data_2ZT7 # _model_server_result.job_id hRT2beD-7onaoN595tuDHQ _model_server_result.datetime_utc '2024-11-23 12:24:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2zt7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1200}' # _entry.id 2ZT7 # _exptl.entry_id 2ZT7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 507.181 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-5'-TRIPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2ZT7 _cell.length_a 116.526 _cell.length_b 139.748 _cell.length_c 132.404 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ZT7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_556 x,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 132.404 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H16 N5 O13 P3' _chem_comp.formula_weight 507.181 _chem_comp.id ATP _chem_comp.mon_nstd_flag . _chem_comp.name "ADENOSINE-5'-TRIPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PG O1G ATP doub 70 n n PG O2G ATP sing 71 n n PG O3G ATP sing 72 n n PG O3B ATP sing 73 n n O2G HOG2 ATP sing 74 n n O3G HOG3 ATP sing 75 n n PB O1B ATP doub 76 n n PB O2B ATP sing 77 n n PB O3B ATP sing 78 n n PB O3A ATP sing 79 n n O2B HOB2 ATP sing 80 n n PA O1A ATP doub 81 n n PA O2A ATP sing 82 n n PA O3A ATP sing 83 n n PA O5' ATP sing 84 n n O2A HOA2 ATP sing 85 n n O5' C5' ATP sing 86 n n C5' C4' ATP sing 87 n n C5' "H5'1" ATP sing 88 n n C5' "H5'2" ATP sing 89 n n C4' O4' ATP sing 90 n n C4' C3' ATP sing 91 n n C4' H4' ATP sing 92 n n O4' C1' ATP sing 93 n n C3' O3' ATP sing 94 n n C3' C2' ATP sing 95 n n C3' H3' ATP sing 96 n n O3' HO3' ATP sing 97 n n C2' O2' ATP sing 98 n n C2' C1' ATP sing 99 n n C2' H2' ATP sing 100 n n O2' HO2' ATP sing 101 n n C1' N9 ATP sing 102 n n C1' H1' ATP sing 103 n n N9 C8 ATP sing 104 n y N9 C4 ATP sing 105 n y C8 N7 ATP doub 106 n y C8 H8 ATP sing 107 n n N7 C5 ATP sing 108 n y C5 C6 ATP sing 109 n y C5 C4 ATP doub 110 n y C6 N6 ATP sing 111 n n C6 N1 ATP doub 112 n y N6 HN61 ATP sing 113 n n N6 HN62 ATP sing 114 n n N1 C2 ATP sing 115 n y C2 N3 ATP doub 116 n y C2 H2 ATP sing 117 n n N3 C4 ATP sing 118 n y # _atom_sites.entry_id 2ZT7 _atom_sites.fract_transf_matrix[1][1] 0.008582 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007156 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007553 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GLY A 1 1300 1300 GLY GLY . C 3 ATP A 1 1200 1200 ATP DRG . D 4 HOH A 1 700 700 HOH WAT . D 4 HOH A 2 701 701 HOH WAT . D 4 HOH A 3 702 702 HOH WAT . D 4 HOH A 4 703 703 HOH WAT . D 4 HOH A 5 704 704 HOH WAT . D 4 HOH A 6 705 705 HOH WAT . D 4 HOH A 7 706 706 HOH WAT . D 4 HOH A 8 707 707 HOH WAT . D 4 HOH A 9 708 708 HOH WAT . D 4 HOH A 10 709 709 HOH WAT . D 4 HOH A 11 710 710 HOH WAT . D 4 HOH A 12 711 711 HOH WAT . D 4 HOH A 13 712 712 HOH WAT . D 4 HOH A 14 713 713 HOH WAT . D 4 HOH A 15 714 714 HOH WAT . D 4 HOH A 16 715 715 HOH WAT . D 4 HOH A 17 716 716 HOH WAT . D 4 HOH A 18 717 717 HOH WAT . D 4 HOH A 19 718 718 HOH WAT . D 4 HOH A 20 719 719 HOH WAT . D 4 HOH A 21 720 720 HOH WAT . D 4 HOH A 22 721 721 HOH WAT . D 4 HOH A 23 722 722 HOH WAT . D 4 HOH A 24 723 723 HOH WAT . D 4 HOH A 25 724 724 HOH WAT . D 4 HOH A 26 725 725 HOH WAT . D 4 HOH A 27 726 726 HOH WAT . D 4 HOH A 28 727 727 HOH WAT . D 4 HOH A 29 728 728 HOH WAT . D 4 HOH A 30 729 729 HOH WAT . D 4 HOH A 31 730 730 HOH WAT . D 4 HOH A 32 731 731 HOH WAT . D 4 HOH A 33 732 732 HOH WAT . D 4 HOH A 34 733 733 HOH WAT . D 4 HOH A 35 734 734 HOH WAT . D 4 HOH A 36 735 735 HOH WAT . D 4 HOH A 37 736 736 HOH WAT . D 4 HOH A 38 737 737 HOH WAT . D 4 HOH A 39 738 738 HOH WAT . D 4 HOH A 40 739 739 HOH WAT . D 4 HOH A 41 740 740 HOH WAT . D 4 HOH A 42 741 741 HOH WAT . D 4 HOH A 43 742 742 HOH WAT . D 4 HOH A 44 743 743 HOH WAT . D 4 HOH A 45 744 744 HOH WAT . D 4 HOH A 46 745 745 HOH WAT . D 4 HOH A 47 746 746 HOH WAT . D 4 HOH A 48 747 747 HOH WAT . D 4 HOH A 49 748 748 HOH WAT . D 4 HOH A 50 749 749 HOH WAT . D 4 HOH A 51 750 750 HOH WAT . D 4 HOH A 52 751 751 HOH WAT . D 4 HOH A 53 752 752 HOH WAT . D 4 HOH A 54 753 753 HOH WAT . D 4 HOH A 55 754 754 HOH WAT . D 4 HOH A 56 755 755 HOH WAT . D 4 HOH A 57 756 756 HOH WAT . D 4 HOH A 58 757 757 HOH WAT . D 4 HOH A 59 758 758 HOH WAT . D 4 HOH A 60 759 759 HOH WAT . D 4 HOH A 61 760 760 HOH WAT . D 4 HOH A 62 761 761 HOH WAT . D 4 HOH A 63 762 762 HOH WAT . D 4 HOH A 64 763 763 HOH WAT . D 4 HOH A 65 764 764 HOH WAT . D 4 HOH A 66 765 765 HOH WAT . D 4 HOH A 67 766 766 HOH WAT . D 4 HOH A 68 767 767 HOH WAT . D 4 HOH A 69 768 768 HOH WAT . D 4 HOH A 70 769 769 HOH WAT . D 4 HOH A 71 770 770 HOH WAT . D 4 HOH A 72 771 771 HOH WAT . D 4 HOH A 73 772 772 HOH WAT . D 4 HOH A 74 773 773 HOH WAT . D 4 HOH A 75 774 774 HOH WAT . D 4 HOH A 76 775 775 HOH WAT . D 4 HOH A 77 776 776 HOH WAT . D 4 HOH A 78 777 777 HOH WAT . D 4 HOH A 79 778 778 HOH WAT . D 4 HOH A 80 779 779 HOH WAT . D 4 HOH A 81 780 780 HOH WAT . D 4 HOH A 82 781 781 HOH WAT . D 4 HOH A 83 782 782 HOH WAT . D 4 HOH A 84 783 783 HOH WAT . D 4 HOH A 85 784 784 HOH WAT . D 4 HOH A 86 785 785 HOH WAT . D 4 HOH A 87 786 786 HOH WAT . D 4 HOH A 88 787 787 HOH WAT . D 4 HOH A 89 788 788 HOH WAT . D 4 HOH A 90 789 789 HOH WAT . D 4 HOH A 91 790 790 HOH WAT . D 4 HOH A 92 791 791 HOH WAT . D 4 HOH A 93 792 792 HOH WAT . D 4 HOH A 94 793 793 HOH WAT . D 4 HOH A 95 794 794 HOH WAT . D 4 HOH A 96 795 795 HOH WAT . D 4 HOH A 97 796 796 HOH WAT . D 4 HOH A 98 797 797 HOH WAT . D 4 HOH A 99 798 798 HOH WAT . D 4 HOH A 100 799 799 HOH WAT . D 4 HOH A 101 800 800 HOH WAT . D 4 HOH A 102 801 801 HOH WAT . D 4 HOH A 103 802 802 HOH WAT . D 4 HOH A 104 803 803 HOH WAT . D 4 HOH A 105 805 805 HOH WAT . D 4 HOH A 106 806 806 HOH WAT . D 4 HOH A 107 807 807 HOH WAT . D 4 HOH A 108 810 810 HOH WAT . D 4 HOH A 109 811 811 HOH WAT . D 4 HOH A 110 812 812 HOH WAT . D 4 HOH A 111 813 813 HOH WAT . D 4 HOH A 112 814 814 HOH WAT . D 4 HOH A 113 815 815 HOH WAT . D 4 HOH A 114 816 816 HOH WAT . D 4 HOH A 115 818 818 HOH WAT . D 