data_2ZR9 # _model_server_result.job_id uk7F-hSTBjFDcMU5tUWLVw _model_server_result.datetime_utc '2025-08-31 03:37:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2zr9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":501}' # _entry.id 2ZR9 # _exptl.entry_id 2ZR9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2ZR9 _cell.length_a 101.959 _cell.length_b 101.959 _cell.length_c 75.15 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ZR9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 164 n n C1 C2 GOL sing 165 n n C1 H11 GOL sing 166 n n C1 H12 GOL sing 167 n n O1 HO1 GOL sing 168 n n C2 O2 GOL sing 169 n n C2 C3 GOL sing 170 n n C2 H2 GOL sing 171 n n O2 HO2 GOL sing 172 n n C3 O3 GOL sing 173 n n C3 H31 GOL sing 174 n n C3 H32 GOL sing 175 n n O3 HO3 GOL sing 176 n n # _atom_sites.entry_id 2ZR9 _atom_sites.fract_transf_matrix[1][1] 0.009808 _atom_sites.fract_transf_matrix[1][2] 0.005663 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011325 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013307 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DTP A 1 600 600 DTP DTP . C 3 CL A 1 500 500 CL CL . D 3 CL A 1 502 502 CL CL . E 4 GOL A 1 501 501 GOL GOL . F 5 HOH A 1 601 2 HOH HOH . F 5 HOH A 2 602 3 HOH HOH . F 5 HOH A 3 603 4 HOH HOH . F 5 HOH A 4 604 5 HOH HOH . F 5 HOH A 5 605 6 HOH HOH . F 5 HOH A 6 606 7 HOH HOH . F 5 HOH A 7 607 9 HOH HOH . F 5 HOH A 8 608 10 HOH HOH . F 5 HOH A 9 609 11 HOH HOH . F 5 HOH A 10 610 12 HOH HOH . F 5 HOH A 11 611 13 HOH HOH . F 5 HOH A 12 612 14 HOH HOH . F 5 HOH A 13 613 15 HOH HOH . F 5 HOH A 14 614 16 HOH HOH . F 5 HOH A 15 615 17 HOH HOH . F 5 HOH A 16 616 19 HOH HOH . F 5 HOH A 17 617 22 HOH HOH . F 5 HOH A 18 618 23 HOH HOH . F 5 HOH A 19 619 24 HOH HOH . F 5 HOH A 20 620 26 HOH HOH . F 5 HOH A 21 621 27 HOH HOH . F 5 HOH A 22 622 28 HOH HOH . F 5 HOH A 23 623 30 HOH HOH . F 5 HOH A 24 624 31 HOH HOH . F 5 HOH A 25 625 32 HOH HOH . F 5 HOH A 26 626 34 HOH HOH . F 5 HOH A 27 627 35 HOH HOH . F 5 HOH A 28 628 36 HOH HOH . F 5 HOH A 29 629 37 HOH HOH . F 5 HOH A 30 630 38 HOH HOH . F 5 HOH A 31 631 39 HOH HOH . F 5 HOH A 32 632 40 HOH HOH . F 5 HOH A 33 633 41 HOH HOH . F 5 HOH A 34 634 42 HOH HOH . F 5 HOH A 35 635 43 HOH HOH . F 5 HOH A 36 636 44 HOH HOH . F 5 HOH A 37 637 45 HOH HOH . F 5 HOH A 38 638 46 HOH HOH . F 5 HOH A 39 639 47 HOH HOH . F 5 HOH A 40 640 52 HOH HOH . F 5 HOH A 41 641 53 HOH HOH . F 5 HOH A 42 642 54 HOH HOH . F 5 HOH A 43 643 56 HOH HOH . F 5 HOH A 44 644 59 HOH HOH . F 5 HOH A 45 645 60 HOH HOH . F 5 HOH A 46 646 61 HOH HOH . F 5 HOH A 47 647 62 HOH HOH . F 5 HOH A 48 648 63 HOH HOH . F 5 HOH A 49 649 64 HOH HOH . F 5 HOH A 50 650 65 HOH HOH . F 5 HOH A 51 651 66 HOH HOH . F 5 HOH A 52 652 68 HOH HOH . F 5 HOH A 53 653 69 HOH HOH . F 5 HOH A 54 654 70 HOH HOH . F 5 HOH A 55 655 71 HOH HOH . F 5 HOH A 56 656 72 HOH HOH . F 5 HOH A 57 657 73 HOH HOH . F 5 HOH A 58 658 79 HOH HOH . F 5 HOH A 59 659 80 HOH HOH . F 5 HOH A 60 660 81 HOH HOH . F 5 HOH A 61 661 83 HOH HOH . F 5 HOH A 62 662 84 HOH HOH . F 5 HOH A 63 663 88 HOH HOH . F 5 HOH A 64 664 91 HOH HOH . F 5 HOH A 65 665 95 HOH HOH . F 5 HOH A 66 666 97 HOH HOH . F 5 HOH A 67 667 98 HOH HOH . F 5 HOH A 68 668 99 HOH HOH . F 5 HOH A 69 669 101 HOH HOH . F 5 HOH A 70 670 104 HOH HOH . F 5 HOH A 71 671 106 HOH HOH . F 5 HOH A 72 672 117 HOH HOH . F 5 HOH A 73 673 119 HOH HOH . F 5 HOH A 74 674 123 HOH HOH . F 5 HOH A 75 675 126 HOH HOH . F 5 HOH A 76 676 128 HOH HOH . F 5 HOH A 77 677 131 HOH HOH . F 5 HOH A 78 678 132 HOH HOH . F 5 HOH A 79 679 133 HOH HOH . F 5 HOH A 80 680 135 HOH HOH . F 5 HOH A 81 681 136 HOH HOH . F 5 HOH A 82 682 137 HOH HOH . F 5 HOH A 83 683 138 HOH HOH . F 5 HOH A 84 684 139 HOH HOH . F 5 HOH A 85 685 141 HOH HOH . F 5 HOH A 86 686 142 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 4 26.368 2.64 -6.343 1 44.95 ? C1 GOL 501 A 1 HETATM 2 O O1 GOL . . . E 4 27.012 3.329 -7.322 1 45.43 ? O1 GOL 501 A 1 HETATM 3 C C2 GOL . . . E 4 24.849 2.751 -6.197 1 44.43 ? C2 GOL 501 A 1 HETATM 4 O O2 GOL . . . E 4 24.018 2.161 -7.098 1 45.67 ? O2 GOL 501 A 1 HETATM 5 C C3 GOL . . . E 4 24.279 3.533 -5.013 1 47.27 ? C3 GOL 501 A 1 HETATM 6 O O3 GOL . . . E 4 23.077 3.172 -4.492 1 49.19 ? O3 GOL 501 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 348 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #