data_2ZUR # _model_server_result.job_id ML8PvZER4_KQCWuCwR1baA _model_server_result.datetime_utc '2024-11-09 02:10:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2zur # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":176}' # _entry.id 2ZUR # _exptl.entry_id 2ZUR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 112.411 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CADMIUM ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2ZUR _cell.length_a 181.276 _cell.length_b 181.276 _cell.length_c 181.276 _cell.Z_PDB 96 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ZUR _symmetry.cell_setting ? _symmetry.Int_Tables_number 209 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'F 4 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details 24-meric _pdbx_struct_assembly.oligomeric_count 24 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 4 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 5 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 6 'crystal symmetry operation' 6_555 z,-x,-y 0 0 1 -1 0 0 0 -1 0 0 0 0 7 'crystal symmetry operation' 7_555 -z,-x,y 0 0 -1 -1 0 0 0 1 0 0 0 0 8 'crystal symmetry operation' 8_555 -z,x,-y 0 0 -1 1 0 0 0 -1 0 0 0 0 9 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 10 'crystal symmetry operation' 10_555 -y,z,-x 0 -1 0 0 0 1 -1 0 0 0 0 0 11 'crystal symmetry operation' 11_555 y,-z,-x 0 1 0 0 0 -1 -1 0 0 0 0 0 12 'crystal symmetry operation' 12_555 -y,-z,x 0 -1 0 0 0 -1 1 0 0 0 0 0 13 'crystal symmetry operation' 13_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 14 'crystal symmetry operation' 14_555 -y,-x,-z 0 -1 0 -1 0 0 0 0 -1 0 0 0 15 'crystal symmetry operation' 15_555 y,-x,z 0 1 0 -1 0 0 0 0 1 0 0 0 16 'crystal symmetry operation' 16_555 -y,x,z 0 -1 0 1 0 0 0 0 1 0 0 0 17 'crystal symmetry operation' 17_555 x,z,-y 1 0 0 0 0 1 0 -1 0 0 0 0 18 'crystal symmetry operation' 18_555 -x,z,y -1 0 0 0 0 1 0 1 0 0 0 0 19 'crystal symmetry operation' 19_555 -x,-z,-y -1 0 0 0 0 -1 0 -1 0 0 0 0 20 'crystal symmetry operation' 20_555 x,-z,y 1 0 0 0 0 -1 0 1 0 0 0 0 21 'crystal symmetry operation' 21_555 z,y,-x 0 0 1 0 1 0 -1 0 0 0 0 0 22 'crystal symmetry operation' 22_555 z,-y,x 0 0 1 0 -1 0 1 0 0 0 0 0 23 'crystal symmetry operation' 23_555 -z,y,x 0 0 -1 0 1 0 1 0 0 0 0 0 24 'crystal symmetry operation' 24_555 -z,-y,-x 0 0 -1 0 -1 0 -1 0 0 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C VAL 47 X VAL 47 1_555 A N C4R 48 X C4R 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.597 ? covale ? covale2 A C C4R 48 X C4R 48 1_555 A N HIS 49 X HIS 49 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.58 ? metalc ? metalc1 A OE2 GLU 11 X GLU 11 1_555 D CD CD . X CD 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.488 ? metalc ? metalc2 A OE2 GLU 45 X GLU 45 1_555 A RH C4R 48 X C4R 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? metalc ? metalc3 A RH C4R 48 X C4R 48 1_555 S O HOH . X HOH 356 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? metalc ? metalc4 A RH C4R 48 X C4R 48 1_555 S O HOH . X HOH 357 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc5 A RH C4R 48 X C4R 48 1_555 S O HOH . X HOH 358 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? metalc ? metalc6 A NE2 HIS 49 X HIS 49 1_555 I RH1 RH . X RH 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.924 ? metalc ? metalc7 A OE1 GLU 60 X GLU 60 1_555 C CD CD . X CD 176 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc8 A OD1 ASP 80 X ASP 80 1_555 B CD CD . X CD 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc9 A OD2 ASP 80 X ASP 80 1_555 B CD CD . X CD 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.411 ? metalc ? metalc10 A NE2 HIS 114 X HIS 114 1_555 J RH1 RH . X RH 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? metalc ? metalc11 C CD CD . X CD 176 1_555 S O HOH . X HOH 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.966 ? # _chem_comp.formula 'Cd 2' _chem_comp.formula_weight 112.411 _chem_comp.id CD _chem_comp.mon_nstd_flag . _chem_comp.name 'CADMIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2ZUR _atom_sites.fract_transf_matrix[1][1] 0.005516 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005516 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005516 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CD X 1 175 1 CD CD2 . C 2 CD X 1 176 2 CD CD2 . D 2 CD X 1 177 3 CD CD2 . E 2 CD X 1 178 4 CD CD2 . F 2 CD X 1 179 5 CD CD2 . G 3 SO4 X 1 180 1 SO4 SO4 . H 3 SO4 X 1 181 2 SO4 SO4 . I 4 RH X 1 182 2 RH RH . J 4 RH X 1 183 3 RH RH . K 5 EDO X 1 184 1 EDO EDO . L 5 EDO X 1 185 2 EDO EDO . M 5 EDO X 1 186 3 EDO EDO . N 5 EDO X 1 187 4 EDO EDO . O 5 EDO X 1 188 5 EDO EDO . P 5 EDO X 1 189 6 EDO EDO . Q 5 EDO X 1 190 7 EDO EDO . R 5 EDO X 1 191 8 EDO EDO . S 6 HOH X 1 192 192 HOH HOH . S 6 HOH X 2 193 1 HOH HOH . S 6 HOH X 3 194 2 HOH HOH . S 6 HOH X 4 195 3 HOH HOH . S 6 HOH X 5 196 4 HOH HOH . S 6 HOH X 6 197 5 HOH HOH . S 6 HOH X 7 198 6 HOH HOH . S 6 HOH X 8 199 7 HOH HOH . S 6 HOH X 9 200 8 HOH HOH . S 6 HOH X 10 201 9 HOH HOH . S 6 HOH X 11 202 10 HOH HOH . S 6 HOH X 12 203 11 HOH HOH . S 6 HOH X 13 204 12 HOH HOH . S 6 HOH X 14 205 13 HOH HOH . S 6 HOH X 15 206 14 HOH HOH . S 6 HOH X 16 207 15 HOH HOH . S 6 HOH X 17 208 16 HOH HOH . S 6 HOH X 18 209 17 HOH HOH . S 6 HOH X 19 210 18 HOH HOH . S 6 HOH X 20 211 19 HOH HOH . S 6 HOH X 21 212 20 HOH HOH . S 6 HOH X 22 213 21 HOH HOH . S 6 HOH X 23 214 22 HOH HOH . S 6 HOH X 24 215 23 HOH HOH . S 6 HOH X 25 216 24 HOH HOH . S 6 HOH X 26 217 25 HOH HOH . S 6 HOH X 27 218 26 HOH HOH . S 6 HOH X 28 219 27 HOH HOH . S 6 HOH X 29 220 28 HOH HOH . S 6 HOH X 30 221 29 HOH HOH . S 6 HOH X 31 222 30 HOH HOH . S 6 HOH X 32 223 31 HOH HOH . S 6 HOH X 33 224 32 HOH HOH . S 6 HOH X 34 225 33 HOH HOH . S 6 HOH X 35 226 34 HOH HOH . S 6 HOH X 36 227 35 HOH HOH . S 6 HOH X 37 228 36 HOH HOH . S 6 HOH X 38 229 37 HOH HOH . S 6 HOH X 39 230 38 HOH HOH . S 6 HOH X 40 231 39 HOH HOH . S 6 HOH X 41 232 40 HOH HOH . S 6 HOH X 42 233 41 HOH HOH . S 6 HOH X 43 234 42 HOH HOH . S 6 HOH X 44 235 43 HOH HOH . S 6 HOH X 45 236 44 HOH HOH . S 6 HOH X 46 237 45 HOH HOH . S 6 HOH X 47 238 46 HOH HOH . S 6 HOH X 48 239 47 HOH HOH . S 6 HOH X 49 240 48 HOH HOH . S 6 HOH X 50 241 49 HOH HOH . S 6 HOH X 51 242 50 HOH HOH . S 6 HOH X 52 243 51 HOH HOH . S 6 HOH X 53 244 52 HOH HOH . S 6 HOH X 54 245 53 HOH HOH . S 6 HOH X 55 246 54 HOH HOH . S 6 HOH X 56 247 55 HOH HOH . S 6 HOH X 57 248 56 HOH HOH . S 6 HOH X 58 249 57 HOH HOH . S 6 HOH X 59 250 58 HOH HOH . S 6 HOH X 60 251 59 HOH HOH . S 6 HOH X 61 252 60 HOH HOH . S 6 HOH X 62 253 61 HOH HOH . S 6 HOH X 63 254 62 HOH HOH . S 6 HOH X 64 255 63 HOH HOH . S 6 HOH X 65 256 64 HOH HOH . S 6 HOH X 66 257 65 HOH HOH . S 6 HOH X 67 258 66 HOH HOH . S 6 HOH X 68 259 67 HOH HOH . S 6 HOH X 69 260 68 HOH HOH . S 6 HOH X 70 261 69 HOH HOH . S 6 HOH X 71 262 70 HOH HOH . S 6 HOH X 72 263 71 HOH HOH . S 6 HOH X 73 264 72 HOH HOH . S 6 HOH X 74 265 73 HOH HOH . S 6 HOH X 75 266 74 HOH HOH . S 6 HOH X 76 267 75 HOH HOH . S 6 HOH X 77 268 76 HOH HOH . S 6 HOH X 78 269 77 HOH HOH . S 6 HOH X 79 270 78 HOH HOH . S 6 HOH X 80 271 79 HOH HOH . S 6 HOH X 81 272 80 HOH HOH . S 6 HOH X 82 273 81 HOH HOH . S 6 HOH X 83 274 82 HOH HOH . S 6 HOH X 84 275 83 HOH HOH . S 6 HOH X 85 276 84 HOH HOH . S 6 HOH X 86 277 85 HOH HOH . S 6 HOH X 87 278 86 HOH HOH . S 6 HOH X 88 279 87 HOH HOH . S 6 HOH X 89 280 88 HOH HOH . S 6 HOH X 90 281 89 HOH HOH . S 6 HOH X 91 282 90 HOH HOH . S 6 HOH X 92 283 91 HOH HOH . S 6 HOH X 93 284 92 HOH HOH . S 6 HOH X 94 285 93 HOH HOH . S 6 HOH X 95 286 94 HOH HOH . S 6 HOH X 96 287 95 HOH HOH . S 6 HOH X 97 288 96 HOH HOH . S 6 HOH X 98 289 97 HOH HOH . S 6 HOH X 99 290 98 HOH HOH . S 6 HOH X 100 291 99 HOH HOH . S 6 HOH X 101 292 100 HOH HOH . S 6 HOH X 102 293 101 HOH HOH . S 6 HOH X 103 294 102 HOH HOH . S 6 HOH X 104 295 103 HOH HOH . S 6 HOH X 105 296 104 HOH HOH . S 6 HOH X 106 297 105 HOH HOH . S 6 HOH X 107 298 106 HOH HOH . S 6 HOH X 108 299 107 HOH HOH . S 6 HOH X 109 300 108 HOH HOH . S 6 HOH X 110 301 109 HOH HOH . S 6 HOH X 111 302 110 HOH HOH . S 6 HOH X 112 303 111 HOH HOH . S 6 HOH X 113 304 112 HOH HOH . S 6 HOH X 114 305 113 HOH HOH . S 6 HOH X 115 306 114 HOH HOH . S 6 HOH X 116 307 115 HOH HOH . S 6 HOH X 117 308 116 HOH HOH . S 6 HOH X 118 309 117 HOH HOH . S 6 HOH X 119 310 118 HOH HOH . S 6 HOH X 120 311 119 HOH HOH . S 6 HOH X 121 312 120 HOH HOH . S 6 HOH X 122 313 121 HOH HOH . S 6 HOH X 123 314 122 HOH HOH . S 6 HOH X 124 315 123 HOH HOH . S 6 HOH X 125 316 124 HOH HOH . S 6 HOH X 126 317 125 HOH HOH . S 6 HOH X 127 318 126 HOH HOH . S 6 HOH X 128 319 127 HOH HOH . S 6 HOH X 129 320 128 HOH HOH . S 6 HOH X 130 321 129 HOH HOH . S 6 HOH X 131 322 130 HOH HOH . S 6 HOH X 132 323 131 HOH HOH . S 6 HOH X 133 324 132 HOH HOH . S 6 HOH X 134 325 133 HOH HOH . S 6 HOH X 135 326 134 HOH HOH . S 6 HOH X 136 327 135 HOH HOH . S 6 HOH X 137 328 136 HOH HOH . S 6 HOH X 138 329 137 HOH HOH . S 6 HOH X 139 330 138 HOH HOH . S 6 HOH X 140 331 139 HOH HOH . S 6 HOH X 141 332 140 HOH HOH . S 6 HOH X 142 333 141 HOH HOH . S 6 HOH X 143 334 142 HOH HOH . S 6 HOH X 144 335 143 HOH HOH . S 6 HOH X 145 336 144 HOH HOH . S 6 HOH X 146 337 145 HOH HOH . S 6 HOH X 147 338 146 HOH HOH . S 6 HOH X 148 339 147 HOH HOH . S 6 HOH X 149 340 148 HOH HOH . S 6 HOH X 150 341 149 HOH HOH . S 6 HOH X 151 342 150 HOH HOH . S 6 HOH X 152 343 151 HOH HOH . S 6 HOH X 153 344 152 HOH HOH . S 6 HOH X 154 345 153 HOH HOH . S 6 HOH X 155 346 154 HOH HOH . S 6 HOH X 156 347 155 HOH HOH . S 6 HOH X 157 348 156 HOH HOH . S 6 HOH X 158 349 157 HOH HOH . S 6 HOH X 159 350 158 HOH HOH . S 6 HOH X 160 351 159 HOH HOH . S 6 HOH X 161 352 160 HOH HOH . S 6 HOH X 162 353 161 HOH HOH . S 6 HOH X 163 354 162 HOH HOH . S 6 HOH X 164 355 163 HOH HOH . S 6 HOH X 165 356 164 HOH HOH . S 6 HOH X 166 357 165 HOH HOH . S 6 HOH X 167 358 166 HOH HOH . S 6 HOH X 168 359 167 HOH HOH . S 6 HOH X 169 360 168 HOH HOH . S 6 HOH X 170 361 169 HOH HOH . S 6 HOH X 171 362 170 HOH HOH . S 6 HOH X 172 363 171 HOH HOH . S 6 HOH X 173 364 172 HOH HOH . S 6 HOH X 174 365 173 HOH HOH . S 6 HOH X 175 366 174 HOH HOH . S 6 HOH X 176 367 175 HOH HOH . S 6 HOH X 177 368 176 HOH HOH . S 6 HOH X 178 369 177 HOH HOH . S 6 HOH X 179 370 178 HOH HOH . S 6 HOH X 180 371 179 HOH HOH . S 6 HOH X 181 372 180 HOH HOH . S 6 HOH X 182 373 181 HOH HOH . S 6 HOH X 183 374 182 HOH HOH . S 6 HOH X 184 375 183 HOH HOH . S 6 HOH X 185 376 184 HOH HOH . S 6 HOH X 186 377 185 HOH HOH . S 6 HOH X 187 378 186 HOH HOH . S 6 HOH X 188 379 187 HOH HOH . S 6 HOH X 189 380 188 HOH HOH . S 6 HOH X 190 381 189 HOH HOH . S 6 HOH X 191 382 190 HOH HOH . S 6 HOH X 192 383 191 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CD _atom_site.label_atom_id CD _atom_site.label_comp_id CD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x -23.766 _atom_site.Cartn_y -28.985 _atom_site.Cartn_z -7.432 _atom_site.occupancy 0.1 _atom_site.B_iso_or_equiv 23.49 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CD _atom_site.auth_comp_id CD _atom_site.auth_seq_id 176 _atom_site.auth_asym_id X _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #