data_2ZT7 # _model_server_result.job_id jGjwnQPMYtzK-0SehCL6Kw _model_server_result.datetime_utc '2024-11-27 04:06:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2zt7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1300}' # _entry.id 2ZT7 # _exptl.entry_id 2ZT7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 75.067 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2ZT7 _cell.length_a 116.526 _cell.length_b 139.748 _cell.length_c 132.404 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ZT7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_556 x,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 132.404 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H5 N O2' _chem_comp.formula_weight 75.067 _chem_comp.id GLY _chem_comp.mon_nstd_flag y _chem_comp.name GLYCINE _chem_comp.type 'peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA GLY sing 169 n n N H GLY sing 170 n n N H2 GLY sing 171 n n CA C GLY sing 172 n n CA HA2 GLY sing 173 n n CA HA3 GLY sing 174 n n C O GLY doub 175 n n C OXT GLY sing 176 n n OXT HXT GLY sing 177 n n # _atom_sites.entry_id 2ZT7 _atom_sites.fract_transf_matrix[1][1] 0.008582 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007156 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007553 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GLY A 1 1300 1300 GLY GLY . C 3 ATP A 1 1200 1200 ATP DRG . D 4 HOH A 1 700 700 HOH WAT . D 4 HOH A 2 701 701 HOH WAT . D 4 HOH A 3 702 702 HOH WAT . D 4 HOH A 4 703 703 HOH WAT . D 4 HOH A 5 704 704 HOH WAT . D 4 HOH A 6 705 705 HOH WAT . D 4 HOH A 7 706 706 HOH WAT . D 4 HOH A 8 707 707 HOH WAT . D 4 HOH A 9 708 708 HOH WAT . D 4 HOH A 10 709 709 HOH WAT . D 4 HOH A 11 710 710 HOH WAT . D 4 HOH A 12 711 711 HOH WAT . D 4 HOH A 13 712 712 HOH WAT . D 4 HOH A 14 713 713 HOH WAT . D 4 HOH A 15 714 714 HOH WAT . D 4 HOH A 16 715 715 HOH WAT . D 4 HOH A 17 716 716 HOH WAT . D 4 HOH A 18 717 717 HOH WAT . D 4 HOH A 19 718 718 HOH WAT . D 4 HOH A 20 719 719 HOH WAT . D 4 HOH A 21 720 720 HOH WAT . D 4 HOH A 22 721 721 HOH WAT . D 4 HOH A 23 722 722 HOH WAT . D 4 HOH A 24 723 723 HOH WAT . D 4 HOH A 25 724 724 HOH WAT . D 4 HOH A 26 725 725 HOH WAT . D 4 HOH A 27 726 726 HOH WAT . D 4 HOH A 28 727 727 HOH WAT . D 4 HOH A 29 728 728 HOH WAT . D 4 HOH A 30 729 729 HOH WAT . D 4 HOH A 31 730 730 HOH WAT . D 4 HOH A 32 731 731 HOH WAT . D 4 HOH A 33 732 732 HOH WAT . D 4 HOH A 34 733 733 HOH WAT . D 4 HOH A 35 734 734 HOH WAT . D 4 HOH A 36 735 735 HOH WAT . D 4 HOH A 37 736 736 HOH WAT . D 4 HOH A 38 737 737 HOH WAT . D 4 HOH A 39 738 738 HOH WAT . D 4 HOH A 40 739 739 HOH WAT . D 4 HOH A 41 740 740 HOH WAT . D 4 HOH A 42 741 741 HOH WAT . D 4 HOH A 43 742 742 HOH WAT . D 4 HOH A 44 743 743 HOH WAT . D 4 HOH A 45 744 744 HOH WAT . D 4 HOH A 46 745 745 HOH WAT . D 4 HOH A 47 746 746 HOH WAT . D 4 HOH A 48 747 747 HOH WAT . D 4 HOH A 49 748 748 HOH WAT . D 4 HOH A 50 749 749 HOH WAT . D 4 HOH A 51 750 750 HOH WAT . D 4 HOH A 52 751 751 HOH WAT . D 4 HOH A 53 752 752 HOH WAT . D 4 HOH A 54 753 753 HOH WAT . D 4 HOH A 55 754 754 HOH WAT . D 4 HOH A 56 755 755 HOH WAT . D 4 HOH A 57 756 756 HOH WAT . D 4 HOH A 58 757 757 HOH WAT . D 4 HOH A 59 758 758 HOH WAT . D 4 HOH A 60 759 759 HOH WAT . D 4 HOH A 61 760 760 HOH WAT . D 4 HOH A 62 761 761 HOH WAT . D 4 HOH A 63 762 762 HOH WAT . D 4 HOH A 64 763 763 HOH WAT . D 4 HOH A 65 764 764 HOH WAT . D 4 HOH A 66 765 765 HOH WAT . D 4 HOH A 67 766 766 HOH WAT . D 4 HOH A 68 767 767 HOH WAT . D 4 HOH A 69 768 768 HOH WAT . D 4 HOH A 70 769 769 HOH WAT . D 4 HOH A 71 770 770 HOH WAT . D 4 HOH A 72 771 771 HOH WAT . D 4 HOH A 73 772 772 HOH WAT . D 4 HOH A 74 773 773 HOH WAT . D 4 HOH A 75 774 774 HOH WAT . D 4 HOH A 76 775 775 HOH WAT . D 4 HOH A 77 776 776 HOH WAT . D 4 HOH A 78 777 777 HOH WAT . D 4 HOH A 79 778 778 HOH WAT . D 4 HOH A 80 779 779 HOH WAT . D 4 HOH A 81 780 780 HOH WAT . D 4 HOH A 82 781 781 HOH WAT . D 4 HOH A 83 782 782 HOH WAT . D 4 HOH A 84 783 783 HOH WAT . D 4 HOH A 85 784 784 HOH WAT . D 4 HOH A 86 785 785 HOH WAT . D 4 HOH A 87 786 786 HOH WAT . D 4 HOH A 88 787 787 HOH WAT . D 4 HOH A 89 788 788 HOH WAT . D 4 HOH A 90 789 789 HOH WAT . D 4 HOH A 91 790 790 HOH WAT . D 4 HOH A 92 791 791 HOH WAT . D 4 HOH A 93 792 792 HOH WAT . D 4 HOH A 94 793 793 HOH WAT . D 4 HOH A 95 794 794 HOH WAT . D 4 HOH A 96 795 795 HOH WAT . D 4 HOH A 97 796 796 HOH WAT . D 4 HOH A 98 797 797 HOH WAT . D 4 HOH A 99 798 798 HOH WAT . D 4 HOH A 100 799 799 HOH WAT . D 4 HOH A 101 800 800 HOH WAT . D 4 HOH A 102 801 801 HOH WAT . D 4 HOH A 103 802 802 HOH WAT . D 4 HOH A 104 803 803 HOH WAT . D 4 HOH A 105 805 805 HOH WAT . D 4 HOH A 106 806 806 HOH WAT . D 4 HOH A 107 807 807 HOH WAT . D 4 HOH A 108 810 810 HOH WAT . D 4 HOH A 109 811 811 HOH WAT . D 4 HOH A 110 812 812 HOH WAT . D 4 HOH A 111 813 813 HOH WAT . D 4 HOH A 112 814 814 HOH WAT . D 4 HOH A 113 815 815 HOH WAT . D 4 HOH A 114 816 816 HOH WAT . D 4 HOH A 115 818 818 HOH WAT . D 4 HOH A 116 819 819 HOH WAT . D 4 HOH A 117 821 821 HOH WAT . D 4 HOH A 118 822 822 HOH WAT . D 4 HOH A 119 823 823 HOH WAT . D 4 HOH A 120 824 824 HOH WAT . D 4 HOH A 121 825 825 HOH WAT . D 4 HOH A 122 826 826 HOH WAT . D 4 HOH A 123 827 827 HOH WAT . D 4 HOH A 124 828 828 HOH WAT . D 4 HOH A 125 829 829 HOH WAT . D 4 HOH A 126 830 830 HOH WAT . D 4 HOH A 127 831 831 HOH WAT . D 4 HOH A 128 832 832 HOH WAT . D 4 HOH A 129 835 835 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N GLY . . . B 2 28.454 -8.49 79.631 1 105.94 ? N GLY 1300 A 1 HETATM 2 C CA GLY . . . B 2 28.759 -9.907 79.964 1 107.33 ? CA GLY 1300 A 1 HETATM 3 C C GLY . . . B 2 28.712 -10.811 78.749 1 108.1 ? C GLY 1300 A 1 HETATM 4 O O GLY . . . B 2 27.638 -11.387 78.481 1 108.67 ? O GLY 1300 A 1 HETATM 5 O OXT GLY . . . B 2 29.748 -10.946 78.063 1 109.1 ? OXT GLY 1300 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 259 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #