data_2ZZ6 # _model_server_result.job_id xaWSgqJ8-3hkvXHlfH9keQ _model_server_result.datetime_utc '2024-11-23 16:23:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2zz6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":311}' # _entry.id 2ZZ6 # _exptl.entry_id 2ZZ6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 119.31 _cell.angle_gamma 90 _cell.entry_id 2ZZ6 _cell.length_a 57.931 _cell.length_b 73.692 _cell.length_c 59.147 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ZZ6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NZ LYS 75 A LYS 72 1_555 C C6 6AZ . A 6AZ 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.416 ? covale ? covale2 B NZ LYS 75 B LYS 72 1_555 G C6 6AZ . B 6AZ 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.456 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 166 n n C1 C2 GOL sing 167 n n C1 H11 GOL sing 168 n n C1 H12 GOL sing 169 n n O1 HO1 GOL sing 170 n n C2 O2 GOL sing 171 n n C2 C3 GOL sing 172 n n C2 H2 GOL sing 173 n n O2 HO2 GOL sing 174 n n C3 O3 GOL sing 175 n n C3 H31 GOL sing 176 n n C3 H32 GOL sing 177 n n O3 HO3 GOL sing 178 n n # _atom_sites.entry_id 2ZZ6 _atom_sites.fract_transf_matrix[1][1] 0.017262 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.009691 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01357 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019389 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 6AZ A 1 301 301 6AZ 6AZ . D 3 GOL A 1 311 311 GOL GOL . E 3 GOL A 1 312 312 GOL GOL . F 3 GOL A 1 314 314 GOL GOL . G 2 6AZ B 1 302 302 6AZ 6AZ . H 3 GOL B 1 313 313 GOL GOL . I 4 HOH A 1 402 402 HOH HOH . I 4 HOH A 2 403 403 HOH HOH . I 4 HOH A 3 404 404 HOH HOH . I 4 HOH A 4 405 405 HOH HOH . I 4 HOH A 5 406 406 HOH HOH . I 4 HOH A 6 407 407 HOH HOH . I 4 HOH A 7 408 408 HOH HOH . I 4 HOH A 8 409 409 HOH HOH . I 4 HOH A 9 411 411 HOH HOH . I 4 HOH A 10 413 413 HOH HOH . I 4 HOH A 11 421 421 HOH HOH . I 4 HOH A 12 430 430 HOH HOH . I 4 HOH A 13 432 432 HOH HOH . I 4 HOH A 14 434 434 HOH HOH . I 4 HOH A 15 451 451 HOH HOH . I 4 HOH A 16 472 472 HOH HOH . I 4 HOH A 17 473 473 HOH HOH . I 4 HOH A 18 501 501 HOH HOH . I 4 HOH A 19 503 503 HOH HOH . I 4 HOH A 20 507 507 HOH HOH . I 4 HOH A 21 508 508 HOH HOH . I 4 HOH A 22 510 510 HOH HOH . I 4 HOH A 23 513 513 HOH HOH . I 4 HOH A 24 515 515 HOH HOH . I 4 HOH A 25 517 517 HOH HOH . I 4 HOH A 26 518 518 HOH HOH . I 4 HOH A 27 519 519 HOH HOH . I 4 HOH A 28 520 520 HOH HOH . I 4 HOH A 29 522 522 HOH HOH . I 4 HOH A 30 523 523 HOH HOH . I 4 HOH A 31 525 525 HOH HOH . I 4 HOH A 32 527 527 HOH HOH . I 4 HOH A 33 528 528 HOH HOH . I 4 HOH A 34 529 529 HOH HOH . I 4 HOH A 35 532 532 HOH HOH . I 4 HOH A 36 534 534 HOH HOH . I 4 HOH A 37 535 535 HOH HOH . I 4 HOH A 38 537 537 HOH HOH . I 4 HOH A 39 539 539 HOH HOH . I 4 HOH A 40 540 540 HOH HOH . I 4 HOH A 41 545 545 HOH HOH . I 4 HOH A 42 546 546 HOH HOH . I 4 HOH A 43 547 547 HOH HOH . I 4 HOH A 44 548 548 HOH HOH . I 4 HOH A 45 551 551 HOH HOH . I 4 HOH A 46 552 552 HOH HOH . I 4 HOH A 47 554 554 HOH HOH . I 4 HOH A 48 561 561 HOH HOH . I 4 HOH A 49 564 564 HOH HOH . I 4 HOH A 50 566 566 HOH HOH . I 4 HOH A 51 569 569 HOH HOH . I 4 HOH A 52 570 570 HOH HOH . I 4 HOH A 53 571 571 HOH HOH . I 4 HOH A 54 573 573 HOH HOH . I 4 HOH A 55 574 574 HOH HOH . I 4 HOH A 56 577 577 HOH HOH . I 4 HOH A 57 578 578 HOH HOH . I 4 HOH A 58 579 579 HOH HOH . I 4 HOH A 59 580 580 HOH HOH . I 4 HOH A 60 581 581 HOH HOH . I 4 HOH A 61 584 584 HOH HOH . I 4 HOH A 62 585 585 HOH HOH . I 4 HOH A 63 586 586 HOH HOH . I 4 HOH A 64 587 587 HOH HOH . I 4 HOH A 65 588 588 HOH HOH . I 4 HOH A 66 592 592 HOH HOH . I 4 HOH A 67 595 595 HOH HOH . I 4 HOH A 68 597 597 HOH HOH . I 4 HOH A 69 600 600 HOH HOH . I 4 HOH A 70 601 601 HOH HOH . I 4 HOH A 71 604 604 HOH HOH . I 4 HOH A 72 609 609 HOH HOH . I 4 HOH A 73 612 612 HOH HOH . I 4 HOH A 74 613 613 HOH HOH . I 4 HOH A 75 614 614 HOH HOH . I 4 HOH A 76 616 616 HOH HOH . I 4 HOH A 77 617 617 HOH HOH . I 4 HOH A 78 618 618 HOH HOH . I 4 HOH A 79 619 619 HOH HOH . I 4 HOH A 80 620 620 HOH HOH . I 4 HOH A 81 622 622 HOH HOH . I 4 HOH A 82 624 624 HOH HOH . I 4 HOH A 83 625 625 HOH HOH . I 4 HOH A 84 628 628 HOH HOH . I 4 HOH A 85 630 630 HOH HOH . I 4 HOH A 86 631 631 HOH HOH . I 4 HOH A 87 637 637 HOH HOH . I 4 HOH A 88 638 638 HOH HOH . I 4 HOH A 89 640 640 HOH HOH . I 4 HOH A 90 645 645 HOH HOH . I 4 HOH A 91 646 646 HOH HOH . I 4 HOH A 92 647 647 HOH HOH . I 4 HOH A 93 651 651 HOH HOH . I 4 HOH A 94 652 652 HOH HOH . I 4 HOH A 95 654 654 HOH HOH . I 4 HOH A 96 659 659 HOH HOH . I 4 HOH A 97 662 662 HOH HOH . I 4 HOH A 98 664 664 HOH HOH . I 4 HOH A 99 671 671 HOH HOH . I 4 HOH A 100 673 673 HOH HOH . I 4 HOH A 101 675 675 HOH HOH . I 4 HOH A 102 676 676 HOH HOH . I 4 HOH A 103 678 678 HOH HOH . I 4 HOH A 104 679 679 HOH HOH . I 4 HOH A 105 680 680 HOH HOH . I 4 HOH A 106 683 683 HOH HOH . I 4 HOH A 107 684 684 HOH HOH . I 4 HOH A 108 686 686 HOH HOH . I 4 HOH A 109 687 687 HOH HOH . I 4 HOH A 110 688 688 HOH HOH . I 4 HOH A 111 690 690 HOH HOH . I 4 HOH A 112 693 693 HOH HOH . I 4 HOH A 113 694 694 HOH HOH . I 4 HOH A 114 697 697 HOH HOH . I 4 HOH A 115 698 698 HOH HOH . I 4 HOH A 116 701 701 HOH HOH . I 4 HOH A 117 703 703 HOH HOH . I 4 HOH A 118 707 707 HOH HOH . I 4 HOH A 119 709 709 HOH HOH . I 4 HOH A 120 711 711 HOH HOH . I 4 HOH A 121 712 712 HOH HOH . I 4 HOH A 122 713 713 HOH HOH . I 4 HOH A 123 714 714 HOH HOH . I 4 HOH A 124 715 715 HOH HOH . I 4 HOH A 125 718 718 HOH HOH . I 4 HOH A 126 721 721 HOH HOH . I 4 HOH A 127 722 722 HOH HOH . I 4 HOH A 128 725 725 HOH HOH . I 4 HOH A 129 726 726 HOH HOH . I 4 HOH A 130 729 729 HOH HOH . I 4 HOH A 131 730 730 HOH HOH . I 4 HOH A 132 731 731 HOH HOH . I 4 HOH A 133 734 734 HOH HOH . I 4 HOH A 134 735 735 HOH HOH . I 4 HOH A 135 736 736 HOH HOH . I 4 HOH A 136 737 737 HOH HOH . I 4 HOH A 137 740 740 HOH HOH . I 4 HOH A 138 742 742 HOH HOH . I 4 HOH A 139 744 744 HOH HOH . I 4 HOH A 140 745 745 HOH HOH . I 4 HOH A 141 746 746 HOH HOH . J 4 HOH B 1 401 401 HOH HOH . J 4 HOH B 2 410 410 HOH HOH . J 4 HOH B 3 412 412 HOH HOH . J 4 HOH B 4 414 414 HOH HOH . J 4 HOH B 5 422 422 HOH HOH . J 4 HOH B 6 423 423 HOH HOH . J 4 HOH B 7 424 424 HOH HOH . J 4 HOH B 8 425 425 HOH HOH . J 4 HOH B 9 426 426 HOH HOH . J 4 HOH B 10 427 427 HOH HOH . J 4 HOH B 11 428 428 HOH HOH . J 4 HOH B 12 429 429 HOH HOH . J 4 HOH B 13 431 431 HOH HOH . J 4 HOH B 14 433 433 HOH HOH . J 4 HOH B 15 471 471 HOH HOH . J 4 HOH B 16 474 474 HOH HOH . J 4 HOH B 17 502 502 HOH HOH . J 4 HOH B 18 504 504 HOH HOH . J 4 HOH B 19 505 505 HOH HOH . J 4 HOH B 20 506 506 HOH HOH . J 4 HOH B 21 509 509 HOH HOH . J 4 HOH B 22 511 511 HOH HOH . J 4 HOH B 23 512 512 HOH HOH . J 4 HOH B 24 514 514 HOH HOH . J 4 HOH B 25 516 516 HOH HOH . J 4 HOH B 26 521 521 HOH HOH . J 4 HOH B 27 524 524 HOH HOH . J 4 HOH B 28 526 526 HOH HOH . J 4 HOH B 29 530 530 HOH HOH . J 4 HOH B 30 531 531 HOH HOH . J 4 HOH B 31 533 533 HOH HOH . J 4 HOH B 32 536 536 HOH HOH . J 4 HOH B 33 538 538 HOH HOH . J 4 HOH B 34 541 541 HOH HOH . J 4 HOH B 35 542 542 HOH HOH . J 4 HOH B 36 543 543 HOH HOH . J 4 HOH B 37 544 544 HOH HOH . J 4 HOH B 38 549 549 HOH HOH . J 4 HOH B 39 550 550 HOH HOH . J 4 HOH B 40 553 553 HOH HOH . J 4 HOH B 41 555 555 HOH HOH . J 4 HOH B 42 556 556 HOH HOH . J 4 HOH B 43 557 557 HOH HOH . J 4 HOH B 44 558 558 HOH HOH . J 4 HOH B 45 559 559 HOH HOH . J 4 HOH B 46 560 560 HOH HOH . J 4 HOH B 47 562 562 HOH HOH . J 4 HOH B 48 563 563 HOH HOH . J 4 HOH B 49 565 565 HOH HOH . J 4 HOH B 50 567 567 HOH HOH . J 4 HOH B 51 568 568 HOH HOH . J 4 HOH B 52 572 572 HOH HOH . J 4 HOH B 53 575 575 HOH HOH . J 4 HOH B 54 576 576 HOH HOH . J 4 HOH B 55 582 582 HOH HOH . J 4 HOH B 56 583 583 HOH HOH . J 4 HOH B 57 589 589 HOH HOH . J 4 HOH B 58 590 590 HOH HOH . J 4 HOH B 59 591 591 HOH HOH . J 4 HOH B 60 593 593 HOH HOH . J 4 HOH B 61 594 594 HOH HOH . J 4 HOH B 62 596 596 HOH HOH . J 4 HOH B 63 598 598 HOH HOH . J 4 HOH B 64 599 599 HOH HOH . J 4 HOH B 65 602 602 HOH HOH . J 4 HOH B 66 603 603 HOH HOH . J 4 HOH B 67 605 605 HOH HOH . J 4 HOH B 68 606 606 HOH HOH . J 4 HOH B 69 607 607 HOH HOH . J 4 HOH B 70 608 608 HOH HOH . J 4 HOH B 71 610 610 HOH HOH . J 4 HOH B 72 611 611 HOH HOH . J 4 HOH B 73 615 615 HOH HOH . J 4 HOH B 74 621 621 HOH HOH . J 4 HOH B 75 623 623 HOH HOH . J 4 HOH B 76 626 626 HOH HOH . J 4 HOH B 77 627 627 HOH HOH . J 4 HOH B 78 629 629 HOH HOH . J 4 HOH B 79 632 632 HOH HOH . J 4 HOH B 80 633 633 HOH HOH . J 4 HOH B 81 634 634 HOH HOH . J 4 HOH B 82 635 635 HOH HOH . J 4 HOH B 83 636 636 HOH HOH . J 4 HOH B 84 639 639 HOH HOH . J 4 HOH B 85 641 641 HOH HOH . J 4 HOH B 86 642 642 HOH HOH . J 4 HOH B 87 643 643 HOH HOH . J 4 HOH B 88 644 644 HOH HOH . J 4 HOH B 89 648 648 HOH HOH . J 4 HOH B 90 649 649 HOH HOH . J 4 HOH B 91 650 650 HOH HOH . J 4 HOH B 92 653 653 HOH HOH . J 4 HOH B 93 655 655 HOH HOH . J 4 HOH B 94 656 656 HOH HOH . J 4 HOH B 95 657 657 HOH HOH . J 4 HOH B 96 658 658 HOH HOH . J 4 HOH B 97 660 660 HOH HOH . J 4 HOH B 98 661 661 HOH HOH . J 4 HOH B 99 663 663 HOH HOH . J 4 HOH B 100 665 665 HOH HOH . J 4 HOH B 101 666 666 HOH HOH . J 4 HOH B 102 667 667 HOH HOH . J 4 HOH B 103 668 668 HOH HOH . J 4 HOH B 104 669 669 HOH HOH . J 4 HOH B 105 670 670 HOH HOH . J 4 HOH B 106 672 672 HOH HOH . J 4 HOH B 107 674 674 HOH HOH . J 4 HOH B 108 677 677 HOH HOH . J 4 HOH B 109 681 681 HOH HOH . J 4 HOH B 110 682 682 HOH HOH . J 4 HOH B 111 685 685 HOH HOH . J 4 HOH B 112 689 689 HOH HOH . J 4 HOH B 113 691 691 HOH HOH . J 4 HOH B 114 692 692 HOH HOH . J 4 HOH B 115 695 695 HOH HOH . J 4 HOH B 116 696 696 HOH HOH . J 4 HOH B 117 699 699 HOH HOH . J 4 HOH B 118 700 700 HOH HOH . J 4 HOH B 119 702 702 HOH HOH . J 4 HOH B 120 704 704 HOH HOH . J 4 HOH B 121 705 705 HOH HOH . J 4 HOH B 122 706 706 HOH HOH . J 4 HOH B 123 708 708 HOH HOH . J 4 HOH B 124 710 710 HOH HOH . J 4 HOH B 125 716 716 HOH HOH . J 4 HOH B 126 717 717 HOH HOH . J 4 HOH B 127 719 719 HOH HOH . J 4 HOH B 128 720 720 HOH HOH . J 4 HOH B 129 723 723 HOH HOH . J 4 HOH B 130 724 724 HOH HOH . J 4 HOH B 131 727 727 HOH HOH . J 4 HOH B 132 728 728 HOH HOH . J 4 HOH B 133 732 732 HOH HOH . J 4 HOH B 134 733 733 HOH HOH . J 4 HOH B 135 738 738 HOH HOH . J 4 HOH B 136 739 739 HOH HOH . J 4 HOH B 137 741 741 HOH HOH . J 4 HOH B 138 743 743 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 3 8.497 -17.62 -3.209 1 38.75 ? C1 GOL 311 A 1 HETATM 2 O O1 GOL . . . D 3 9.887 -17.321 -3.041 1 31.98 ? O1 GOL 311 A 1 HETATM 3 C C2 GOL . . . D 3 8.125 -19.099 -3.199 1 40.45 ? C2 GOL 311 A 1 HETATM 4 O O2 GOL . . . D 3 9.245 -19.983 -2.92 1 37.49 ? O2 GOL 311 A 1 HETATM 5 C C3 GOL . . . D 3 7.478 -19.429 -4.538 1 41.56 ? C3 GOL 311 A 1 HETATM 6 O O3 GOL . . . D 3 7.1 -20.784 -4.647 1 46.59 ? O3 GOL 311 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #