data_2ZRI # _model_server_result.job_id fytSFxiEkg9H3tYRWuDEMg _model_server_result.datetime_utc '2024-11-14 20:03:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2zri # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 2ZRI # _exptl.entry_id 2ZRI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2ZRI _cell.length_a 102.089 _cell.length_b 102.089 _cell.length_c 74.41 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ZRI _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 160 n n C1 C2 GOL sing 161 n n C1 H11 GOL sing 162 n n C1 H12 GOL sing 163 n n O1 HO1 GOL sing 164 n n C2 O2 GOL sing 165 n n C2 C3 GOL sing 166 n n C2 H2 GOL sing 167 n n O2 HO2 GOL sing 168 n n C3 O3 GOL sing 169 n n C3 H31 GOL sing 170 n n C3 H32 GOL sing 171 n n O3 HO3 GOL sing 172 n n # _atom_sites.entry_id 2ZRI _atom_sites.fract_transf_matrix[1][1] 0.009795 _atom_sites.fract_transf_matrix[1][2] 0.005655 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011311 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013439 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ADP A 1 500 500 ADP ADP . C 3 GOL A 1 501 501 GOL GOL . D 3 GOL A 1 502 502 GOL GOL . E 4 HOH A 1 503 1 HOH HOH . E 4 HOH A 2 504 2 HOH HOH . E 4 HOH A 3 505 5 HOH HOH . E 4 HOH A 4 506 10 HOH HOH . E 4 HOH A 5 507 11 HOH HOH . E 4 HOH A 6 508 13 HOH HOH . E 4 HOH A 7 509 17 HOH HOH . E 4 HOH A 8 510 19 HOH HOH . E 4 HOH A 9 511 20 HOH HOH . E 4 HOH A 10 512 22 HOH HOH . E 4 HOH A 11 513 23 HOH HOH . E 4 HOH A 12 514 29 HOH HOH . E 4 HOH A 13 515 35 HOH HOH . E 4 HOH A 14 516 40 HOH HOH . E 4 HOH A 15 517 44 HOH HOH . E 4 HOH A 16 518 48 HOH HOH . E 4 HOH A 17 519 49 HOH HOH . E 4 HOH A 18 520 50 HOH HOH . E 4 HOH A 19 521 52 HOH HOH . E 4 HOH A 20 522 53 HOH HOH . E 4 HOH A 21 523 54 HOH HOH . E 4 HOH A 22 524 55 HOH HOH . E 4 HOH A 23 525 57 HOH HOH . E 4 HOH A 24 526 58 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 9.647 45.336 -8.447 1 41.12 ? C1 GOL 501 A 1 HETATM 2 O O1 GOL . . . C 3 10.389 46.313 -7.861 1 41.12 ? O1 GOL 501 A 1 HETATM 3 C C2 GOL . . . C 3 10.324 44.087 -9.016 1 41.12 ? C2 GOL 501 A 1 HETATM 4 O O2 GOL . . . C 3 11.679 43.971 -8.967 1 41.12 ? O2 GOL 501 A 1 HETATM 5 C C3 GOL . . . C 3 9.48 42.972 -9.642 1 41.12 ? C3 GOL 501 A 1 HETATM 6 O O3 GOL . . . C 3 8.125 43.079 -9.707 1 41.12 ? O3 GOL 501 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #