data_2ZNU # _model_server_result.job_id Si004BjFwAsdBdVojIsrwA _model_server_result.datetime_utc '2024-11-25 07:45:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2znu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 2ZNU # _exptl.entry_id 2ZNU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 291.255 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R,3aR,6R,7R,7aR)-2-[(2S)-2-amino-2-carboxyethyl]-6,7-dihydroxyhexahydro-2H-furo[3,2-b]pyran-2-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.29 _cell.angle_gamma 90 _cell.entry_id 2ZNU _cell.length_a 118.886 _cell.length_b 64.99 _cell.length_c 50.232 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ZNU _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C11 H17 N O8' _chem_comp.formula_weight 291.255 _chem_comp.id NDZ _chem_comp.mon_nstd_flag . _chem_comp.name '(2R,3aR,6R,7R,7aR)-2-[(2S)-2-amino-2-carboxyethyl]-6,7-dihydroxyhexahydro-2H-furo[3,2-b]pyran-2-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O C NDZ doub 246 n n C OXT NDZ sing 247 n n C CA NDZ sing 248 n n CA N NDZ sing 249 n n CA CB NDZ sing 250 n n CB CAJ NDZ sing 251 n n CAJ CAD NDZ sing 252 n n CAJ CAR NDZ sing 253 n n CAJ OAI NDZ sing 254 n n CAD OAA NDZ doub 255 n n CAD OAE NDZ sing 256 n n CAR CAQ NDZ sing 257 n n OAI CAH NDZ sing 258 n n CAH CAQ NDZ sing 259 n n CAH CAG NDZ sing 260 n n CAQ OAP NDZ sing 261 n n OAP CAO NDZ sing 262 n n CAO CAF NDZ sing 263 n n CAF OAB NDZ sing 264 n n CAF CAG NDZ sing 265 n n CAG OAC NDZ sing 266 n n OXT HOXT NDZ sing 267 n n CA HA NDZ sing 268 n n N HN NDZ sing 269 n n N HNA NDZ sing 270 n n CB HB NDZ sing 271 n n CB HBA NDZ sing 272 n n OAE HOAE NDZ sing 273 n n CAR HAR NDZ sing 274 n n CAR HARA NDZ sing 275 n n CAH HAH NDZ sing 276 n n CAQ HAQ NDZ sing 277 n n CAO HAO NDZ sing 278 n n CAO HAOA NDZ sing 279 n n CAF HAF NDZ sing 280 n n OAB HOAB NDZ sing 281 n n CAG HAG NDZ sing 282 n n OAC HOAC NDZ sing 283 n n # _atom_sites.entry_id 2ZNU _atom_sites.fract_transf_matrix[1][1] 0.008411 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002618 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015387 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02085 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NDZ A 1 1 1 NDZ NDH . C 3 BME A 1 791 1 BME BME . D 3 BME A 1 2 2 BME BME . E 3 BME A 1 3 3 BME BME . F 3 BME A 1 4 4 BME BME . G 4 HOH A 1 792 1 HOH HOH . G 4 HOH A 2 793 2 HOH HOH . G 4 HOH A 3 794 3 HOH HOH . G 4 HOH A 4 795 4 HOH HOH . G 4 HOH A 5 796 5 HOH HOH . G 4 HOH A 6 797 6 HOH HOH . G 4 HOH A 7 798 7 HOH HOH . G 4 HOH A 8 799 8 HOH HOH . G 4 HOH A 9 800 9 HOH HOH . G 4 HOH A 10 801 10 HOH HOH . G 4 HOH A 11 802 11 HOH HOH . G 4 HOH A 12 803 12 HOH HOH . G 4 HOH A 13 804 13 HOH HOH . G 4 HOH A 14 805 14 HOH HOH . G 4 HOH A 15 806 15 HOH HOH . G 4 HOH A 16 807 16 HOH HOH . G 4 HOH A 17 808 17 HOH HOH . G 4 HOH A 18 809 18 HOH HOH . G 4 HOH A 19 810 19 HOH HOH . G 4 HOH A 20 811 20 HOH HOH . G 4 HOH A 21 812 21 HOH HOH . G 4 HOH A 22 813 22 HOH HOH . G 4 HOH A 23 814 23 HOH HOH . G 4 HOH A 24 815 24 HOH HOH . G 4 HOH A 25 816 25 HOH HOH . G 4 HOH A 26 817 26 HOH HOH . G 4 HOH A 27 818 27 HOH HOH . G 4 HOH A 28 819 28 HOH HOH . G 4 HOH A 29 820 29 HOH HOH . G 4 HOH A 30 821 30 HOH HOH . G 4 HOH A 31 822 31 HOH HOH . G 4 HOH A 32 823 32 HOH HOH . G 4 HOH A 33 824 33 HOH HOH . G 4 HOH A 34 825 34 HOH HOH . G 4 HOH A 35 826 35 HOH HOH . G 4 HOH A 36 827 36 HOH HOH . G 4 HOH A 37 828 37 HOH HOH . G 4 HOH A 38 829 38 HOH HOH . G 4 HOH A 39 830 39 HOH HOH . G 4 HOH A 40 831 40 HOH HOH . G 4 HOH A 41 832 41 HOH HOH . G 4 HOH A 42 833 42 HOH HOH . G 4 HOH A 43 834 43 HOH HOH . G 4 HOH A 44 835 44 HOH HOH . G 4 HOH A 45 836 45 HOH HOH . G 4 HOH A 46 837 46 HOH HOH . G 4 HOH A 47 838 47 HOH HOH . G 4 HOH A 48 839 48 HOH HOH . G 4 HOH A 49 840 49 HOH HOH . G 4 HOH A 50 841 50 HOH HOH . G 4 HOH A 51 842 51 HOH HOH . G 4 HOH A 52 843 52 HOH HOH . G 4 HOH A 53 844 53 HOH HOH . G 4 HOH A 54 845 54 HOH HOH . G 4 HOH A 55 846 55 HOH HOH . G 4 HOH A 56 847 56 HOH HOH . G 4 HOH A 57 848 57 HOH HOH . G 4 HOH A 58 849 58 HOH HOH . G 4 HOH A 59 850 59 HOH HOH . G 4 HOH A 60 851 60 HOH HOH . G 4 HOH A 61 852 61 HOH HOH . G 4 HOH A 62 853 62 HOH HOH . G 4 HOH A 63 854 63 HOH HOH . G 4 HOH A 64 855 64 HOH HOH . G 4 HOH A 65 856 65 HOH HOH . G 4 HOH A 66 857 66 HOH HOH . G 4 HOH A 67 858 67 HOH HOH . G 4 HOH A 68 859 68 HOH HOH . G 4 HOH A 69 860 69 HOH HOH . G 4 HOH A 70 861 70 HOH HOH . G 4 HOH A 71 862 71 HOH HOH . G 4 HOH A 72 863 72 HOH HOH . G 4 HOH A 73 864 73 HOH HOH . G 4 HOH A 74 865 74 HOH HOH . G 4 HOH A 75 866 75 HOH HOH . G 4 HOH A 76 867 76 HOH HOH . G 4 HOH A 77 868 77 HOH HOH . G 4 HOH A 78 869 78 HOH HOH . G 4 HOH A 79 870 79 HOH HOH . G 4 HOH A 80 871 80 HOH HOH . G 4 HOH A 81 872 81 HOH HOH . G 4 HOH A 82 873 82 HOH HOH . G 4 HOH A 83 874 83 HOH HOH . G 4 HOH A 84 875 84 HOH HOH . G 4 HOH A 85 876 85 HOH HOH . G 4 HOH A 86 877 86 HOH HOH . G 4 HOH A 87 878 87 HOH HOH . G 4 HOH A 88 879 88 HOH HOH . G 4 HOH A 89 880 89 HOH HOH . G 4 HOH A 90 881 90 HOH HOH . G 4 HOH A 91 882 91 HOH HOH . G 4 HOH A 92 883 92 HOH HOH . G 4 HOH A 93 884 93 HOH HOH . G 4 HOH A 94 885 94 HOH HOH . G 4 HOH A 95 886 95 HOH HOH . G 4 HOH A 96 887 96 HOH HOH . G 4 HOH A 97 888 97 HOH HOH . G 4 HOH A 98 889 98 HOH HOH . G 4 HOH A 99 890 99 HOH HOH . G 4 HOH A 100 891 100 HOH HOH . G 4 HOH A 101 892 101 HOH HOH . G 4 HOH A 102 893 102 HOH HOH . G 4 HOH A 103 894 103 HOH HOH . G 4 HOH A 104 895 104 HOH HOH . G 4 HOH A 105 896 105 HOH HOH . G 4 HOH A 106 897 106 HOH HOH . G 4 HOH A 107 898 107 HOH HOH . G 4 HOH A 108 899 108 HOH HOH . G 4 HOH A 109 900 109 HOH HOH . G 4 HOH A 110 901 110 HOH HOH . G 4 HOH A 111 902 111 HOH HOH . G 4 HOH A 112 903 112 HOH HOH . G 4 HOH A 113 904 113 HOH HOH . G 4 HOH A 114 905 114 HOH HOH . G 4 HOH A 115 906 115 HOH HOH . G 4 HOH A 116 907 116 HOH HOH . G 4 HOH A 117 908 117 HOH HOH . G 4 HOH A 118 909 118 HOH HOH . G 4 HOH A 119 910 119 HOH HOH . G 4 HOH A 120 911 120 HOH HOH . G 4 HOH A 121 912 121 HOH HOH . G 4 HOH A 122 913 122 HOH HOH . G 4 HOH A 123 914 123 HOH HOH . G 4 HOH A 124 915 124 HOH HOH . G 4 HOH A 125 916 125 HOH HOH . G 4 HOH A 126 917 126 HOH HOH . G 4 HOH A 127 918 127 HOH HOH . G 4 HOH A 128 919 128 HOH HOH . G 4 HOH A 129 920 129 HOH HOH . G 4 HOH A 130 921 130 HOH HOH . G 4 HOH A 131 922 131 HOH HOH . G 4 HOH A 132 923 132 HOH HOH . G 4 HOH A 133 924 133 HOH HOH . G 4 HOH A 134 925 134 HOH HOH . G 4 HOH A 135 926 135 HOH HOH . G 4 HOH A 136 927 136 HOH HOH . G 4 HOH A 137 928 137 HOH HOH . G 4 HOH A 138 929 138 HOH HOH . G 4 HOH A 139 930 139 HOH HOH . G 4 HOH A 140 931 140 HOH HOH . G 4 HOH A 141 932 141 HOH HOH . G 4 HOH A 142 933 142 HOH HOH . G 4 HOH A 143 934 143 HOH HOH . G 4 HOH A 144 935 144 HOH HOH . G 4 HOH A 145 936 145 HOH HOH . G 4 HOH A 146 937 146 HOH HOH . G 4 HOH A 147 938 147 HOH HOH . G 4 HOH A 148 939 148 HOH HOH . G 4 HOH A 149 940 149 HOH HOH . G 4 HOH A 150 941 150 HOH HOH . G 4 HOH A 151 942 151 HOH HOH . G 4 HOH A 152 943 152 HOH HOH . G 4 HOH A 153 944 153 HOH HOH . G 4 HOH A 154 945 154 HOH HOH . G 4 HOH A 155 946 155 HOH HOH . G 4 HOH A 156 947 156 HOH HOH . G 4 HOH A 157 948 157 HOH HOH . G 4 HOH A 158 949 158 HOH HOH . G 4 HOH A 159 950 159 HOH HOH . G 4 HOH A 160 951 160 HOH HOH . G 4 HOH A 161 952 161 HOH HOH . G 4 HOH A 162 953 162 HOH HOH . G 4 HOH A 163 954 163 HOH HOH . G 4 HOH A 164 955 164 HOH HOH . G 4 HOH A 165 956 165 HOH HOH . G 4 HOH A 166 957 166 HOH HOH . G 4 HOH A 167 958 167 HOH HOH . G 4 HOH A 168 959 168 HOH HOH . G 4 HOH A 169 960 169 HOH HOH . G 4 HOH A 170 961 170 HOH HOH . G 4 HOH A 171 962 171 HOH HOH . G 4 HOH A 172 963 172 HOH HOH . G 4 HOH A 173 964 173 HOH HOH . G 4 HOH A 174 965 174 HOH HOH . G 4 HOH A 175 966 175 HOH HOH . G 4 HOH A 176 967 176 HOH HOH . G 4 HOH A 177 968 177 HOH HOH . G 4 HOH A 178 969 178 HOH HOH . G 4 HOH A 179 970 179 HOH HOH . G 4 HOH A 180 971 180 HOH HOH . G 4 HOH A 181 972 181 HOH HOH . G 4 HOH A 182 973 182 HOH HOH . G 4 HOH A 183 974 183 HOH HOH . G 4 HOH A 184 975 184 HOH HOH . G 4 HOH A 185 976 185 HOH HOH . G 4 HOH A 186 977 186 HOH HOH . G 4 HOH A 187 978 187 HOH HOH . G 4 HOH A 188 979 188 HOH HOH . G 4 HOH A 189 980 189 HOH HOH . G 4 HOH A 190 981 190 HOH HOH . G 4 HOH A 191 982 191 HOH HOH . G 4 HOH A 192 983 192 HOH HOH . G 4 HOH A 193 984 193 HOH HOH . G 4 HOH A 194 985 194 HOH HOH . G 4 HOH A 195 986 195 HOH HOH . G 4 HOH A 196 987 196 HOH HOH . G 4 HOH A 197 988 198 HOH HOH . G 4 HOH A 198 989 200 HOH HOH . G 4 HOH A 199 990 201 HOH HOH . G 4 HOH A 200 991 203 HOH HOH . G 4 HOH A 201 992 204 HOH HOH . G 4 HOH A 202 993 206 HOH HOH . G 4 HOH A 203 994 208 HOH HOH . G 4 HOH A 204 995 209 HOH HOH . G 4 HOH A 205 996 210 HOH HOH . G 4 HOH A 206 997 212 HOH HOH . G 4 HOH A 207 998 213 HOH HOH . G 4 HOH A 208 999 216 HOH HOH . G 4 HOH A 209 1000 217 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O NDZ . . . B 2 20.313 -4.205 10.351 1 23.29 ? O NDZ 1 A 1 HETATM 2 C C NDZ . . . B 2 21.528 -4.06 10.595 1 22.81 ? C NDZ 1 A 1 HETATM 3 O OXT NDZ . . . B 2 22.416 -4.943 10.485 1 24.95 ? OXT NDZ 1 A 1 HETATM 4 C CA NDZ . . . B 2 21.967 -2.697 11.097 1 21.08 ? CA NDZ 1 A 1 HETATM 5 N N NDZ . . . B 2 20.776 -1.881 11.353 1 20.58 ? N NDZ 1 A 1 HETATM 6 C CB NDZ . . . B 2 22.735 -2.95 12.404 1 22.62 ? CB NDZ 1 A 1 HETATM 7 C CAJ NDZ . . . B 2 23.572 -1.728 12.812 1 23.52 ? CAJ NDZ 1 A 1 HETATM 8 C CAD NDZ . . . B 2 24.579 -1.302 11.685 1 24.3 ? CAD NDZ 1 A 1 HETATM 9 O OAA NDZ . . . B 2 24.665 -0.089 11.399 1 22.95 ? OAA NDZ 1 A 1 HETATM 10 O OAE NDZ . . . B 2 25.251 -2.215 11.144 1 24.77 ? OAE NDZ 1 A 1 HETATM 11 C CAR NDZ . . . B 2 24.322 -2.068 14.126 1 24.86 ? CAR NDZ 1 A 1 HETATM 12 O OAI NDZ . . . B 2 22.666 -0.619 13.12 1 23.93 ? OAI NDZ 1 A 1 HETATM 13 C CAH NDZ . . . B 2 22.793 -0.304 14.535 1 25.46 ? CAH NDZ 1 A 1 HETATM 14 C CAQ NDZ . . . B 2 24.202 -0.793 14.957 1 26.19 ? CAQ NDZ 1 A 1 HETATM 15 O OAP NDZ . . . B 2 25.251 0.091 14.508 1 25.6 ? OAP NDZ 1 A 1 HETATM 16 C CAO NDZ . . . B 2 25.06 1.467 14.948 1 27.55 ? CAO NDZ 1 A 1 HETATM 17 C CAF NDZ . . . B 2 23.774 2.071 14.358 1 25.25 ? CAF NDZ 1 A 1 HETATM 18 O OAB NDZ . . . B 2 23.88 2.157 12.92 1 21.46 ? OAB NDZ 1 A 1 HETATM 19 C CAG NDZ . . . B 2 22.544 1.212 14.748 1 27.16 ? CAG NDZ 1 A 1 HETATM 20 O OAC NDZ . . . B 2 21.349 1.621 14.013 1 22.35 ? OAC NDZ 1 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 20 #