data_2ZO3
#
_model_server_result.job_id            YV_uvWwxzeuo1E_3G3r0OQ 
_model_server_result.datetime_utc      '2024-11-26 09:45:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2zo3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":2502}' 
#
_entry.id    2ZO3 
#
_exptl.entry_id    2ZO3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          100.1 
_cell.angle_gamma         90 
_cell.entry_id            2ZO3 
_cell.length_a            69.95 
_cell.length_b            71.64 
_cell.length_c            71.91 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2ZO3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 E N N 
? 5 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 9 L CYS 1 1_555 B SG CYS 119 H CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf2 B SG CYS 28 H CYS 42 1_555 B SG CYS 44 H CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf3 B SG CYS 173 H CYS 168 1_555 B SG CYS 187 H CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
disulf ? disulf4 B SG CYS 201 H CYS 191 1_555 B SG CYS 231 H CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? 
covale ? covale1 C C GLU 9 I GLU 62 1_555 C N TYS 10 I TYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     2ZO3 
_atom_sites.fract_transf_matrix[1][1]    0.014297 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002542 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013959 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014125 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 33U H 1 2501 2501 33U 33U . 
E 5 NA H 1 2502 2502 NA NA . 
F 5 NA H 1 2503 2503 NA NA . 
G 6 HOH L 1 3014 3014 HOH HOH . 
G 6 HOH L 2 3019 3019 HOH HOH . 
G 6 HOH L 3 3022 3022 HOH HOH . 
G 6 HOH L 4 3024 3024 HOH HOH . 
G 6 HOH L 5 3033 3033 HOH HOH . 
G 6 HOH L 6 3037 3037 HOH HOH . 
G 6 HOH L 7 3041 3041 HOH HOH . 
G 6 HOH L 8 3046 3046 HOH HOH . 
G 6 HOH L 9 3052 3052 HOH HOH . 
G 6 HOH L 10 3055 3055 HOH HOH . 
G 6 HOH L 11 3064 3064 HOH HOH . 
G 6 HOH L 12 3082 3082 HOH HOH . 
G 6 HOH L 13 3089 3089 HOH HOH . 
G 6 HOH L 14 3111 3111 HOH HOH . 
G 6 HOH L 15 3127 3127 HOH HOH . 
G 6 HOH L 16 3129 3129 HOH HOH . 
G 6 HOH L 17 3144 3144 HOH HOH . 
G 6 HOH L 18 3148 3148 HOH HOH . 
G 6 HOH L 19 3150 3150 HOH HOH . 
G 6 HOH L 20 3153 3153 HOH HOH . 
G 6 HOH L 21 3155 3155 HOH HOH . 
G 6 HOH L 22 3168 3168 HOH HOH . 
G 6 HOH L 23 3173 3173 HOH HOH . 
G 6 HOH L 24 3175 3175 HOH HOH . 
G 6 HOH L 25 3188 3188 HOH HOH . 
G 6 HOH L 26 3192 3192 HOH HOH . 
H 6 HOH H 1 3001 3001 HOH HOH . 
H 6 HOH H 2 3002 3002 HOH HOH . 
H 6 HOH H 3 3003 3003 HOH HOH . 
H 6 HOH H 4 3004 3004 HOH HOH . 
H 6 HOH H 5 3005 3005 HOH HOH . 
H 6 HOH H 6 3006 3006 HOH HOH . 
H 6 HOH H 7 3007 3007 HOH HOH . 
H 6 HOH H 8 3008 3008 HOH HOH . 
H 6 HOH H 9 3009 3009 HOH HOH . 
H 6 HOH H 10 3010 3010 HOH HOH . 
H 6 HOH H 11 3011 3011 HOH HOH . 
H 6 HOH H 12 3012 3012 HOH HOH . 
H 6 HOH H 13 3013 3013 HOH HOH . 
H 6 HOH H 14 3015 3015 HOH HOH . 
H 6 HOH H 15 3016 3016 HOH HOH . 
H 6 HOH H 16 3017 3017 HOH HOH . 
H 6 HOH H 17 3018 3018 HOH HOH . 
H 6 HOH H 18 3020 3020 HOH HOH . 
H 6 HOH H 19 3021 3021 HOH HOH . 
H 6 HOH H 20 3023 3023 HOH HOH . 
H 6 HOH H 21 3025 3025 HOH HOH . 
H 6 HOH H 22 3026 3026 HOH HOH . 
H 6 HOH H 23 3027 3027 HOH HOH . 
H 6 HOH H 24 3028 3028 HOH HOH . 
H 6 HOH H 25 3029 3029 HOH HOH . 
H 6 HOH H 26 3030 3030 HOH HOH . 
H 6 HOH H 27 3031 3031 HOH HOH . 
H 6 HOH H 28 3032 3032 HOH HOH . 
H 6 HOH H 29 3034 3034 HOH HOH . 
H 6 HOH H 30 3035 3035 HOH HOH . 
H 6 HOH H 31 3036 3036 HOH HOH . 
H 6 HOH H 32 3038 3038 HOH HOH . 
H 6 HOH H 33 3039 3039 HOH HOH . 
H 6 HOH H 34 3040 3040 HOH HOH . 
H 6 HOH H 35 3042 3042 HOH HOH . 
H 6 HOH H 36 3043 3043 HOH HOH . 
H 6 HOH H 37 3044 3044 HOH HOH . 
H 6 HOH H 38 3045 3045 HOH HOH . 
H 6 HOH H 39 3047 3047 HOH HOH . 
H 6 HOH H 40 3048 3048 HOH HOH . 
H 6 HOH H 41 3049 3049 HOH HOH . 
H 6 HOH H 42 3050 3050 HOH HOH . 
H 6 HOH H 43 3051 3051 HOH HOH . 
H 6 HOH H 44 3053 3053 HOH HOH . 
H 6 HOH H 45 3054 3054 HOH HOH . 
H 6 HOH H 46 3056 3056 HOH HOH . 
H 6 HOH H 47 3057 3057 HOH HOH . 
H 6 HOH H 48 3058 3058 HOH HOH . 
H 6 HOH H 49 3059 3059 HOH HOH . 
H 6 HOH H 50 3060 3060 HOH HOH . 
H 6 HOH H 51 3061 3061 HOH HOH . 
H 6 HOH H 52 3062 3062 HOH HOH . 
H 6 HOH H 53 3063 3063 HOH HOH . 
H 6 HOH H 54 3065 3065 HOH HOH . 
H 6 HOH H 55 3066 3066 HOH HOH . 
H 6 HOH H 56 3067 3067 HOH HOH . 
H 6 HOH H 57 3068 3068 HOH HOH . 
H 6 HOH H 58 3069 3069 HOH HOH . 
H 6 HOH H 59 3070 3070 HOH HOH . 
H 6 HOH H 60 3071 3071 HOH HOH . 
H 6 HOH H 61 3072 3072 HOH HOH . 
H 6 HOH H 62 3073 3073 HOH HOH . 
H 6 HOH H 63 3074 3074 HOH HOH . 
H 6 HOH H 64 3075 3075 HOH HOH . 
H 6 HOH H 65 3076 3076 HOH HOH . 
H 6 HOH H 66 3077 3077 HOH HOH . 
H 6 HOH H 67 3078 3078 HOH HOH . 
H 6 HOH H 68 3079 3079 HOH HOH . 
H 6 HOH H 69 3080 3080 HOH HOH . 
H 6 HOH H 70 3081 3081 HOH HOH . 
H 6 HOH H 71 3083 3083 HOH HOH . 
H 6 HOH H 72 3084 3084 HOH HOH . 
H 6 HOH H 73 3085 3085 HOH HOH . 
H 6 HOH H 74 3086 3086 HOH HOH . 
H 6 HOH H 75 3087 3087 HOH HOH . 
H 6 HOH H 76 3088 3088 HOH HOH . 
H 6 HOH H 77 3090 3090 HOH HOH . 
H 6 HOH H 78 3091 3091 HOH HOH . 
H 6 HOH H 79 3092 3092 HOH HOH . 
H 6 HOH H 80 3093 3093 HOH HOH . 
H 6 HOH H 81 3094 3094 HOH HOH . 
H 6 HOH H 82 3095 3095 HOH HOH . 
H 6 HOH H 83 3096 3096 HOH HOH . 
H 6 HOH H 84 3097 3097 HOH HOH . 
H 6 HOH H 85 3098 3098 HOH HOH . 
H 6 HOH H 86 3099 3099 HOH HOH . 
H 6 HOH H 87 3100 3100 HOH HOH . 
H 6 HOH H 88 3101 3101 HOH HOH . 
H 6 HOH H 89 3102 3102 HOH HOH . 
H 6 HOH H 90 3103 3103 HOH HOH . 
H 6 HOH H 91 3104 3104 HOH HOH . 
H 6 HOH H 92 3105 3105 HOH HOH . 
H 6 HOH H 93 3106 3106 HOH HOH . 
H 6 HOH H 94 3107 3107 HOH HOH . 
H 6 HOH H 95 3108 3108 HOH HOH . 
H 6 HOH H 96 3109 3109 HOH HOH . 
H 6 HOH H 97 3110 3110 HOH HOH . 
H 6 HOH H 98 3113 3113 HOH HOH . 
H 6 HOH H 99 3114 3114 HOH HOH . 
H 6 HOH H 100 3115 3115 HOH HOH . 
H 6 HOH H 101 3116 3116 HOH HOH . 
H 6 HOH H 102 3117 3117 HOH HOH . 
H 6 HOH H 103 3118 3118 HOH HOH . 
H 6 HOH H 104 3119 3119 HOH HOH . 
H 6 HOH H 105 3120 3120 HOH HOH . 
H 6 HOH H 106 3121 3121 HOH HOH . 
H 6 HOH H 107 3122 3122 HOH HOH . 
H 6 HOH H 108 3123 3123 HOH HOH . 
H 6 HOH H 109 3124 3124 HOH HOH . 
H 6 HOH H 110 3125 3125 HOH HOH . 
H 6 HOH H 111 3126 3126 HOH HOH . 
H 6 HOH H 112 3128 3128 HOH HOH . 
H 6 HOH H 113 3130 3130 HOH HOH . 
H 6 HOH H 114 3131 3131 HOH HOH . 
H 6 HOH H 115 3132 3132 HOH HOH . 
H 6 HOH H 116 3133 3133 HOH HOH . 
H 6 HOH H 117 3134 3134 HOH HOH . 
H 6 HOH H 118 3135 3135 HOH HOH . 
H 6 HOH H 119 3136 3136 HOH HOH . 
H 6 HOH H 120 3137 3137 HOH HOH . 
H 6 HOH H 121 3138 3138 HOH HOH . 
H 6 HOH H 122 3139 3139 HOH HOH . 
H 6 HOH H 123 3140 3140 HOH HOH . 
H 6 HOH H 124 3141 3141 HOH HOH . 
H 6 HOH H 125 3142 3142 HOH HOH . 
H 6 HOH H 126 3143 3143 HOH HOH . 
H 6 HOH H 127 3145 3145 HOH HOH . 
H 6 HOH H 128 3146 3146 HOH HOH . 
H 6 HOH H 129 3147 3147 HOH HOH . 
H 6 HOH H 130 3149 3149 HOH HOH . 
H 6 HOH H 131 3151 3151 HOH HOH . 
H 6 HOH H 132 3152 3152 HOH HOH . 
H 6 HOH H 133 3154 3154 HOH HOH . 
H 6 HOH H 134 3156 3156 HOH HOH . 
H 6 HOH H 135 3157 3157 HOH HOH . 
H 6 HOH H 136 3159 3159 HOH HOH . 
H 6 HOH H 137 3160 3160 HOH HOH . 
H 6 HOH H 138 3161 3161 HOH HOH . 
H 6 HOH H 139 3162 3162 HOH HOH . 
H 6 HOH H 140 3164 3164 HOH HOH . 
H 6 HOH H 141 3165 3165 HOH HOH . 
H 6 HOH H 142 3166 3166 HOH HOH . 
H 6 HOH H 143 3167 3167 HOH HOH . 
H 6 HOH H 144 3169 3169 HOH HOH . 
H 6 HOH H 145 3170 3170 HOH HOH . 
H 6 HOH H 146 3171 3171 HOH HOH . 
H 6 HOH H 147 3172 3172 HOH HOH . 
H 6 HOH H 148 3174 3174 HOH HOH . 
H 6 HOH H 149 3176 3176 HOH HOH . 
H 6 HOH H 150 3177 3177 HOH HOH . 
H 6 HOH H 151 3178 3178 HOH HOH . 
H 6 HOH H 152 3179 3179 HOH HOH . 
H 6 HOH H 153 3180 3180 HOH HOH . 
H 6 HOH H 154 3181 3181 HOH HOH . 
H 6 HOH H 155 3182 3182 HOH HOH . 
H 6 HOH H 156 3183 3183 HOH HOH . 
H 6 HOH H 157 3184 3184 HOH HOH . 
H 6 HOH H 158 3185 3185 HOH HOH . 
H 6 HOH H 159 3186 3186 HOH HOH . 
H 6 HOH H 160 3187 3187 HOH HOH . 
H 6 HOH H 161 3189 3189 HOH HOH . 
H 6 HOH H 162 3190 3190 HOH HOH . 
H 6 HOH H 163 3191 3191 HOH HOH . 
H 6 HOH H 164 3193 3193 HOH HOH . 
H 6 HOH H 165 3194 3194 HOH HOH . 
H 6 HOH H 166 3195 3195 HOH HOH . 
I 6 HOH I 1 3112 3112 HOH HOH . 
I 6 HOH I 2 3158 3158 HOH HOH . 
I 6 HOH I 3 3163 3163 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         E 
_atom_site.label_entity_id       5 
_atom_site.Cartn_x               5.669 
_atom_site.Cartn_y               -12.87 
_atom_site.Cartn_z               30.325 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        18.86 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           2502 
_atom_site.auth_asym_id          H 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    17 
_model_server_stats.query_time_ms           355 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#