data_2ZV2 # _model_server_result.job_id TQ0Ay9uA7qk9Dy7a12j9oA _model_server_result.datetime_utc '2024-10-15 10:24:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2zv2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 2ZV2 # _exptl.entry_id 2ZV2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 314.294 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '7-oxo-7H-benzimidazo[2,1-a]benz[de]isoquinoline-3-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2ZV2 _cell.length_a 67.368 _cell.length_b 77.153 _cell.length_c 84.332 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ZV2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H10 N2 O3' _chem_comp.formula_weight 314.294 _chem_comp.id 609 _chem_comp.mon_nstd_flag . _chem_comp.name '7-oxo-7H-benzimidazo[2,1-a]benz[de]isoquinoline-3-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAS CAW 609 doub 1 n y CAR CAW 609 sing 2 n y CAW CAT 609 sing 3 n y CAI CAR 609 doub 4 n y CAR CAO 609 sing 5 n y CAF CAI 609 sing 6 n y CAI HAI 609 sing 7 n n CAF CAJ 609 doub 8 n y CAF HAF 609 sing 9 n n CAJ CAS 609 sing 10 n y CAJ HAJ 609 sing 11 n n CAS CAP 609 sing 12 n n OAB CAP 609 doub 13 n n CAP NAX 609 sing 14 n n NAX CAV 609 sing 15 n y NAX CAU 609 sing 16 n y CAK CAU 609 sing 17 n y CAU CAQ 609 doub 18 n y CAK CAE 609 doub 19 n y CAK HAK 609 sing 20 n n CAE CAD 609 sing 21 n y CAE HAE 609 sing 22 n n CAD CAH 609 doub 23 n y CAD HAD 609 sing 24 n n CAQ CAH 609 sing 25 n y CAH HAH 609 sing 26 n n NAM CAQ 609 sing 27 n y CAV NAM 609 doub 28 n y CAT CAV 609 sing 29 n y CAT CAL 609 doub 30 n y CAG CAL 609 sing 31 n y CAL HAL 609 sing 32 n n CAO CAG 609 doub 33 n y CAG HAG 609 sing 34 n n CAN CAO 609 sing 35 n n OAA CAN 609 doub 36 n n CAN OAC 609 sing 37 n n OAC HOAC 609 sing 38 n n # _atom_sites.entry_id 2ZV2 _atom_sites.fract_transf_matrix[1][1] 0.014844 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012961 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011858 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 609 A 1 501 501 609 609 . C 3 HOH A 1 1 1 HOH HOH . C 3 HOH A 2 2 2 HOH HOH . C 3 HOH A 3 3 3 HOH HOH . C 3 HOH A 4 4 4 HOH HOH . C 3 HOH A 5 5 5 HOH HOH . C 3 HOH A 6 6 6 HOH HOH . C 3 HOH A 7 7 7 HOH HOH . C 3 HOH A 8 8 8 HOH HOH . C 3 HOH A 9 9 9 HOH HOH . C 3 HOH A 10 10 10 HOH HOH . C 3 HOH A 11 11 11 HOH HOH . C 3 HOH A 12 12 12 HOH HOH . C 3 HOH A 13 13 13 HOH HOH . C 3 HOH A 14 14 14 HOH HOH . C 3 HOH A 15 15 15 HOH HOH . C 3 HOH A 16 16 16 HOH HOH . C 3 HOH A 17 17 17 HOH HOH . C 3 HOH A 18 18 18 HOH HOH . C 3 HOH A 19 19 19 HOH HOH . C 3 HOH A 20 20 20 HOH HOH . C 3 HOH A 21 21 21 HOH HOH . C 3 HOH A 22 22 22 HOH HOH . C 3 HOH A 23 23 23 HOH HOH . C 3 HOH A 24 24 24 HOH HOH . C 3 HOH A 25 25 25 HOH HOH . C 3 HOH A 26 26 26 HOH HOH . C 3 HOH A 27 27 27 HOH HOH . C 3 HOH A 28 28 28 HOH HOH . C 3 HOH A 29 29 29 HOH HOH . C 3 HOH A 30 30 30 HOH HOH . C 3 HOH A 31 31 31 HOH HOH . C 3 HOH A 32 32 32 HOH HOH . C 3 HOH A 33 33 33 HOH HOH . C 3 HOH A 34 34 34 HOH HOH . C 3 HOH A 35 35 35 HOH HOH . C 3 HOH A 36 36 36 HOH HOH . C 3 HOH A 37 37 37 HOH HOH . C 3 HOH A 38 38 38 HOH HOH . C 3 HOH A 39 39 39 HOH HOH . C 3 HOH A 40 40 40 HOH HOH . C 3 HOH A 41 41 41 HOH HOH . C 3 HOH A 42 42 42 HOH HOH . C 3 HOH A 43 43 43 HOH HOH . C 3 HOH A 44 44 44 HOH HOH . C 3 HOH A 45 45 45 HOH HOH . C 3 HOH A 46 46 46 HOH HOH . C 3 HOH A 47 47 47 HOH HOH . C 3 HOH A 48 48 48 HOH HOH . C 3 HOH A 49 49 49 HOH HOH . C 3 HOH A 50 50 50 HOH HOH . C 3 HOH A 51 51 51 HOH HOH . C 3 HOH A 52 52 52 HOH HOH . C 3 HOH A 53 53 53 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAW 609 . . . B 2 1.1 -8.261 -26.327 1 36.5 ? CAW 609 501 A 1 HETATM 2 C CAR 609 . . . B 2 1.063 -9.644 -26.479 1 30.03 ? CAR 609 501 A 1 HETATM 3 C CAI 609 . . . B 2 -0.081 -10.248 -26.99 1 30.72 ? CAI 609 501 A 1 HETATM 4 C CAF 609 . . . B 2 -1.183 -9.478 -27.343 1 38.05 ? CAF 609 501 A 1 HETATM 5 C CAJ 609 . . . B 2 -1.147 -8.097 -27.191 1 29.83 ? CAJ 609 501 A 1 HETATM 6 C CAS 609 . . . B 2 -0.003 -7.49 -26.683 1 40.1 ? CAS 609 501 A 1 HETATM 7 C CAP 609 . . . B 2 0.024 -6.109 -26.518 1 30.41 ? CAP 609 501 A 1 HETATM 8 O OAB 609 . . . B 2 -0.938 -5.421 -26.856 1 42.28 ? OAB 609 501 A 1 HETATM 9 N NAX 609 . . . B 2 1.165 -5.503 -25.981 1 31.45 ? NAX 609 501 A 1 HETATM 10 C CAU 609 . . . B 2 1.463 -4.189 -25.609 1 33.54 ? CAU 609 501 A 1 HETATM 11 C CAK 609 . . . B 2 0.739 -3.004 -25.664 1 31.82 ? CAK 609 501 A 1 HETATM 12 C CAE 609 . . . B 2 1.293 -1.836 -25.153 1 38.09 ? CAE 609 501 A 1 HETATM 13 C CAD 609 . . . B 2 2.566 -1.86 -24.593 1 30.36 ? CAD 609 501 A 1 HETATM 14 C CAH 609 . . . B 2 3.288 -3.047 -24.543 1 31.76 ? CAH 609 501 A 1 HETATM 15 C CAQ 609 . . . B 2 2.736 -4.218 -25.051 1 35.96 ? CAQ 609 501 A 1 HETATM 16 N NAM 609 . . . B 2 3.189 -5.47 -25.084 1 38.57 ? NAM 609 501 A 1 HETATM 17 C CAV 609 . . . B 2 2.276 -6.275 -25.625 1 42.13 ? CAV 609 501 A 1 HETATM 18 C CAT 609 . . . B 2 2.237 -7.653 -25.803 1 38.17 ? CAT 609 501 A 1 HETATM 19 C CAL 609 . . . B 2 3.334 -8.425 -25.437 1 38.26 ? CAL 609 501 A 1 HETATM 20 C CAG 609 . . . B 2 3.294 -9.806 -25.594 1 34.98 ? CAG 609 501 A 1 HETATM 21 C CAO 609 . . . B 2 2.159 -10.419 -26.113 1 35.58 ? CAO 609 501 A 1 HETATM 22 C CAN 609 . . . B 2 2.134 -11.946 -26.239 1 38.48 ? CAN 609 501 A 1 HETATM 23 O OAC 609 . . . B 2 1.046 -12.544 -26.099 1 35.68 ? OAC 609 501 A 1 HETATM 24 O OAA 609 . . . B 2 3.222 -12.528 -26.437 1 44.9 ? OAA 609 501 A 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 24 #