data_2ZTC # _model_server_result.job_id yB0e-ElUfghsSXirrQcW1w _model_server_result.datetime_utc '2025-03-04 03:57:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ztc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":502}' # _entry.id 2ZTC # _exptl.entry_id 2ZTC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 121.8 _cell.angle_gamma 90 _cell.entry_id 2ZTC _cell.length_a 131.2 _cell.length_b 95.669 _cell.length_c 77.209 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ZTC _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_554 -x,y,-z-1 -1 0 0 0 1 0 0 0 -1 40.68573 0 -65.619365 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 116 n n C1 C2 GOL sing 117 n n C1 H11 GOL sing 118 n n C1 H12 GOL sing 119 n n O1 HO1 GOL sing 120 n n C2 O2 GOL sing 121 n n C2 C3 GOL sing 122 n n C2 H2 GOL sing 123 n n O2 HO2 GOL sing 124 n n C3 O3 GOL sing 125 n n C3 H31 GOL sing 126 n n C3 H32 GOL sing 127 n n O3 HO3 GOL sing 128 n n # _atom_sites.entry_id 2ZTC _atom_sites.fract_transf_matrix[1][1] 0.007622 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004725 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010453 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015239 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 GOL A 1 502 502 GOL GOL . F 2 GOL B 1 500 500 GOL GOL . G 2 GOL C 1 503 503 GOL GOL . H 2 GOL D 1 501 501 GOL GOL . I 3 HOH A 1 503 4 HOH HOH . I 3 HOH A 2 504 7 HOH HOH . I 3 HOH A 3 505 17 HOH HOH . I 3 HOH A 4 506 19 HOH HOH . I 3 HOH A 5 507 23 HOH HOH . I 3 HOH A 6 508 25 HOH HOH . I 3 HOH A 7 509 27 HOH HOH . I 3 HOH A 8 510 30 HOH HOH . I 3 HOH A 9 511 37 HOH HOH . I 3 HOH A 10 512 39 HOH HOH . I 3 HOH A 11 513 46 HOH HOH . I 3 HOH A 12 514 51 HOH HOH . I 3 HOH A 13 515 54 HOH HOH . I 3 HOH A 14 516 68 HOH HOH . I 3 HOH A 15 517 72 HOH HOH . I 3 HOH A 16 518 76 HOH HOH . I 3 HOH A 17 519 78 HOH HOH . I 3 HOH A 18 520 87 HOH HOH . J 3 HOH B 1 501 1 HOH HOH . J 3 HOH B 2 502 24 HOH HOH . J 3 HOH B 3 503 32 HOH HOH . J 3 HOH B 4 504 45 HOH HOH . J 3 HOH B 5 505 63 HOH HOH . K 3 HOH C 1 504 8 HOH HOH . K 3 HOH C 2 505 11 HOH HOH . K 3 HOH C 3 506 12 HOH HOH . K 3 HOH C 4 507 15 HOH HOH . K 3 HOH C 5 508 18 HOH HOH . K 3 HOH C 6 509 20 HOH HOH . K 3 HOH C 7 510 21 HOH HOH . K 3 HOH C 8 511 31 HOH HOH . K 3 HOH C 9 512 47 HOH HOH . K 3 HOH C 10 513 55 HOH HOH . K 3 HOH C 11 514 59 HOH HOH . K 3 HOH C 12 515 62 HOH HOH . K 3 HOH C 13 516 66 HOH HOH . K 3 HOH C 14 517 83 HOH HOH . L 3 HOH D 1 502 5 HOH HOH . L 3 HOH D 2 503 22 HOH HOH . L 3 HOH D 3 504 40 HOH HOH . L 3 HOH D 4 505 43 HOH HOH . L 3 HOH D 5 506 49 HOH HOH . L 3 HOH D 6 507 56 HOH HOH . L 3 HOH D 7 508 58 HOH HOH . L 3 HOH D 8 509 61 HOH HOH . L 3 HOH D 9 510 65 HOH HOH . L 3 HOH D 10 511 82 HOH HOH . L 3 HOH D 11 512 85 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 2 2.19 41.984 -38.111 1 73.5 ? C1 GOL 502 A 1 HETATM 2 O O1 GOL . . . E 2 3.541 42.39 -38.07 1 86.99 ? O1 GOL 502 A 1 HETATM 3 C C2 GOL . . . E 2 1.775 41.905 -39.571 1 63.05 ? C2 GOL 502 A 1 HETATM 4 O O2 GOL . . . E 2 1.091 40.698 -39.858 1 55.05 ? O2 GOL 502 A 1 HETATM 5 C C3 GOL . . . E 2 3.026 41.982 -40.427 1 46.01 ? C3 GOL 502 A 1 HETATM 6 O O3 GOL . . . E 2 2.792 41.126 -41.518 1 89.44 ? O3 GOL 502 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #