data_2ZSA # _model_server_result.job_id g8rsa5PKv6adwvjsVpCWgA _model_server_result.datetime_utc '2024-10-11 11:15:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2zsa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":726}' # _entry.id 2ZSA # _exptl.entry_id 2ZSA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 11 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2ZSA _cell.length_a 104.092 _cell.length_b 104.092 _cell.length_c 90.44 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ZSA _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_765 -x+2,-x+y+1,-z+1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 156.138 90.146316 30.146667 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 L N N ? 4 M N N ? 4 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 42 A GLU 42 1_555 Q NA NA . A NA 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? metalc ? metalc2 A O ALA 100 A ALA 100 1_555 Q NA NA . A NA 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.932 ? metalc ? metalc3 A OH TYR 223 A TYR 223 1_555 R NA NA . A NA 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.708 ? metalc ? metalc4 A OD1 ASP 225 A ASP 225 1_555 R NA NA . A NA 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? metalc ? metalc5 T O HOH . A HOH 337 1_555 R NA NA . A NA 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.916 ? metalc ? metalc6 T O HOH . A HOH 391 1_555 Q NA NA . A NA 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.722 ? metalc ? metalc7 T O HOH . A HOH 418 1_555 Q NA NA . A NA 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.843 ? metalc ? metalc8 T O HOH . A HOH 474 1_555 R NA NA . A NA 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.894 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 173 n n C1 C2 GOL sing 174 n n C1 H11 GOL sing 175 n n C1 H12 GOL sing 176 n n O1 HO1 GOL sing 177 n n C2 O2 GOL sing 178 n n C2 C3 GOL sing 179 n n C2 H2 GOL sing 180 n n O2 HO2 GOL sing 181 n n C3 O3 GOL sing 182 n n C3 H31 GOL sing 183 n n C3 H32 GOL sing 184 n n O3 HO3 GOL sing 185 n n # _atom_sites.entry_id 2ZSA _atom_sites.fract_transf_matrix[1][1] 0.009607 _atom_sites.fract_transf_matrix[1][2] 0.005547 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011093 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011057 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ADP A 1 800 800 ADP ADP . C 3 PAZ A 1 801 801 PAZ PAZ . D 4 GOL A 1 720 720 GOL GOL . E 4 GOL A 1 721 721 GOL GOL . F 4 GOL A 1 722 722 GOL GOL . G 4 GOL A 1 723 723 GOL GOL . H 4 GOL A 1 724 724 GOL GOL . I 4 GOL A 1 725 725 GOL GOL . J 4 GOL A 1 726 726 GOL