data_2ZSE # _model_server_result.job_id TsR_9Jin5LRz0a_DpLyPdA _model_server_result.datetime_utc '2024-10-11 13:30:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2zse # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":805}' # _entry.id 2ZSE # _exptl.entry_id 2ZSE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2ZSE _cell.length_a 102.942 _cell.length_b 102.942 _cell.length_c 91.23 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ZSE _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_765 -x+2,-x+y+1,-z+1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 154.413 89.150387 30.41 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 124 A ASP 124 1_555 Q NA NA . A NA 950 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.054 ? metalc ? metalc2 A OD1 ASP 124 A ASP 124 1_555 Q NA NA . A NA 950 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.189 ? metalc ? metalc3 A O LEU 312 A LEU 312 1_555 R NA NA . A NA 951 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.604 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 206 n n C1 C2 GOL sing 207 n n C1 H11 GOL sing 208 n n C1 H12 GOL sing 209 n n O1 HO1 GOL sing 210 n n C2 O2 GOL sing 211 n n C2 C3 GOL sing 212 n n C2 H2 GOL sing 213 n n O2 HO2 GOL sing 214 n n C3 O3 GOL sing 215 n n C3 H31 GOL sing 216 n n C3 H32 GOL sing 217 n n O3 HO3 GOL sing 218 n n # _atom_sites.entry_id 2ZSE _atom_sites.fract_transf_matrix[1][1] 0.009714 _atom_sites.fract_transf_matrix[1][2] 0.005609 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011217 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010961 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACP A 1 500 500 ACP ACP . C 3 PAU A 1 600 600 PAU PAU . D 4 GOL A 1 800 800 GOL GOL . E 4 GOL A 1 801 801 GOL GOL . F 4 GOL A 1 802 802 GOL GOL . G 4 GOL A 1 803 803 GOL GOL . H 4 GOL A 1 805 805 GOL GOL . I 4 GOL A 1 806 806 GOL GOL . J 5 EDO A 1 900 900 EDO EDO . K 5 EDO A 1 901 901 EDO EDO . L 5 EDO A 1 902 902 EDO EDO . M 5 EDO A 1 903 903 EDO EDO . N 5 EDO A 1 904 904 EDO EDO . O 5 EDO A 1 905 905 EDO EDO . P 6 FLC A 1 650 650 FLC FLC . Q 7 NA A 1 950 950 NA NA . R 7 NA A 1 951 951 NA NA . S 8 HOH A 1 320 320 HOH HOH . S 8 HOH A 2 321 321 HOH HOH . S 8 HOH A 3 322 322 HOH HOH . S 8 HOH A 4 323 323 HOH HOH . S 8 HOH A 5 324 324 HOH HOH . S 8 HOH A 6 325 325 HOH HOH . S 8 HOH A 7 326 326 HOH HOH . S 8 HOH A 8 327 327 HOH HOH . S 8 HOH A 9 328 328 HOH HOH . S 8 HOH A 10 329 329 HOH HOH . S 8 HOH A 11 330 330 HOH HOH . S 8 HOH A 12 331 331 HOH HOH . S 8 HOH A 13 332 332 HOH HOH . S 8 HOH A 14 333 333 HOH HOH . S 8 HOH A 15 334 334 HOH HOH . S 8 HOH A 16 335 335 HOH HOH . S 8 HOH A 17 336 336 HOH HOH . S 8 HOH A 18 337 337 HOH HOH . S 8 HOH A 19 338 338 HOH HOH . S 8 HOH A 20 339 339 HOH HOH . S 8 HOH A 21 340 340 HOH HOH . S 8 HOH A 22 341 341 HOH HOH . S 8 HOH A 23 342 342 HOH HOH . S 8 HOH A 24 343 343 HOH HOH . S 8 HOH A 25 344 344 HOH HOH . S 8 HOH A 26 345 345 HOH HOH . S 8 HOH A 27 346 346 HOH HOH . S 8 HOH A 28 347 347 HOH HOH . S 8 HOH A 29 348 348 HOH HOH . S 8 HOH A 30 349 349 HOH HOH . S 8 HOH A 31 350 350 HOH HOH . S 8 HOH A 32 351 351 HOH HOH . S 8 HOH A 33 352 352 HOH HOH . S 8 HOH A 34 353 353 HOH HOH . S 8 HOH A 35 354 354 HOH HOH . S 8 HOH A 36 355 355 HOH HOH . S 8 HOH A 37 356 356 HOH HOH . S 8 HOH A 38 357 357 HOH HOH . S 8 HOH A 39 358 358 HOH HOH . S 8 HOH A 40 359 359 HOH HOH . S 8 HOH A 41 360 360 HOH HOH . S 8 HOH A 42 361 361 HOH HOH . S 8 HOH A 43 362 362 HOH HOH . S 8 HOH A 44 363 363 HOH HOH . S 8 HOH A 45 364 364 HOH HOH . S 8 HOH A 46 365 365 HOH HOH . S 8 HOH A 47 366 366 HOH HOH . S 8 HOH A 48 367 367 HOH HOH . S 8 HOH A 49 368 368 HOH HOH . S 8 HOH A 50 369 369 HOH HOH . S 8 HOH A 51 370 370 HOH HOH . S 8 HOH A 52 371 371 HOH HOH . S 8 HOH A 53 372 372 HOH HOH . S 8 HOH A 54 373 373 HOH HOH . S 8 HOH A 55 374 374 HOH HOH . S 8 HOH A 56 375 375 HOH HOH . S 8 HOH A 57 376 376 HOH HOH . S 8 HOH A 58 377 377 HOH HOH . S 8 HOH A 59 378 378 HOH HOH . S 8 HOH A 60 379 379 HOH HOH . S 8 HOH A 61 380 380 HOH HOH . S 8 HOH A 62 381 381 HOH HOH . S 8 HOH A 63 382 382 HOH HOH . S 8 HOH A 64 383 383 HOH HOH . S 8 HOH A 65 384 384 HOH HOH . S 8 HOH A 66 385 385 HOH HOH . S 8 HOH A 67 386 386 HOH HOH . S 8 HOH A 68 387 387 HOH HOH . S 8 HOH A 69 388 388 HOH HOH . S 8 HOH A 70 389 389 HOH HOH . S 8 HOH A 71 390 390 HOH HOH . S 8 HOH A 72 391 391 HOH HOH . S 8 HOH A 73 392 392 HOH HOH . S 8 HOH A 74 393 393 HOH HOH . S 8 HOH A 75 394 394 HOH HOH . S 8 HOH A 76 395 395 HOH HOH . S 8 HOH A 77 396 396 HOH HOH . S 8 HOH A 78 397 397 HOH HOH . S 8 HOH A 79 398 398 HOH HOH . S 8 HOH A 80 399 399 HOH HOH . S 8 HOH A 81 400 400 HOH HOH . S 8 HOH A 82 401 401 HOH HOH . S 8 HOH A 83 402 402 HOH HOH . S 8 HOH A 84 403 403 HOH HOH . S 8 HOH A 85 404 404 HOH HOH . S 8 HOH A 86 405 405 HOH HOH . S 8 HOH A 87 406 406 HOH HOH . S 8 HOH A 88 407 407 HOH HOH . S 8 HOH A 89 408 408 HOH HOH . S 8 HOH A 90 409 409 HOH HOH . S 8 HOH A 91 410 410 HOH HOH . S 8 HOH A 92 411 411 HOH HOH . S 8 HOH A 93 412 412 HOH HOH . S 8 HOH A 94 413 413 HOH HOH . S 8 HOH A 95 414 414 HOH HOH . S 8 HOH A 96 415 415 HOH HOH . S 8 HOH A 97 416 416 HOH HOH . S 8 HOH A 98 417 417 HOH HOH . S 8 HOH A 99 418 418 HOH HOH . S 8 HOH A 100 419 419 HOH HOH . S 8 HOH A 101 420 420 HOH HOH . S 8 HOH A 102 421 421 HOH HOH . S 8 HOH A 103 422 422 HOH HOH . S 8 HOH A 104 423 423 HOH HOH . S 8 HOH A 105 424 424 HOH HOH . S 8 HOH A 106 425 425 HOH HOH . S 8 HOH A 107 426 426 HOH HOH . S 8 HOH A 108 427 427 HOH HOH . S 8 HOH A 109 428 428 HOH HOH . S 8 HOH A 110 429 429 HOH HOH . S 8 HOH A 111 430 430 HOH HOH . S 8 HOH A 112 431 431 HOH HOH . S 8 HOH A 113 432 432 HOH HOH . S 8 HOH A 114 433 433 HOH HOH . S 8 HOH A 115 434 434 HOH HOH . S 8 HOH A 116 435 435 HOH HOH . S 8 HOH A 117 436 436 HOH HOH . S 8 HOH A 118 437 437 HOH HOH . S 8 HOH A 119 438 438 HOH HOH . S 8 HOH A 120 439 439 HOH HOH . S 8 HOH A 121 440 440 HOH HOH . S 8 HOH A 122 442 442 HOH HOH . S 8 HOH A 123 443 443 HOH HOH . S 8 HOH A 124 444 444 HOH HOH . S 8 HOH A 125 445 445 HOH HOH . S 8 HOH A 126 446 446 HOH HOH . S 8 HOH A 127 447 447 HOH HOH . S 8 HOH A 128 448 448 HOH HOH . S 8 HOH A 129 449 449 HOH HOH . S 8 HOH A 130 450 450 HOH HOH . S 8 HOH A 131 451 451 HOH HOH . S 8 HOH A 132 452 452 HOH HOH . S 8 HOH A 133 453 453 HOH HOH . S 8 HOH A 134 454 454 HOH HOH . S 8 HOH A 135 455 455 HOH HOH . S 8 HOH A 136 456 456 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . H 4 78.346 0.583 8.038 1 111.01 ? C1 GOL 805 A 1 HETATM 2 O O1 GOL . . . H 4 77.186 -0.233 7.854 1 111.13 ? O1 GOL 805 A 1 HETATM 3 C C2 GOL . . . H 4 79.011 0.853 6.687 1 111.18 ? C2 GOL 805 A 1 HETATM 4 O O2 GOL . . . H 4 78.096 1.541 5.829 1 111.08 ? O2 GOL 805 A 1 HETATM 5 C C3 GOL . . . H 4 79.423 -0.472 6.041 1 110.78 ? C3 GOL 805 A 1 HETATM 6 O O3 GOL . . . H 4 80.064 -0.212 4.789 1 109.7 ? O3 GOL 805 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #