 HOH A 143 1261 1261 HOH HOH . C 3 HOH A 144 1272 1272 HOH HOH . C 3 HOH A 145 1276 1276 HOH HOH . C 3 HOH A 146 1283 1283 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O33 S44 . . . B 2 14.492 3.199 -0.721 1 24.13 ? O33 S44 901 A 1 HETATM 2 O O34 S44 . . . B 2 15.288 1.121 -0.94 1 24.98 ? O34 S44 901 A 1 HETATM 3 C C1 S44 . . . B 2 14.62 2.05 -1.384 1 24.84 ? C1 S44 901 A 1 HETATM 4 C C2 S44 . . . B 2 13.917 2.079 -2.578 1 24.16 ? C2 S44 901 A 1 HETATM 5 C C3 S44 . . . B 2 14.777 1.512 -3.724 1 24.08 ? C3 S44 901 A 1 HETATM 6 C C4 S44 . . . B 2 16.035 2.326 -3.933 1 26.85 ? C4 S44 901 A 1 HETATM 7 C C5 S44 . . . B 2 12.628 1.27 -2.39 1 23.95 ? C5 S44 901 A 1 HETATM 8 C C6 S44 . . . B 2 11.738 1.293 -3.609 1 25.38 ? C6 S44 901 A 1 HETATM 9 C C7 S44 . . . B 2 10.937 2.452 -3.921 1 25.78 ? C7 S44 901 A 1 HETATM 10 C C8 S44 . . . B 2 10.083 2.468 -5.088 1 26.21 ? C8 S44 901 A 1 HETATM 11 C C9 S44 . . . B 2 10.031 1.303 -5.962 1 29.36 ? C9 S44 901 A 1 HETATM 12 C C10 S44 . . . B 2 10.847 0.136 -5.636 1 29.51 ? C10 S44 901 A 1 HETATM 13 C C11 S44 . . . B 2 11.686 0.135 -4.472 1 27.96 ? C11 S44 901 A 1 HETATM 14 O O37 S44 . . . B 2 9.206 1.308 -7.096 1 30.81 ? O37 S44 901 A 1 HETATM 15 C C30 S44 . . . B 2 8.393 0.129 -7.172 1 31.7 ? C30 S44 901 A 1 HETATM 16 C C31 S44 . . . B 2 8.744 -0.646 -8.414 1 32.75 ? C31 S44 901 A 1 HETATM 17 C C32 S44 . . . B 2 7.925 -1.909 -8.443 1 31.66 ? C32 S44 901 A 1 HETATM 18 C C12 S44 . . . B 2 9.28 3.652 -5.364 1 23.42 ? C12 S44 901 A 1 HETATM 19 N N35 S44 . . . B 2 9.687 4.351 -6.565 1 22.45 ? N35 S44 901 A 1 HETATM 20 C C13 S44 . . . B 2 9.042 5.54 -6.832 1 25.49 ? C13 S44 901 A 1 HETATM 21 O O36 S44 . . . B 2 8.155 6.006 -6.098 1 23.86 ? O36 S44 901 A 1 HETATM 22 C C14 S44 . . . B 2 9.431 6.192 -7.992 1 26.3 ? C14 S44 901 A 1 HETATM 23 C C15 S44 . . . B 2 9.55 7.628 -7.971 1 28.44 ? C15 S44 901 A 1 HETATM 24 C C16 S44 . . . B 2 9.917 8.36 -9.149 1 29.95 ? C16 S44 901 A 1 HETATM 25 C C17 S44 . . . B 2 10.176 7.669 -10.398 1 30.39 ? C17 S44 901 A 1 HETATM 26 C C18 S44 . . . B 2 10.064 6.207 -10.423 1 28.77 ? C18 S44 901 A 1 HETATM 27 C C19 S44 . . . B 2 9.693 5.475 -9.225 1 26.35 ? C19 S44 901 A 1 HETATM 28 C C20 S44 . . . B 2 10.54 8.459 -11.66 1 31.4 ? C20 S44 901 A 1 HETATM 29 C C21 S44 . . . B 2 9.427 8.243 -12.721 1 31.89 ? C21 S44 901 A 1 HETATM 30 C C22 S44 . . . B 2 9.752 9.034 -14.013 1 32.68 ? C22 S44 901 A 1 HETATM 31 C C23 S44 . . . B 2 11.105 8.553 -14.584 1 32.8 ? C23 S44 901 A 1 HETATM 32 C C24 S44 . . . B 2 12.222 8.78 -13.538 1 33 ? C24 S44 901 A 1 HETATM 33 C C25 S44 . . . B 2 11.891 7.979 -12.251 1 32.69 ? C25 S44 901 A 1 HETATM 34 C C26 S44 . . . B 2 10.607 9.991 -11.362 1 32.07 ? C26 S44 901 A 1 HETATM 35 C C27 S44 . . . B 2 10.949 10.779 -12.644 1 32.14 ? C27 S44 901 A 1 HETATM 36 C C28 S44 . . . B 2 12.307 10.293 -13.209 1 32.55 ? C28 S44 901 A 1 HETATM 37 C C29 S44 . . . B 2 9.831 10.541 -13.68 1 31.97 ? C29 S44 901 A 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 37 #