data_2ZXN
#
_model_server_result.job_id            H5A1zQzVdrxI167SFfXfPA 
_model_server_result.datetime_utc      '2025-02-27 01:50:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2zxn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1}' 
#
_entry.id    2ZXN 
#
_exptl.entry_id    2ZXN 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              430.663 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (1R,3S,5Z)-5-[(2E)-2-[(1R,3aS,7aR)-1-[(2S,3S)-3-(2-hydroxyethyl)heptan-2-yl]-7a-methyl-2,3,3a,5,6,7-hexahydro-1H-inden-4-ylidene]ethylidene]-4-methylidene-cyclohexane-1,3-diol 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          95.89 
_cell.angle_gamma         90 
_cell.entry_id            2ZXN 
_cell.length_a            153.158 
_cell.length_b            43.879 
_cell.length_c            41.886 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2ZXN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
PISA dimeric 2 software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D 1 1 
B,E 2 1 
A,B,C,D,E 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C28 H46 O3' 
_chem_comp.formula_weight    430.663 
_chem_comp.id                JC1 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (1R,3S,5Z)-5-[(2E)-2-[(1R,3aS,7aR)-1-[(2S,3S)-3-(2-hydroxyethyl)heptan-2-yl]-7a-methyl-2,3,3a,5,6,7-hexahydro-1H-inden-4-ylidene]ethylidene]-4-methylidene-cyclohexane-1,3-diol 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C31 C30 JC1 sing 173 n n 
C30 C29 JC1 sing 174 n n 
C29 C28 JC1 sing 175 n n 
C28 C22 JC1 sing 176 n n 
C22 C23 JC1 sing 177 n n 
C22 C20 JC1 sing 178 n n 
C23 C24 JC1 sing 179 n n 
C24 O03 JC1 sing 180 n n 
C20 C21 JC1 sing 181 n n 
C20 C17 JC1 sing 182 n n 
C17 C16 JC1 sing 183 n n 
C17 C13 JC1 sing 184 n n 
C16 C15 JC1 sing 185 n n 
C15 C14 JC1 sing 186 n n 
C14 C13 JC1 sing 187 n n 
C14 C08 JC1 sing 188 n n 
C13 C18 JC1 sing 189 n n 
C13 C12 JC1 sing 190 n n 
C12 C11 JC1 sing 191 n n 
C11 C09 JC1 sing 192 n n 
C09 C08 JC1 sing 193 n n 
C08 C07 JC1 doub 194 n n 
C07 C06 JC1 sing 195 n n 
C06 C05 JC1 doub 196 n n 
C05 C04 JC1 sing 197 n n 
C05 C10 JC1 sing 198 n n 
C04 C03 JC1 sing 199 n n 
C03 O02 JC1 sing 200 n n 
C03 C02 JC1 sing 201 n n 
C02 C01 JC1 sing 202 n n 
C01 O01 JC1 sing 203 n n 
C01 C10 JC1 sing 204 n n 
C10 C19 JC1 doub 205 n n 
C31 H31 JC1 sing 206 n n 
C31 H31A JC1 sing 207 n n 
C31 H31B JC1 sing 208 n n 
C30 H30 JC1 sing 209 n n 
C30 H30A JC1 sing 210 n n 
C29 H29 JC1 sing 211 n n 
C29 H29A JC1 sing 212 n n 
C28 H28 JC1 sing 213 n n 
C28 H28A JC1 sing 214 n n 
C22 H22 JC1 sing 215 n n 
C23 H23 JC1 sing 216 n n 
C23 H23A JC1 sing 217 n n 
C24 H24 JC1 sing 218 n n 
C24 H24A JC1 sing 219 n n 
O03 HO03 JC1 sing 220 n n 
C20 H20 JC1 sing 221 n n 
C21 H21 JC1 sing 222 n n 
C21 H21A JC1 sing 223 n n 
C21 H21B JC1 sing 224 n n 
C17 H17 JC1 sing 225 n n 
C16 H16 JC1 sing 226 n n 
C16 H16A JC1 sing 227 n n 
C15 H15 JC1 sing 228 e n 
C15 H15A JC1 sing 229 n n 
C14 H14 JC1 sing 230 n n 
C18 H18 JC1 sing 231 z n 
C18 H18A JC1 sing 232 n n 
C18 H18B JC1 sing 233 n n 
C12 H12 JC1 sing 234 n n 
C12 H12A JC1 sing 235 n n 
C11 H11 JC1 sing 236 n n 
C11 H11A JC1 sing 237 n n 
C09 H09 JC1 sing 238 n n 
C09 H09A JC1 sing 239 n n 
C07 H07 JC1 sing 240 n n 
C06 H06 JC1 sing 241 n n 
C04 H04 JC1 sing 242 n n 
C04 H04A JC1 sing 243 n n 
C03 H03 JC1 sing 244 n n 
O02 HO02 JC1 sing 245 n n 
C02 H02 JC1 sing 246 n n 
C02 H02A JC1 sing 247 n n 
C01 H01 JC1 sing 248 n n 
O01 HO01 JC1 sing 249 n n 
C19 H19 JC1 sing 250 n n 
C19 H19A JC1 sing 251 n n 
#
_atom_sites.entry_id                     2ZXN 
_atom_sites.fract_transf_matrix[1][1]    0.006529 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000673 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.02279 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.024001 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 JC1 A 1 1 1 JC1 JC . 
D 4 HOH A 1 2 2 HOH HOH . 
D 4 HOH A 2 3 3 HOH HOH . 
D 4 HOH A 3 4 4 HOH HOH . 
D 4 HOH A 4 5 5 HOH HOH . 
D 4 HOH A 5 6 6 HOH HOH . 
D 4 HOH A 6 7 7 HOH HOH . 
D 4 HOH A 7 8 8 HOH HOH . 
D 4 HOH A 8 9 9 HOH HOH . 
D 4 HOH A 9 10 10 HOH HOH . 
D 4 HOH A 10 11 11 HOH HOH . 
D 4 HOH A 11 12 12 HOH HOH . 
D 4 HOH A 12 13 13 HOH HOH . 
D 4 HOH A 13 14 14 HOH HOH . 
D 4 HOH A 14 15 15 HOH HOH . 
D 4 HOH A 15 16 16 HOH HOH . 
D 4 HOH A 16 17 17 HOH HOH . 
D 4 HOH A 17 18 18 HOH HOH . 
D 4 HOH A 18 19 19 HOH HOH . 
D 4 HOH A 19 20 20 HOH HOH . 
D 4 HOH A 20 21 21 HOH HOH . 
D 4 HOH A 21 22 22 HOH HOH . 
D 4 HOH A 22 23 23 HOH HOH . 
D 4 HOH A 23 24 24 HOH HOH . 
D 4 HOH A 24 25 25 HOH HOH . 
D 4 HOH A 25 26 26 HOH HOH . 
D 4 HOH A 26 27 27 HOH HOH . 
D 4 HOH A 27 28 28 HOH HOH . 
D 4 HOH A 28 29 29 HOH HOH . 
D 4 HOH A 29 30 30 HOH HOH . 
D 4 HOH A 30 31 31 HOH HOH . 
D 4 HOH A 31 32 32 HOH HOH . 
D 4 HOH A 32 33 33 HOH HOH . 
D 4 HOH A 33 34 34 HOH HOH . 
D 4 HOH A 34 35 35 HOH HOH . 
D 4 HOH A 35 36 36 HOH HOH . 
D 4 HOH A 36 38 38 HOH HOH . 
D 4 HOH A 37 39 39 HOH HOH . 
D 4 HOH A 38 40 40 HOH HOH . 
D 4 HOH A 39 41 41 HOH HOH . 
D 4 HOH A 40 42 42 HOH HOH . 
D 4 HOH A 41 43 43 HOH HOH . 
D 4 HOH A 42 44 44 HOH HOH . 
D 4 HOH A 43 45 45 HOH HOH . 
D 4 HOH A 44 46 46 HOH HOH . 
D 4 HOH A 45 47 47 HOH HOH . 
D 4 HOH A 46 48 48 HOH HOH . 
D 4 HOH A 47 49 49 HOH HOH . 
D 4 HOH A 48 50 50 HOH HOH . 
D 4 HOH A 49 424 1 HOH HOH . 
E 4 HOH C 1 37 37 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C31 JC1 . . . C 3 7.561 -5.727 26.286 1 34.12 ? C31 JC1 1 A 1 
HETATM 2 C C30 JC1 . . . C 3 8.259 -5.374 27.586 1 38.38 ? C30 JC1 1 A 1 
HETATM 3 C C29 JC1 . . . C 3 9.504 -4.535 27.333 1 39.86 ? C29 JC1 1 A 1 
HETATM 4 C C28 JC1 . . . C 3 10.746 -5.22 27.918 1 42.04 ? C28 JC1 1 A 1 
HETATM 5 C C22 JC1 . . . C 3 12.014 -4.328 27.903 1 40.96 ? C22 JC1 1 A 1 
HETATM 6 C C23 JC1 . . . C 3 12.656 -4.332 29.325 1 41.55 ? C23 JC1 1 A 1 
HETATM 7 C C24 JC1 . . . C 3 11.808 -3.71 30.451 1 36.84 ? C24 JC1 1 A 1 
HETATM 8 O O03 JC1 . . . C 3 11.063 -2.566 30.03 1 45.27 ? O03 JC1 1 A 1 
HETATM 9 C C20 JC1 . . . C 3 13.109 -4.701 26.814 1 34.64 ? C20 JC1 1 A 1 
HETATM 10 C C21 JC1 . . . C 3 13.839 -6.017 27.152 1 35.55 ? C21 JC1 1 A 1 
HETATM 11 C C17 JC1 . . . C 3 14.127 -3.495 26.537 1 30.32 ? C17 JC1 1 A 1 
HETATM 12 C C16 JC1 . . . C 3 15.29 -3.822 25.534 1 26.1 ? C16 JC1 1 A 1 
HETATM 13 C C15 JC1 . . . C 3 15.719 -2.525 24.831 1 26.93 ? C15 JC1 1 A 1 
HETATM 14 C C14 JC1 . . . C 3 14.926 -1.478 25.624 1 29.51 ? C14 JC1 1 A 1 
HETATM 15 C C13 JC1 . . . C 3 13.55 -2.156 25.944 1 30.45 ? C13 JC1 1 A 1 
HETATM 16 C C18 JC1 . . . C 3 12.561 -2.421 24.728 1 27.11 ? C18 JC1 1 A 1 
HETATM 17 C C12 JC1 . . . C 3 12.842 -1.214 26.994 1 31.43 ? C12 JC1 1 A 1 
HETATM 18 C C11 JC1 . . . C 3 12.617 0.256 26.503 1 29.65 ? C11 JC1 1 A 1 
HETATM 19 C C09 JC1 . . . C 3 13.876 0.884 25.86 1 29.72 ? C09 JC1 1 A 1 
HETATM 20 C C08 JC1 . . . C 3 14.594 -0.114 24.908 1 26.63 ? C08 JC1 1 A 1 
HETATM 21 C C07 JC1 . . . C 3 14.883 0.124 23.553 1 27.55 ? C07 JC1 1 A 1 
HETATM 22 C C06 JC1 . . . C 3 14.677 1.187 22.652 1 27.66 ? C06 JC1 1 A 1 
HETATM 23 C C05 JC1 . . . C 3 14.301 1.171 21.287 1 27.88 ? C05 JC1 1 A 1 
HETATM 24 C C04 JC1 . . . C 3 14.176 2.585 20.66 1 29.02 ? C04 JC1 1 A 1 
HETATM 25 C C03 JC1 . . . C 3 14.903 2.659 19.293 1 27.16 ? C03 JC1 1 A 1 
HETATM 26 O O02 JC1 . . . C 3 16.315 2.544 19.513 1 25.79 ? O02 JC1 1 A 1 
HETATM 27 C C02 JC1 . . . C 3 14.443 1.511 18.346 1 25.13 ? C02 JC1 1 A 1 
HETATM 28 C C01 JC1 . . . C 3 14.671 0.106 18.993 1 24.94 ? C01 JC1 1 A 1 
HETATM 29 O O01 JC1 . . . C 3 14.117 -0.901 18.15 1 34.28 ? O01 JC1 1 A 1 
HETATM 30 C C10 JC1 . . . C 3 14.032 0.06 20.432 1 22.79 ? C10 JC1 1 A 1 
HETATM 31 C C19 JC1 . . . C 3 13.237 -1.041 20.801 1 34.23 ? C19 JC1 1 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           267 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           31 
#