4 HOH A 116 819 819 HOH WAT . D 4 HOH A 117 821 821 HOH WAT . D 4 HOH A 118 822 822 HOH WAT . D 4 HOH A 119 823 823 HOH WAT . D 4 HOH A 120 824 824 HOH WAT . D 4 HOH A 121 825 825 HOH WAT . D 4 HOH A 122 826 826 HOH WAT . D 4 HOH A 123 827 827 HOH WAT . D 4 HOH A 124 828 828 HOH WAT . D 4 HOH A 125 829 829 HOH WAT . D 4 HOH A 126 830 830 HOH WAT . D 4 HOH A 127 831 831 HOH WAT . D 4 HOH A 128 832 832 HOH WAT . D 4 HOH A 129 835 835 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG ATP . . . C 3 31.746 -18.063 73.89 1 89.05 ? PG ATP 1200 A 1 HETATM 2 O O1G ATP . . . C 3 30.991 -18.565 72.561 1 85.89 ? O1G ATP 1200 A 1 HETATM 3 O O2G ATP . . . C 3 32.964 -17.283 73.577 1 85.68 ? O2G ATP 1200 A 1 HETATM 4 O O3G ATP . . . C 3 32.083 -19.393 74.73 1 86.89 ? O3G ATP 1200 A 1 HETATM 5 P PB ATP . . . C 3 31.138 -16.155 75.834 1 89.81 ? PB ATP 1200 A 1 HETATM 6 O O1B ATP . . . C 3 30.911 -16.85 77.269 1 88.05 ? O1B ATP 1200 A 1 HETATM 7 O O2B ATP . . . C 3 32.536 -15.718 75.626 1 87.6 ? O2B ATP 1200 A 1 HETATM 8 O O3B ATP . . . C 3 30.66 -17.243 74.749 1 88.6 ? O3B ATP 1200 A 1 HETATM 9 P PA ATP . . . C 3 29.565 -14.247 77.121 1 81.72 ? PA ATP 1200 A 1 HETATM 10 O O1A ATP . . . C 3 30.829 -13.44 77.711 1 82.49 ? O1A ATP 1200 A 1 HETATM 11 O O2A ATP . . . C 3 29.049 -15.247 78.084 1 82.97 ? O2A ATP 1200 A 1 HETATM 12 O O3A ATP . . . C 3 30.088 -14.935 75.76 1 86.04 ? O3A ATP 1200 A 1 HETATM 13 O O5' ATP . . . C 3 28.474 -13.128 76.726 1 79.48 ? O5' ATP 1200 A 1 HETATM 14 C C5' ATP . . . C 3 27.151 -13.522 76.35 1 79.9 ? C5' ATP 1200 A 1 HETATM 15 C C4' ATP . . . C 3 27.156 -14.072 74.923 1 77.51 ? C4' ATP 1200 A 1 HETATM 16 O O4' ATP . . . C 3 27.343 -13.019 73.965 1 73.97 ? O4' ATP 1200 A 1 HETATM 17 C C3' ATP . . . C 3 25.833 -14.661 74.44 1 76.69 ? C3' ATP 1200 A 1 HETATM 18 O O3' ATP . . . C 3 25.568 -15.888 75.126 1 79.73 ? O3' ATP 1200 A 1 HETATM 19 C C2' ATP . . . C 3 26.25 -14.899 72.991 1 75.1 ? C2' ATP 1200 A 1 HETATM 20 O O2' ATP . . . C 3 25.083 -14.994 72.172 1 78.29 ? O2' ATP 1200 A 1 HETATM 21 C C1' ATP . . . C 3 26.986 -13.589 72.692 1 73.4 ? C1' ATP 1200 A 1 HETATM 22 N N9 ATP . . . C 3 28.218 -13.836 71.911 1 72.25 ? N9 ATP 1200 A 1 HETATM 23 C C8 ATP . . . C 3 29.439 -13.986 72.423 1 70.02 ? C8 ATP 1200 A 1 HETATM 24 N N7 ATP . . . C 3 30.325 -14.111 71.439 1 70.12 ? N7 ATP 1200 A 1 HETATM 25 C C5 ATP . . . C 3 29.663 -14.043 70.286 1 70.61 ? C5 ATP 1200 A 1 HETATM 26 C C6 ATP . . . C 3 30.043 -14.095 68.953 1 70.24 ? C6 ATP 1200 A 1 HETATM 27 N N6 ATP . . . C 3 31.324 -14.228 68.62 1 68.19 ? N6 ATP 1200 A 1 HETATM 28 N N1 ATP . . . C 3 29.099 -13.987 68.006 1 71.37 ? N1 ATP 1200 A 1 HETATM 29 C C2 ATP . . . C 3 27.826 -13.833 68.328 1 71.61 ? C2 ATP 1200 A 1 HETATM 30 N N3 ATP . . . C 3 27.43 -13.775 69.588 1 70.62 ? N3 ATP 1200 A 1 HETATM 31 C C4 ATP . . . C 3 28.319 -13.874 70.586 1 70.95 ? C4 ATP 1200 A 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 258 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 31 #