data_2ZRM
#
_model_server_result.job_id            j6tMm82zeggW73WuElkmwQ 
_model_server_result.datetime_utc      '2024-11-29 16:51:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2zrm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":551}' 
#
_entry.id    2ZRM 
#
_exptl.entry_id    2ZRM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            2ZRM 
_cell.length_a            101.899 
_cell.length_b            101.899 
_cell.length_c            75.49 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2ZRM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        169 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 164 n n 
C1 C2 GOL sing 165 n n 
C1 H11 GOL sing 166 n n 
C1 H12 GOL sing 167 n n 
O1 HO1 GOL sing 168 n n 
C2 O2 GOL sing 169 n n 
C2 C3 GOL sing 170 n n 
C2 H2 GOL sing 171 n n 
O2 HO2 GOL sing 172 n n 
C3 O3 GOL sing 173 n n 
C3 H31 GOL sing 174 n n 
C3 H32 GOL sing 175 n n 
O3 HO3 GOL sing 176 n n 
#
_atom_sites.entry_id                     2ZRM 
_atom_sites.fract_transf_matrix[1][1]    0.009814 
_atom_sites.fract_transf_matrix[1][2]    0.005666 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011332 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013247 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 DTP A 1 600 600 DTP DTP . 
C 3 GOL A 1 550 550 GOL GOL . 
D 3 GOL A 1 551 551 GOL GOL . 
E 4 HOH A 1 601 1 HOH HOH . 
E 4 HOH A 2 602 2 HOH HOH . 
E 4 HOH A 3 603 4 HOH HOH . 
E 4 HOH A 4 604 7 HOH HOH . 
E 4 HOH A 5 605 8 HOH HOH . 
E 4 HOH A 6 606 9 HOH HOH . 
E 4 HOH A 7 607 13 HOH HOH . 
E 4 HOH A 8 608 14 HOH HOH . 
E 4 HOH A 9 609 15 HOH HOH . 
E 4 HOH A 10 610 16 HOH HOH . 
E 4 HOH A 11 611 18 HOH HOH . 
E 4 HOH A 12 612 20 HOH HOH . 
E 4 HOH A 13 613 21 HOH HOH . 
E 4 HOH A 14 614 22 HOH HOH . 
E 4 HOH A 15 615 24 HOH HOH . 
E 4 HOH A 16 616 27 HOH HOH . 
E 4 HOH A 17 617 29 HOH HOH . 
E 4 HOH A 18 618 32 HOH HOH . 
E 4 HOH A 19 619 35 HOH HOH . 
E 4 HOH A 20 620 36 HOH HOH . 
E 4 HOH A 21 621 37 HOH HOH . 
E 4 HOH A 22 622 38 HOH HOH . 
E 4 HOH A 23 623 41 HOH HOH . 
E 4 HOH A 24 624 42 HOH HOH . 
E 4 HOH A 25 625 44 HOH HOH . 
E 4 HOH A 26 626 45 HOH HOH . 
E 4 HOH A 27 627 48 HOH HOH . 
E 4 HOH A 28 628 52 HOH HOH . 
E 4 HOH A 29 629 54 HOH HOH . 
E 4 HOH A 30 630 55 HOH HOH . 
E 4 HOH A 31 631 56 HOH HOH . 
E 4 HOH A 32 632 57 HOH HOH . 
E 4 HOH A 33 633 58 HOH HOH . 
E 4 HOH A 34 634 59 HOH HOH . 
E 4 HOH A 35 635 62 HOH HOH . 
E 4 HOH A 36 636 65 HOH HOH . 
E 4 HOH A 37 637 66 HOH HOH . 
E 4 HOH A 38 638 68 HOH HOH . 
E 4 HOH A 39 639 69 HOH HOH . 
E 4 HOH A 40 640 70 HOH HOH . 
E 4 HOH A 41 641 72 HOH HOH . 
E 4 HOH A 42 642 74 HOH HOH . 
E 4 HOH A 43 643 75 HOH HOH . 
E 4 HOH A 44 644 76 HOH HOH . 
E 4 HOH A 45 645 80 HOH HOH . 
E 4 HOH A 46 646 81 HOH HOH . 
E 4 HOH A 47 647 83 HOH HOH . 
E 4 HOH A 48 648 85 HOH HOH . 
E 4 HOH A 49 649 88 HOH HOH . 
E 4 HOH A 50 650 89 HOH HOH . 
E 4 HOH A 51 651 90 HOH HOH . 
E 4 HOH A 52 652 91 HOH HOH . 
E 4 HOH A 53 653 97 HOH HOH . 
E 4 HOH A 54 654 102 HOH HOH . 
E 4 HOH A 55 655 104 HOH HOH . 
E 4 HOH A 56 656 109 HOH HOH . 
E 4 HOH A 57 657 112 HOH HOH . 
E 4 HOH A 58 658 114 HOH HOH . 
E 4 HOH A 59 659 122 HOH HOH . 
E 4 HOH A 60 660 127 HOH HOH . 
E 4 HOH A 61 661 129 HOH HOH . 
E 4 HOH A 62 662 136 HOH HOH . 
E 4 HOH A 63 663 143 HOH HOH . 
E 4 HOH A 64 664 149 HOH HOH . 
E 4 HOH A 65 665 150 HOH HOH . 
E 4 HOH A 66 666 152 HOH HOH . 
E 4 HOH A 67 667 155 HOH HOH . 
E 4 HOH A 68 668 165 HOH HOH . 
E 4 HOH A 69 669 166 HOH HOH . 
E 4 HOH A 70 670 167 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 3 -35.099 -26.921 6.269 1 66.99 ? C1 GOL 551 A 1 
HETATM 2 O O1 GOL . . . D 3 -35.572 -27.961 5.533 1 66.99 ? O1 GOL 551 A 1 
HETATM 3 C C2 GOL . . . D 3 -33.862 -27.124 7.153 1 66.99 ? C2 GOL 551 A 1 
HETATM 4 O O2 GOL . . . D 3 -33.536 -26.184 8.085 1 66.99 ? O2 GOL 551 A 1 
HETATM 5 C C3 GOL . . . D 3 -33.04 -28.402 7.016 1 66.99 ? C3 GOL 551 A 1 
HETATM 6 O O3 GOL . . . D 3 -31.766 -28.472 7.497 1 66.99 ? O3 GOL 551 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           275 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           6 
#