data_2ZR2
#
_model_server_result.job_id            1nbytwzTQ6dXdp-4DmXiNg 
_model_server_result.datetime_utc      '2024-10-18 18:20:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2zr2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":1002}' 
#
_entry.id    2ZR2 
#
_exptl.entry_id    2ZR2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              347.221 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ADENOSINE MONOPHOSPHATE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2ZR2 
_cell.length_a            96.656 
_cell.length_b            120.499 
_cell.length_c            126.777 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2ZR2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 H N N 
#
_chem_comp.formula           'C10 H14 N5 O7 P' 
_chem_comp.formula_weight    347.221 
_chem_comp.id                AMP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ADENOSINE MONOPHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1P AMP doub 13 n n 
P O2P AMP sing 14 n n 
P O3P AMP sing 15 n n 
P O5' AMP sing 16 n n 
O2P HOP2 AMP sing 17 n n 
O3P HOP3 AMP sing 18 n n 
O5' C5' AMP sing 19 n n 
C5' C4' AMP sing 20 n n 
C5' "H5'1" AMP sing 21 n n 
C5' "H5'2" AMP sing 22 n n 
C4' O4' AMP sing 23 n n 
C4' C3' AMP sing 24 n n 
C4' H4' AMP sing 25 n n 
O4' C1' AMP sing 26 n n 
C3' O3' AMP sing 27 n n 
C3' C2' AMP sing 28 n n 
C3' H3' AMP sing 29 n n 
O3' HO3' AMP sing 30 n n 
C2' O2' AMP sing 31 n n 
C2' C1' AMP sing 32 n n 
C2' H2' AMP sing 33 n n 
O2' HO2' AMP sing 34 n n 
C1' N9 AMP sing 35 n n 
C1' H1' AMP sing 36 n n 
N9 C8 AMP sing 37 n y 
N9 C4 AMP sing 38 n y 
C8 N7 AMP doub 39 n y 
C8 H8 AMP sing 40 n n 
N7 C5 AMP sing 41 n y 
C5 C6 AMP sing 42 n y 
C5 C4 AMP doub 43 n y 
C6 N6 AMP sing 44 n n 
C6 N1 AMP doub 45 n y 
N6 HN61 AMP sing 46 n n 
N6 HN62 AMP sing 47 n n 
N1 C2 AMP sing 48 n y 
C2 N3 AMP doub 49 n y 
C2 H2 AMP sing 50 n n 
N3 C4 AMP sing 51 n y 
#
_atom_sites.entry_id                     2ZR2 
_atom_sites.fract_transf_matrix[1][1]    0.010346 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008299 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007888 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 AMP A 1 1001 1001 AMP AMP . 
D 3 SO4 A 1 2001 2001 SO4 SO4 . 
E 3 SO4 A 1 2003 2003 SO4 SO4 . 
F 3 SO4 A 1 2005 2005 SO4 SO4 . 
G 3 SO4 A 1 2007 2007 SO4 SO4 . 
H 2 AMP B 1 1002 1002 AMP AMP . 
I 3 SO4 B 1 2002 2002 SO4 SO4 . 
J 3 SO4 B 1 2004 2004 SO4 SO4 . 
K 3 SO4 B 1 2006 2006 SO4 SO4 . 
L 4 HOH A 1 2008 2 HOH HOH . 
L 4 HOH A 2 2009 4 HOH HOH . 
L 4 HOH A 3 2010 6 HOH HOH . 
L 4 HOH A 4 2011 8 HOH HOH . 
L 4 HOH A 5 2012 10 HOH HOH . 
L 4 HOH A 6 2013 11 HOH HOH . 
L 4 HOH A 7 2014 13 HOH HOH . 
L 4 HOH A 8 2015 14 HOH HOH . 
L 4 HOH A 9 2016 16 HOH HOH . 
L 4 HOH A 10 2017 19 HOH HOH . 
L 4 HOH A 11 2018 21 HOH HOH . 
L 4 HOH A 12 2019 23 HOH HOH . 
L 4 HOH A 13 2020 26 HOH HOH . 
L 4 HOH A 14 2021 30 HOH HOH . 
L 4 HOH A 15 2022 31 HOH HOH . 
L 4 HOH A 16 2023 32 HOH HOH . 
L 4 HOH A 17 2024 33 HOH HOH . 
L 4 HOH A 18 2025 34 HOH HOH . 
L 4 HOH A 19 2026 35 HOH HOH . 
L 4 HOH A 20 2027 36 HOH HOH . 
L 4 HOH A 21 2028 43 HOH HOH . 
L 4 HOH A 22 2029 44 HOH HOH . 
L 4 HOH A 23 2030 45 HOH HOH . 
L 4 HOH A 24 2031 46 HOH HOH . 
L 4 HOH A 25 2032 47 HOH HOH . 
L 4 HOH A 26 2033 48 HOH HOH . 
L 4 HOH A 27 2034 49 HOH HOH . 
L 4 HOH A 28 2035 50 HOH HOH . 
L 4 HOH A 29 2036 51 HOH HOH . 
L 4 HOH A 30 2037 52 HOH HOH . 
L 4 HOH A 31 2038 53 HOH HOH . 
L 4 HOH A 32 2039 54 HOH HOH . 
L 4 HOH A 33 2040 55 HOH HOH . 
L 4 HOH A 34 2041 56 HOH HOH . 
L 4 HOH A 35 2042 57 HOH HOH . 
M 4 HOH B 1 2007 1 HOH HOH . 
M 4 HOH B 2 2008 3 HOH HOH . 
M 4 HOH B 3 2009 5 HOH HOH . 
M 4 HOH B 4 2010 7 HOH HOH . 
M 4 HOH B 5 2011 9 HOH HOH . 
M 4 HOH B 6 2012 12 HOH HOH . 
M 4 HOH B 7 2013 15 HOH HOH . 
M 4 HOH B 8 2014 17 HOH HOH . 
M 4 HOH B 9 2015 18 HOH HOH . 
M 4 HOH B 10 2016 20 HOH HOH . 
M 4 HOH B 11 2017 22 HOH HOH . 
M 4 HOH B 12 2018 24 HOH HOH . 
M 4 HOH B 13 2019 25 HOH HOH . 
M 4 HOH B 14 2020 27 HOH HOH . 
M 4 HOH B 15 2021 28 HOH HOH . 
M 4 HOH B 16 2022 29 HOH HOH . 
M 4 HOH B 17 2023 37 HOH HOH . 
M 4 HOH B 18 2024 38 HOH HOH . 
M 4 HOH B 19 2025 39 HOH HOH . 
M 4 HOH B 20 2026 40 HOH HOH . 
M 4 HOH B 21 2027 41 HOH HOH . 
M 4 HOH B 22 2028 42 HOH HOH . 
M 4 HOH B 23 2029 58 HOH HOH . 
M 4 HOH B 24 2030 59 HOH HOH . 
M 4 HOH B 25 2031 60 HOH HOH . 
M 4 HOH B 26 2032 61 HOH HOH . 
M 4 HOH B 27 2033 62 HOH HOH . 
M 4 HOH B 28 2034 63 HOH HOH . 
M 4 HOH B 29 2035 64 HOH HOH . 
M 4 HOH B 30 2036 65 HOH HOH . 
M 4 HOH B 31 2037 66 HOH HOH . 
M 4 HOH B 32 2038 67 HOH HOH . 
M 4 HOH B 33 2039 68 HOH HOH . 
M 4 HOH B 34 2040 69 HOH HOH . 
M 4 HOH B 35 2041 70 HOH HOH . 
M 4 HOH B 36 2042 71 HOH HOH . 
M 4 HOH B 37 2043 72 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P AMP . . . H 2 29.015 36.863 21.529 1 55.48 ? P AMP 1002 B 1 
HETATM 2 O O1P AMP . . . H 2 29.655 37.93 22.347 1 47.92 ? O1P AMP 1002 B 1 
HETATM 3 O O2P AMP . . . H 2 27.406 36.879 21.688 1 58.38 ? O2P AMP 1002 B 1 
HETATM 4 O O3P AMP . . . H 2 29.514 35.401 21.959 1 54.54 ? O3P AMP 1002 B 1 
HETATM 5 O O5' AMP . . . H 2 29.262 36.942 19.929 1 55.12 ? O5' AMP 1002 B 1 
HETATM 6 C C5' AMP . . . H 2 30.547 37.196 19.358 1 45.44 ? C5' AMP 1002 B 1 
HETATM 7 C C4' AMP . . . H 2 30.484 37 17.845 1 51.78 ? C4' AMP 1002 B 1 
HETATM 8 O O4' AMP . . . H 2 30.081 35.648 17.502 1 49.93 ? O4' AMP 1002 B 1 
HETATM 9 C C3' AMP . . . H 2 29.418 37.876 17.21 1 64.2 ? C3' AMP 1002 B 1 
HETATM 10 O O3' AMP . . . H 2 29.911 39.222 17.07 1 55.29 ? O3' AMP 1002 B 1 
HETATM 11 C C2' AMP . . . H 2 29.319 37.216 15.846 1 62.69 ? C2' AMP 1002 B 1 
HETATM 12 O O2' AMP . . . H 2 30.464 37.54 15.033 1 60.58 ? O2' AMP 1002 B 1 
HETATM 13 C C1' AMP . . . H 2 29.342 35.722 16.225 1 52.57 ? C1' AMP 1002 B 1 
HETATM 14 N N9 AMP . . . H 2 27.97 35.189 16.48 1 55.78 ? N9 AMP 1002 B 1 
HETATM 15 C C8 AMP . . . H 2 27.255 35.32 17.614 1 51.95 ? C8 AMP 1002 B 1 
HETATM 16 N N7 AMP . . . H 2 26.112 34.624 17.497 1 51.68 ? N7 AMP 1002 B 1 
HETATM 17 C C5 AMP . . . H 2 26.1 34.061 16.289 1 56.98 ? C5 AMP 1002 B 1 
HETATM 18 C C6 AMP . . . H 2 25.188 33.251 15.599 1 59.17 ? C6 AMP 1002 B 1 
HETATM 19 N N6 AMP . . . H 2 24.071 32.82 16.19 1 53.62 ? N6 AMP 1002 B 1 
HETATM 20 N N1 AMP . . . H 2 25.471 32.869 14.329 1 60.5 ? N1 AMP 1002 B 1 
HETATM 21 C C2 AMP . . . H 2 26.609 33.24 13.734 1 55.46 ? C2 AMP 1002 B 1 
HETATM 22 N N3 AMP . . . H 2 27.498 34.006 14.378 1 51.25 ? N3 AMP 1002 B 1 
HETATM 23 C C4 AMP . . . H 2 27.272 34.422 15.644 1 55.52 ? C4 AMP 1002 B 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           300 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           23 
#