GOL . K 4 GOL A 1 727 727 GOL GOL . L 4 GOL A 1 728 728 GOL GOL . M 4 GOL A 1 729 729 GOL GOL . N 4 GOL A 1 730 730 GOL GOL . O 5 CL A 1 701 701 CL CL . P 6 NA A 1 705 705 NA NA . Q 6 NA A 1 706 706 NA NA . R 6 NA A 1 707 707 NA NA . S 6 NA A 1 708 708 NA NA . T 7 HOH A 1 320 320 HOH HOH . T 7 HOH A 2 321 321 HOH HOH . T 7 HOH A 3 322 322 HOH HOH . T 7 HOH A 4 323 323 HOH HOH . T 7 HOH A 5 324 324 HOH HOH . T 7 HOH A 6 325 325 HOH HOH . T 7 HOH A 7 326 326 HOH HOH . T 7 HOH A 8 327 327 HOH HOH . T 7 HOH A 9 328 328 HOH HOH . T 7 HOH A 10 329 329 HOH HOH . T 7 HOH A 11 330 330 HOH HOH . T 7 HOH A 12 331 331 HOH HOH . T 7 HOH A 13 332 332 HOH HOH . T 7 HOH A 14 333 333 HOH HOH . T 7 HOH A 15 334 334 HOH HOH . T 7 HOH A 16 335 335 HOH HOH . T 7 HOH A 17 336 336 HOH HOH . T 7 HOH A 18 337 337 HOH HOH . T 7 HOH A 19 338 338 HOH HOH . T 7 HOH A 20 339 339 HOH HOH . T 7 HOH A 21 340 340 HOH HOH . T 7 HOH A 22 341 341 HOH HOH . T 7 HOH A 23 342 342 HOH HOH . T 7 HOH A 24 343 343 HOH HOH . T 7 HOH A 25 344 344 HOH HOH . T 7 HOH A 26 345 345 HOH HOH . T 7 HOH A 27 346 346 HOH HOH . T 7 HOH A 28 347 347 HOH HOH . T 7 HOH A 29 348 348 HOH HOH . T 7 HOH A 30 349 349 HOH HOH . T 7 HOH A 31 350 350 HOH HOH . T 7 HOH A 32 351 351 HOH HOH . T 7 HOH A 33 352 352 HOH HOH . T 7 HOH A 34 353 353 HOH HOH . T 7 HOH A 35 354 354 HOH HOH . T 7 HOH A 36 355 355 HOH HOH . T 7 HOH A 37 356 356 HOH HOH . T 7 HOH A 38 357 357 HOH HOH . T 7 HOH A 39 358 358 HOH HOH . T 7 HOH A 40 359 359 HOH HOH . T 7 HOH A 41 360 360 HOH HOH . T 7 HOH A 42 361 361 HOH HOH . T 7 HOH A 43 362 362 HOH HOH . T 7 HOH A 44 363 363 HOH HOH . T 7 HOH A 45 364 364 HOH HOH . T 7 HOH A 46 365 365 HOH HOH . T 7 HOH A 47 366 366 HOH HOH . T 7 HOH A 48 367 367 HOH HOH . T 7 HOH A 49 368 368 HOH HOH . T 7 HOH A 50 369 369 HOH HOH . T 7 HOH A 51 370 370 HOH HOH . T 7 HOH A 52 371 371 HOH HOH . T 7 HOH A 53 372 372 HOH HOH . T 7 HOH A 54 373 373 HOH HOH . T 7 HOH A 55 374 374 HOH HOH . T 7 HOH A 56 375 375 HOH HOH . T 7 HOH A 57 376 376 HOH HOH . T 7 HOH A 58 377 377 HOH HOH . T 7 HOH A 59 378 378 HOH HOH . T 7 HOH A 60 379 379 HOH HOH . T 7 HOH A 61 380 380 HOH HOH . T 7 HOH A 62 381 381 HOH HOH . T 7 HOH A 63 382 382 HOH HOH . T 7 HOH A 64 383 383 HOH HOH . T 7 HOH A 65 384 384 HOH HOH . T 7 HOH A 66 385 385 HOH HOH . T 7 HOH A 67 386 386 HOH HOH . T 7 HOH A 68 387 387 HOH HOH . T 7 HOH A 69 388 388 HOH HOH . T 7 HOH A 70 389 389 HOH HOH . T 7 HOH A 71 390 390 HOH HOH . T 7 HOH A 72 391 391 HOH HOH . T 7 HOH A 73 392 392 HOH HOH . T 7 HOH A 74 393 393 HOH HOH . T 7 HOH A 75 394 394 HOH HOH . T 7 HOH A 76 395 395 HOH HOH . T 7 HOH A 77 396 396 HOH HOH . T 7 HOH A 78 397 397 HOH HOH . T 7 HOH A 79 398 398 HOH HOH . T 7 HOH A 80 399 399 HOH HOH . T 7 HOH A 81 400 400 HOH HOH . T 7 HOH A 82 401 401 HOH HOH . T 7 HOH A 83 402 402 HOH HOH . T 7 HOH A 84 403 403 HOH HOH . T 7 HOH A 85 404 404 HOH HOH . T 7 HOH A 86 405 405 HOH HOH . T 7 HOH A 87 406 406 HOH HOH . T 7 HOH A 88 407 407 HOH HOH . T 7 HOH A 89 408 408 HOH HOH . T 7 HOH A 90 409 409 HOH HOH . T 7 HOH A 91 410 410 HOH HOH . T 7 HOH A 92 411 411 HOH HOH . T 7 HOH A 93 412 412 HOH HOH . T 7 HOH A 94 413 413 HOH HOH . T 7 HOH A 95 414 414 HOH HOH . T 7 HOH A 96 415 415 HOH HOH . T 7 HOH A 97 416 416 HOH HOH . T 7 HOH A 98 417 417 HOH HOH . T 7 HOH A 99 418 418 HOH HOH . T 7 HOH A 100 419 419 HOH HOH . T 7 HOH A 101 420 420 HOH HOH . T 7 HOH A 102 421 421 HOH HOH . T 7 HOH A 103 422 422 HOH HOH . T 7 HOH A 104 423 423 HOH HOH . T 7 HOH A 105 424 424 HOH HOH . T 7 HOH A 106 425 425 HOH HOH . T 7 HOH A 107 426 426 HOH HOH . T 7 HOH A 108 427 427 HOH HOH . T 7 HOH A 109 428 428 HOH HOH . T 7 HOH A 110 429 429 HOH HOH . T 7 HOH A 111 430 430 HOH HOH . T 7 HOH A 112 431 431 HOH HOH . T 7 HOH A 113 432 432 HOH HOH . T 7 HOH A 114 433 433 HOH HOH . T 7 HOH A 115 434 434 HOH HOH . T 7 HOH A 116 435 435 HOH HOH . T 7 HOH A 117 436 436 HOH HOH . T 7 HOH A 118 437 437 HOH HOH . T 7 HOH A 119 438 438 HOH HOH . T 7 HOH A 120 439 439 HOH HOH . T 7 HOH A 121 440 440 HOH HOH . T 7 HOH A 122 441 441 HOH HOH . T 7 HOH A 123 442 442 HOH HOH . T 7 HOH A 124 443 443 HOH HOH . T 7 HOH A 125 444 444 HOH HOH . T 7 HOH A 126 445 445 HOH HOH . T 7 HOH A 127 446 446 HOH HOH . T 7 HOH A 128 447 447 HOH HOH . T 7 HOH A 129 448 448 HOH HOH . T 7 HOH A 130 449 449 HOH HOH . T 7 HOH A 131 450 450 HOH HOH . T 7 HOH A 132 451 451 HOH HOH . T 7 HOH A 133 452 452 HOH HOH . T 7 HOH A 134 453 453 HOH HOH . T 7 HOH A 135 454 454 HOH HOH . T 7 HOH A 136 455 455 HOH HOH . T 7 HOH A 137 456 456 HOH HOH . T 7 HOH A 138 457 457 HOH HOH . T 7 HOH A 139 458 458 HOH HOH . T 7 HOH A 140 459 459 HOH HOH . T 7 HOH A 141 460 460 HOH HOH . T 7 HOH A 142 461 461 HOH HOH . T 7 HOH A 143 462 462 HOH HOH . T 7 HOH A 144 463 463 HOH HOH . T 7 HOH A 145 464 464 HOH HOH . T 7 HOH A 146 465 465 HOH HOH . T 7 HOH A 147 466 466 HOH HOH . T 7 HOH A 148 467 467 HOH HOH . T 7 HOH A 149 468 468 HOH HOH . T 7 HOH A 150 469 469 HOH HOH . T 7 HOH A 151 470 470 HOH HOH . T 7 HOH A 152 471 471 HOH HOH . T 7 HOH A 153 472 472 HOH HOH . T 7 HOH A 154 473 473 HOH HOH . T 7 HOH A 155 474 474 HOH HOH . T 7 HOH A 156 475 475 HOH HOH . T 7 HOH A 157 476 476 HOH HOH . T 7 HOH A 158 477 477 HOH HOH . T 7 HOH A 159 478 478 HOH HOH . T 7 HOH A 160 479 479 HOH HOH . T 7 HOH A 161 480 480 HOH HOH . T 7 HOH A 162 481 481 HOH HOH . T 7 HOH A 163 482 482 HOH HOH . T 7 HOH A 164 483 483 HOH HOH . T 7 HOH A 165 484 484 HOH HOH . T 7 HOH A 166 485 485 HOH HOH . T 7 HOH A 167 486 486 HOH HOH . T 7 HOH A 168 487 487 HOH HOH . T 7 HOH A 169 488 488 HOH HOH . T 7 HOH A 170 489 489 HOH HOH . T 7 HOH A 171 490 490 HOH HOH . T 7 HOH A 172 491 491 HOH HOH . T 7 HOH A 173 492 492 HOH HOH . T 7 HOH A 174 493 493 HOH HOH . T 7 HOH A 175 494 494 HOH HOH . T 7 HOH A 176 495 495 HOH HOH . T 7 HOH A 177 496 496 HOH HOH . T 7 HOH A 178 497 497 HOH HOH . T 7 HOH A 179 498 498 HOH HOH . T 7 HOH A 180 499 499 HOH HOH . T 7 HOH A 181 500 500 HOH HOH . T 7 HOH A 182 501 501 HOH HOH . T 7 HOH A 183 502 502 HOH HOH . T 7 HOH A 184 503 503 HOH HOH . T 7 HOH A 185 504 504 HOH HOH . T 7 HOH A 186 505 505 HOH HOH . T 7 HOH A 187 506 506 HOH HOH . T 7 HOH A 188 507 507 HOH HOH . T 7 HOH A 189 508 508 HOH HOH . T 7 HOH A 190 509 509 HOH HOH . T 7 HOH A 191 510 510 HOH HOH . T 7 HOH A 192 511 511 HOH HOH . T 7 HOH A 193 512 512 HOH HOH . T 7 HOH A 194 513 513 HOH HOH . T 7 HOH A 195 514 514 HOH HOH . T 7 HOH A 196 515 515 HOH HOH . T 7 HOH A 197 516 516 HOH HOH . T 7 HOH A 198 517 517 HOH HOH . T 7 HOH A 199 518 518 HOH HOH . T 7 HOH A 200 519 519 HOH HOH . T 7 HOH A 201 520 520 HOH HOH . T 7 HOH A 202 521 521 HOH HOH . T 7 HOH A 203 522 522 HOH HOH . T 7 HOH A 204 523 523 HOH HOH . T 7 HOH A 205 524 524 HOH HOH . T 7 HOH A 206 525 525 HOH HOH . T 7 HOH A 207 526 526 HOH HOH . T 7 HOH A 208 527 527 HOH HOH . T 7 HOH A 209 528 528 HOH HOH . T 7 HOH A 210 529 529 HOH HOH . T 7 HOH A 211 530 530 HOH HOH . T 7 HOH A 212 531 531 HOH HOH . T 7 HOH A 213 532 532 HOH HOH . T 7 HOH A 214 533 533 HOH HOH . T 7 HOH A 215 534 534 HOH HOH . T 7 HOH A 216 535 535 HOH HOH . T 7 HOH A 217 536 536 HOH HOH . T 7 HOH A 218 537 537 HOH HOH . T 7 HOH A 219 538 538 HOH HOH . T 7 HOH A 220 539 539 HOH HOH . T 7 HOH A 221 540 540 HOH HOH . T 7 HOH A 222 541 541 HOH HOH . T 7 HOH A 223 542 542 HOH HOH . T 7 HOH A 224 543 543 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . J 4 75.26 27.731 -15.255 1 100.83 ? C1 GOL 726 A 1 HETATM 2 O O1 GOL . . . J 4 74.153 28.2 -16.03 1 99.83 ? O1 GOL 726 A 1 HETATM 3 C C2 GOL . . . J 4 74.781 26.702 -14.229 1 101.07 ? C2 GOL 726 A 1 HETATM 4 O O2 GOL . . . J 4 74.235 25.567 -14.907 1 101.22 ? O2 GOL 726 A 1 HETATM 5 C C3 GOL . . . J 4 75.964 26.257 -13.366 1 101.45 ? C3 GOL 726 A 1 HETATM 6 O O3 GOL . . . J 4 76.987 25.696 -14.193 1 101.26 ? O3 GOL 726 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #